RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 C22orf24Q9Y442 160 aa3.73□□□□□ -1.81
TNFSF4-203ENST00000488053 MUC17Q685J3 4493 aa3.73□□□□□ -1.81
TNFSF4-203ENST00000488053 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
TNFSF4-203ENST00000488053 TSPEAR-AS2P59090 65 aa3.72□□□□□ -1.81
TNFSF4-203ENST00000488053 RBM3P98179 157 aaKnown RBP3.72□□□□□ -1.81
TNFSF4-203ENST00000488053 C20orf197Q8N268 126 aa3.72□□□□□ -1.81
TNFSF4-203ENST00000488053 CYSTM1Q9H1C7 97 aa3.72□□□□□ -1.81
TNFSF4-203ENST00000488053 IGKV3D-7A0A0C4DH55 119 aa3.71□□□□□ -1.82
TNFSF4-203ENST00000488053 RPL37AP8A6NKH3 93 aa3.71□□□□□ -1.82
TNFSF4-203ENST00000488053 H0YGX0 51 aa3.71□□□□□ -1.82
TNFSF4-203ENST00000488053 H7BZZ5 65 aa3.71□□□□□ -1.82
TNFSF4-203ENST00000488053 CCKP06307 115 aa3.71□□□□□ -1.82
TNFSF4-203ENST00000488053 FP248Q71RG6 208 aaPredicted RBP3.71□□□□□ -1.82
TNFSF4-203ENST00000488053 ANAPC11Q9NYG5 84 aa3.71□□□□□ -1.82
TNFSF4-203ENST00000488053 TRAV13-2A0A0B4J235 113 aa3.7□□□□□ -1.82
TNFSF4-203ENST00000488053 Q8IZM0 81 aa3.7□□□□□ -1.82
TNFSF4-203ENST00000488053 TYMSOSQ8TAI1 123 aa3.7□□□□□ -1.82
TNFSF4-203ENST00000488053 RETNLBQ9BQ08 111 aa3.7□□□□□ -1.82
TNFSF4-203ENST00000488053 CDKN2A-AS1Q9UH64 79 aa3.7□□□□□ -1.82
TNFSF4-203ENST00000488053 JMJD7-PLA2G4BH0Y9G9 81 aa3.69□□□□□ -1.82
TNFSF4-203ENST00000488053 RPL28P46779 137 aaKnown RBP3.69□□□□□ -1.82
TNFSF4-203ENST00000488053 OBSCN-AS1Q96MR7 158 aa3.69□□□□□ -1.82
TNFSF4-203ENST00000488053 UBL5Q9BZL1 73 aa3.69□□□□□ -1.82
TNFSF4-203ENST00000488053 NDUFA12Q9UI09 145 aa3.69□□□□□ -1.82
TNFSF4-203ENST00000488053 ERC2-IT1O76042 136 aa3.68□□□□□ -1.82
TNFSF4-203ENST00000488053 LINC00167Q96N53 147 aa3.68□□□□□ -1.82
TNFSF4-203ENST00000488053 F8WEM9 126 aa3.67□□□□□ -1.82
TNFSF4-203ENST00000488053 UBE2AP49459 152 aa3.67□□□□□ -1.82
TNFSF4-203ENST00000488053 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
TNFSF4-203ENST00000488053 FAM19A3Q7Z5A8 133 aa3.67□□□□□ -1.82
TNFSF4-203ENST00000488053 LINC00846Q9NV44 126 aa3.67□□□□□ -1.82
TNFSF4-203ENST00000488053 IGKV2-28A0A075B6P5 120 aa3.66□□□□□ -1.82
TNFSF4-203ENST00000488053 TRAV23DV6A0A075B6W5 121 aa3.66□□□□□ -1.82
TNFSF4-203ENST00000488053 A0A087WVE0 104 aa3.66□□□□□ -1.82
TNFSF4-203ENST00000488053 NDUFS5O43920 106 aa3.66□□□□□ -1.82
TNFSF4-203ENST00000488053 IGKV2D-28P01615 120 aa3.66□□□□□ -1.82
TNFSF4-203ENST00000488053 PRLHP81277 87 aa3.66□□□□□ -1.82
TNFSF4-203ENST00000488053 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
TNFSF4-203ENST00000488053 NKAPP1Q8N9T2 125 aa3.66□□□□□ -1.82
TNFSF4-203ENST00000488053 COX7B2Q8TF08 81 aa3.66□□□□□ -1.82
TNFSF4-203ENST00000488053 LINC00304Q8N9R0 145 aa3.65□□□□□ -1.83
TNFSF4-203ENST00000488053 LINC00308Q8TCZ7 52 aa3.65□□□□□ -1.83
TNFSF4-203ENST00000488053 H3BQ85 93 aa3.64□□□□□ -1.83
TNFSF4-203ENST00000488053 Q1T7F1 81 aa3.64□□□□□ -1.83
TNFSF4-203ENST00000488053 KRTAP13-1Q8IUC0 172 aa3.64□□□□□ -1.83
TNFSF4-203ENST00000488053 C14orf132Q9NPU4 83 aa3.64□□□□□ -1.83
TNFSF4-203ENST00000488053 ORMDL1Q9P0S3 153 aa3.64□□□□□ -1.83
TNFSF4-203ENST00000488053 PDE6GP18545 87 aa3.63□□□□□ -1.83
TNFSF4-203ENST00000488053 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
TNFSF4-203ENST00000488053 TMEM256-PLSCR3K7ERE1 68 aa3.62□□□□□ -1.83
TNFSF4-203ENST00000488053 CXCL6P80162 114 aa3.62□□□□□ -1.83
TNFSF4-203ENST00000488053 FAM229BQ4G0N7 80 aa3.62□□□□□ -1.83
TNFSF4-203ENST00000488053 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
TNFSF4-203ENST00000488053 ZNF625Q96I27 306 aaPredicted RBP3.62□□□□□ -1.83
TNFSF4-203ENST00000488053 TPRXLQ17RH7 258 aa3.61□□□□□ -1.83
TNFSF4-203ENST00000488053 Q8NDZ9 215 aa3.61□□□□□ -1.83
TNFSF4-203ENST00000488053 SND1-IT1Q9HBX3 110 aa3.61□□□□□ -1.83
TNFSF4-203ENST00000488053 M0R378 163 aa3.6□□□□□ -1.83
TNFSF4-203ENST00000488053 HIGD2AQ9BW72 106 aa3.6□□□□□ -1.83
TNFSF4-203ENST00000488053 RBM12B-AS1Q9P1G2 102 aa3.59□□□□□ -1.83
TNFSF4-203ENST00000488053 SNURFQ9Y675 71 aa3.59□□□□□ -1.83
TNFSF4-203ENST00000488053 TRBV7-4A0A0J9YYF1 115 aa3.58□□□□□ -1.84
TNFSF4-203ENST00000488053 NREPQ16612 68 aa3.58□□□□□ -1.84
TNFSF4-203ENST00000488053 SOSTDC1Q6X4U4 206 aa3.58□□□□□ -1.84
TNFSF4-203ENST00000488053 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
TNFSF4-203ENST00000488053 TMEM254Q8TBM7 123 aa3.58□□□□□ -1.84
TNFSF4-203ENST00000488053 LOC110117498A0A087WWA1 95 aa3.57□□□□□ -1.84
TNFSF4-203ENST00000488053 NCR3O14931 201 aa3.57□□□□□ -1.84
TNFSF4-203ENST00000488053 LINC00158P58513 81 aa3.57□□□□□ -1.84
TNFSF4-203ENST00000488053 SPRR4Q96PI1 79 aa3.57□□□□□ -1.84
TNFSF4-203ENST00000488053 hDV103S1A0JD37 113 aa3.56□□□□□ -1.84
TNFSF4-203ENST00000488053 COX17Q14061 63 aa3.56□□□□□ -1.84
TNFSF4-203ENST00000488053 ATP11AUNQ6ZP68 121 aa3.56□□□□□ -1.84
TNFSF4-203ENST00000488053 LINC00337Q8N6G1 96 aa3.56□□□□□ -1.84
TNFSF4-203ENST00000488053 SMIM11BQ8TCY0 68 aa3.56□□□□□ -1.84
TNFSF4-203ENST00000488053 CYP4F30PQ9H0H9 118 aa3.56□□□□□ -1.84
TNFSF4-203ENST00000488053 KRTAP13-3Q3SY46 172 aa3.55□□□□□ -1.84
TNFSF4-203ENST00000488053 SPAG11AQ6PDA7 123 aa3.55□□□□□ -1.84
TNFSF4-203ENST00000488053 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
TNFSF4-203ENST00000488053 BPY2O14599 106 aa3.54□□□□□ -1.84
TNFSF4-203ENST00000488053 LCA10Q71F78 164 aa3.54□□□□□ -1.84
TNFSF4-203ENST00000488053 LIMD2Q9BT23 127 aa3.54□□□□□ -1.84
TNFSF4-203ENST00000488053 ZNF706Q9Y5V0 76 aaPredicted RBP3.54□□□□□ -1.84
TNFSF4-203ENST00000488053 ETDCA0A1B0GVM5 59 aa3.53□□□□□ -1.84
TNFSF4-203ENST00000488053 ZNF73O43830 326 aaPredicted RBP3.53□□□□□ -1.84
TNFSF4-203ENST00000488053 ASB16-AS1Q495Z4 193 aa3.53□□□□□ -1.84
TNFSF4-203ENST00000488053 Q6ZQT0 140 aa3.53□□□□□ -1.84
TNFSF4-203ENST00000488053 NDUFB1O75438 58 aa3.52□□□□□ -1.85
TNFSF4-203ENST00000488053 MOBPQ13875 183 aa3.52□□□□□ -1.85
TNFSF4-203ENST00000488053 DHRS4-AS1Q9P1J3 65 aa3.52□□□□□ -1.85
TNFSF4-203ENST00000488053 TRAV22A0A0B4J277 110 aa3.51□□□□□ -1.85
TNFSF4-203ENST00000488053 SPINK1P00995 79 aa3.51□□□□□ -1.85
TNFSF4-203ENST00000488053 SPRR1AP35321 89 aa3.51□□□□□ -1.85
TNFSF4-203ENST00000488053 ELOF1P60002 83 aaKnown RBP3.51□□□□□ -1.85
TNFSF4-203ENST00000488053 C7orf65Q6ZTY9 151 aa3.51□□□□□ -1.85
TNFSF4-203ENST00000488053 KCNQ1DNQ9H478 68 aa3.51□□□□□ -1.85
TNFSF4-203ENST00000488053 A8MU10 97 aa3.5□□□□□ -1.85
TNFSF4-203ENST00000488053 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
TNFSF4-203ENST00000488053 KRTAP4-16G5E9R7 235 aaPredicted RBP3.5□□□□□ -1.85
TNFSF4-203ENST00000488053 LINC00483Q53H64 154 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms