RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 C1orf134Q5TEV5 83 aa2.81□□□□□ -1.96
CDC42BPA-213ENST00000488131 MUC6Q6W4X9 2439 aa2.8□□□□□ -1.96
CDC42BPA-213ENST00000488131 ZNF706Q9Y5V0 76 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-213ENST00000488131 NAV2Q8IVL1 2488 aa2.79□□□□□ -1.96
CDC42BPA-213ENST00000488131 HIVEP2P31629 2446 aa2.79□□□□□ -1.96
CDC42BPA-213ENST00000488131 IGHV6-1A0A0B4J1U7 121 aa2.79□□□□□ -1.96
CDC42BPA-213ENST00000488131 DEFB113Q30KQ7 82 aa2.79□□□□□ -1.96
CDC42BPA-213ENST00000488131 KRTAP25-1Q3LHN0 102 aa2.79□□□□□ -1.96
CDC42BPA-213ENST00000488131 Q5W150 140 aa2.78□□□□□ -1.96
CDC42BPA-213ENST00000488131 CHD8Q9HCK8 2581 aa2.78□□□□□ -1.96
CDC42BPA-213ENST00000488131 UNC79Q9P2D8 2635 aa2.78□□□□□ -1.96
CDC42BPA-213ENST00000488131 IGLV7-43P04211 117 aa2.77□□□□□ -1.97
CDC42BPA-213ENST00000488131 HIVEP1P15822 2718 aa2.77□□□□□ -1.97
CDC42BPA-213ENST00000488131 CASC10Q5T4H9 136 aa2.77□□□□□ -1.97
CDC42BPA-213ENST00000488131 KRTAP13-1Q8IUC0 172 aa2.77□□□□□ -1.97
CDC42BPA-213ENST00000488131 A0A096LNI7 61 aa2.77□□□□□ -1.97
CDC42BPA-213ENST00000488131 CHTF8P0CG12 524 aa2.77□□□□□ -1.97
CDC42BPA-213ENST00000488131 KRTAP10-3P60369 221 aa2.77□□□□□ -1.97
CDC42BPA-213ENST00000488131 SONP18583 2426 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-213ENST00000488131 POLQO75417 2590 aa2.76□□□□□ -1.97
CDC42BPA-213ENST00000488131 F8P00451 2351 aa2.76□□□□□ -1.97
CDC42BPA-213ENST00000488131 SETD2Q9BYW2 2564 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-213ENST00000488131 A8MUU9 505 aa2.76□□□□□ -1.97
CDC42BPA-213ENST00000488131 K7EIL1 84 aa2.76□□□□□ -1.97
CDC42BPA-213ENST00000488131 LINC00483Q53H64 154 aa2.76□□□□□ -1.97
CDC42BPA-213ENST00000488131 FLNCQ14315 2725 aa2.76□□□□□ -1.97
CDC42BPA-213ENST00000488131 KMT2BQ9UMN6 2715 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-213ENST00000488131 MT3P25713 68 aa2.75□□□□□ -1.97
CDC42BPA-213ENST00000488131 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
CDC42BPA-213ENST00000488131 MTORP42345 2549 aa2.75□□□□□ -1.97
CDC42BPA-213ENST00000488131 ITPR3Q14573 2671 aa2.75□□□□□ -1.97
CDC42BPA-213ENST00000488131 PKD1L2Q7Z442 2459 aa2.73□□□□□ -1.97
CDC42BPA-213ENST00000488131 CCDC168Q8NDH2 2452 aa2.73□□□□□ -1.97
CDC42BPA-213ENST00000488131 LY6G6CO95867 125 aa2.72□□□□□ -1.97
CDC42BPA-213ENST00000488131 P0C880 135 aa2.72□□□□□ -1.97
CDC42BPA-213ENST00000488131 PIEZO1Q92508 2521 aa2.72□□□□□ -1.97
CDC42BPA-213ENST00000488131 ZNF469Q96JG9 3925 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-213ENST00000488131 ACACBO00763 2458 aa2.72□□□□□ -1.97
CDC42BPA-213ENST00000488131 CENPEQ02224 2701 aa2.72□□□□□ -1.97
CDC42BPA-213ENST00000488131 LINC00304Q8N9R0 145 aa2.71□□□□□ -1.98
CDC42BPA-213ENST00000488131 VWFP04275 2813 aa2.71□□□□□ -1.98
CDC42BPA-213ENST00000488131 SRRM2Q9UQ35 2752 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-213ENST00000488131 FLNAP21333 2647 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-213ENST00000488131 H0YAA0 97 aa2.7□□□□□ -1.98
CDC42BPA-213ENST00000488131 C14orf177Q52M58 125 aa2.7□□□□□ -1.98
CDC42BPA-213ENST00000488131 BAHCC1Q9P281 2608 aa2.7□□□□□ -1.98
CDC42BPA-213ENST00000488131 ABCA12Q86UK0 2595 aa2.7□□□□□ -1.98
CDC42BPA-213ENST00000488131 MYO18BQ8IUG5 2567 aa2.69□□□□□ -1.98
CDC42BPA-213ENST00000488131 PKD1L1Q8TDX9 2849 aa2.68□□□□□ -1.98
CDC42BPA-213ENST00000488131 Q6ZSA8 131 aa2.67□□□□□ -1.98
CDC42BPA-213ENST00000488131 ANAPC11Q9NYG5 84 aa2.67□□□□□ -1.98
CDC42BPA-213ENST00000488131 UBR5O95071 2799 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-213ENST00000488131 PANO1I0J062 215 aa2.67□□□□□ -1.98
CDC42BPA-213ENST00000488131 ZNF462Q96JM2 2506 aa2.66□□□□□ -1.98
CDC42BPA-213ENST00000488131 FAM208BQ5VWN6 2430 aa2.66□□□□□ -1.98
CDC42BPA-213ENST00000488131 KRTAP16-1A8MUX0 517 aa2.66□□□□□ -1.98
CDC42BPA-213ENST00000488131 TENM3Q9P273 2699 aa2.66□□□□□ -1.98
CDC42BPA-213ENST00000488131 IGSF10Q6WRI0 2623 aa2.66□□□□□ -1.98
CDC42BPA-213ENST00000488131 KRTAP5-8O75690 187 aa2.65□□□□□ -1.98
CDC42BPA-213ENST00000488131 TRRAPQ9Y4A5 3859 aa2.65□□□□□ -1.98
CDC42BPA-213ENST00000488131 CSMD3Q7Z407 3707 aa2.65□□□□□ -1.99
CDC42BPA-213ENST00000488131 NUPR2A6NF83 97 aa2.65□□□□□ -1.99
CDC42BPA-213ENST00000488131 ANK2Q01484 3957 aa2.64□□□□□ -1.99
CDC42BPA-213ENST00000488131 DNAH10Q8IVF4 4471 aa2.64□□□□□ -1.99
CDC42BPA-213ENST00000488131 A0A087WTM6 91 aa2.64□□□□□ -1.99
CDC42BPA-213ENST00000488131 KRTAP4-3Q9BYR4 195 aa2.64□□□□□ -1.99
CDC42BPA-213ENST00000488131 CACNA1AO00555 2505 aa2.63□□□□□ -1.99
CDC42BPA-213ENST00000488131 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
CDC42BPA-213ENST00000488131 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
CDC42BPA-213ENST00000488131 SPINK6Q6UWN8 80 aa2.63□□□□□ -1.99
CDC42BPA-213ENST00000488131 SPACA4Q8TDM5 124 aa2.63□□□□□ -1.99
CDC42BPA-213ENST00000488131 PSORS1C2Q9UIG4 136 aa2.63□□□□□ -1.99
CDC42BPA-213ENST00000488131 TENM4Q6N022 2769 aa2.63□□□□□ -1.99
CDC42BPA-213ENST00000488131 NOTCH2Q04721 2471 aa2.63□□□□□ -1.99
CDC42BPA-213ENST00000488131 LYSTQ99698 3801 aa2.63□□□□□ -1.99
CDC42BPA-213ENST00000488131 HECTD1Q9ULT8 2610 aa2.63□□□□□ -1.99
CDC42BPA-213ENST00000488131 H1FX-AS1Q4G0G2 97 aa2.62□□□□□ -1.99
CDC42BPA-213ENST00000488131 DNAH8Q96JB1 4490 aa2.62□□□□□ -1.99
CDC42BPA-213ENST00000488131 A0A1B0GU33 70 aa2.62□□□□□ -1.99
CDC42BPA-213ENST00000488131 C20orf166-AS1Q96NR2 134 aa2.62□□□□□ -1.99
CDC42BPA-213ENST00000488131 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
CDC42BPA-213ENST00000488131 FBN1P35555 2871 aaKnown RBP2.62□□□□□ -1.99
CDC42BPA-213ENST00000488131 HELZ2Q9BYK8 2649 aaKnown RBP2.62□□□□□ -1.99
CDC42BPA-213ENST00000488131 TEP1Q99973 2627 aaKnown RBP2.61□□□□□ -1.99
CDC42BPA-213ENST00000488131 TENM1Q9UKZ4 2725 aa2.61□□□□□ -1.99
CDC42BPA-213ENST00000488131 KRTAP10-5P60370 271 aa2.61□□□□□ -1.99
CDC42BPA-213ENST00000488131 ACANP16112 2415 aa2.61□□□□□ -1.99
CDC42BPA-213ENST00000488131 K7ERS5 55 aa2.6□□□□□ -1.99
CDC42BPA-213ENST00000488131 SSBP3-AS1Q7Z2R9 100 aa2.6□□□□□ -1.99
CDC42BPA-213ENST00000488131 DNAH9Q9NYC9 4486 aa2.6□□□□□ -1.99
CDC42BPA-213ENST00000488131 TYMSOSQ8TAI1 123 aa2.6□□□□□ -1.99
CDC42BPA-213ENST00000488131 PDZD2O15018 2839 aa2.6□□□□□ -1.99
CDC42BPA-213ENST00000488131 DNAH3Q8TD57 4116 aa2.59□□□□□ -1.99
CDC42BPA-213ENST00000488131 SPINK1P00995 79 aa2.58□□□□□ -2
CDC42BPA-213ENST00000488131 SPINT4Q6UDR6 99 aa2.57□□□□□ -2
CDC42BPA-213ENST00000488131 Q6ZRN7 208 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-213ENST00000488131 CIRBP-AS1Q8TBR5 109 aa2.57□□□□□ -2
CDC42BPA-213ENST00000488131 MEGF8Q7Z7M0 2845 aa2.57□□□□□ -2
CDC42BPA-213ENST00000488131 FRAS1Q86XX4 4008 aa2.57□□□□□ -2
CDC42BPA-213ENST00000488131 TPRXLQ17RH7 258 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms