RNA–Protein interactions for RNA: ENST00000487846.1

TNIK-213, Transcript of TRAF2 and NCK interacting kinase, humanhuman

TSL 4

Gene TNIK, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-213ENST00000487846 SAMD9LQ8IVG5 1584 aa0.72□□□□□ -2.29
TNIK-213ENST00000487846 A8MTW9 85 aa0.72□□□□□ -2.29
TNIK-213ENST00000487846 MAP1BP46821 2468 aaKnown RBP0.72□□□□□ -2.29
TNIK-213ENST00000487846 HRNRQ86YZ3 2850 aaPredicted RBP0.71□□□□□ -2.3
TNIK-213ENST00000487846 CELSR1Q9NYQ6 3014 aa0.71□□□□□ -2.3
TNIK-213ENST00000487846 PKD1L2Q7Z442 2459 aa0.71□□□□□ -2.3
TNIK-213ENST00000487846 ACANP16112 2415 aa0.7□□□□□ -2.3
TNIK-213ENST00000487846 TENM3Q9P273 2699 aa0.7□□□□□ -2.3
TNIK-213ENST00000487846 MACF1Q9UPN3 7388 aaKnown RBP0.68□□□□□ -2.3
TNIK-213ENST00000487846 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
TNIK-213ENST00000487846 APC2O95996 2303 aa0.65□□□□□ -2.3
TNIK-213ENST00000487846 FAT4Q6V0I7 4981 aa0.65□□□□□ -2.31
TNIK-213ENST00000487846 IGSF10Q6WRI0 2623 aa0.65□□□□□ -2.31
TNIK-213ENST00000487846 CEP290O15078 2479 aa0.64□□□□□ -2.31
TNIK-213ENST00000487846 M0QZ58 72 aa0.64□□□□□ -2.31
TNIK-213ENST00000487846 WNK1Q9H4A3 2382 aa0.64□□□□□ -2.31
TNIK-213ENST00000487846 TNP1P09430 55 aa0.62□□□□□ -2.31
TNIK-213ENST00000487846 NSD1Q96L73 2696 aaPredicted RBP0.6□□□□□ -2.31
TNIK-213ENST00000487846 SPRR2AP35326 72 aa0.6□□□□□ -2.31
TNIK-213ENST00000487846 CLTCL1P53675 1640 aa0.6□□□□□ -2.31
TNIK-213ENST00000487846 LYSTQ99698 3801 aa0.59□□□□□ -2.32
TNIK-213ENST00000487846 FLNBO75369 2602 aaKnown RBP0.57□□□□□ -2.32
TNIK-213ENST00000487846 HSPG2P98160 4391 aa0.57□□□□□ -2.32
TNIK-213ENST00000487846 NF1P21359 2839 aa0.56□□□□□ -2.32
TNIK-213ENST00000487846 NBASA2RRP1 2371 aa0.56□□□□□ -2.32
TNIK-213ENST00000487846 DEFB110Q30KQ9 67 aa0.56□□□□□ -2.32
TNIK-213ENST00000487846 PKD1P98161 4303 aa0.55□□□□□ -2.32
TNIK-213ENST00000487846 SYNE2Q8WXH0 6885 aaKnown RBP0.55□□□□□ -2.32
TNIK-213ENST00000487846 MDN1Q9NU22 5596 aa0.53□□□□□ -2.32
TNIK-213ENST00000487846 KRTAP6-2Q3LI66 62 aa0.53□□□□□ -2.32
TNIK-213ENST00000487846 MUC5ACP98088 5654 aa0.53□□□□□ -2.32
TNIK-213ENST00000487846 DMBT1Q9UGM3 2413 aaPredicted RBP0.51□□□□□ -2.33
TNIK-213ENST00000487846 SPTBN4Q9H254 2564 aa0.5□□□□□ -2.33
TNIK-213ENST00000487846 DCHS2Q6V1P9 2916 aa0.49□□□□□ -2.33
TNIK-213ENST00000487846 MT1AP04731 61 aa0.49□□□□□ -2.33
TNIK-213ENST00000487846 FSIP2Q5CZC0 6907 aa0.49□□□□□ -2.33
TNIK-213ENST00000487846 HECTD4Q9Y4D8 3996 aa0.48□□□□□ -2.33
TNIK-213ENST00000487846 LRP1BQ9NZR2 4599 aa0.48□□□□□ -2.33
TNIK-213ENST00000487846 VPS13BQ7Z7G8 4022 aa0.48□□□□□ -2.33
TNIK-213ENST00000487846 POLR2KP53803 58 aaKnown RBP0.48□□□□□ -2.33
TNIK-213ENST00000487846 HMCN2Q8NDA2 5059 aa0.48□□□□□ -2.33
TNIK-213ENST00000487846 MAST4O15021 2626 aa0.47□□□□□ -2.33
TNIK-213ENST00000487846 STAB1Q9NY15 2570 aa0.47□□□□□ -2.33
TNIK-213ENST00000487846 SACSQ9NZJ4 4579 aa0.47□□□□□ -2.33
TNIK-213ENST00000487846 FLNCQ14315 2725 aa0.46□□□□□ -2.34
TNIK-213ENST00000487846 SONP18583 2426 aaKnown RBP0.46□□□□□ -2.34
TNIK-213ENST00000487846 SNRPGP62308 76 aaKnown RBP0.46□□□□□ -2.34
TNIK-213ENST00000487846 COL7A1Q02388 2944 aa0.46□□□□□ -2.34
TNIK-213ENST00000487846 CLPSL2Q6UWE3 100 aa0.45□□□□□ -2.34
TNIK-213ENST00000487846 COL6A3P12111 3177 aa0.45□□□□□ -2.34
TNIK-213ENST00000487846 SRRM2Q9UQ35 2752 aaKnown RBP0.45□□□□□ -2.34
TNIK-213ENST00000487846 MTORP42345 2549 aa0.44□□□□□ -2.34
TNIK-213ENST00000487846 SPRR2EP22531 72 aa0.43□□□□□ -2.34
TNIK-213ENST00000487846 GCN1Q92616 2671 aaKnown RBP0.43□□□□□ -2.34
TNIK-213ENST00000487846 PKHD1P08F94 4074 aa0.42□□□□□ -2.34
TNIK-213ENST00000487846 PDZD2O15018 2839 aa0.42□□□□□ -2.34
TNIK-213ENST00000487846 A0A0C4DFX4 3053 aa0.41□□□□□ -2.34
TNIK-213ENST00000487846 FLNAP21333 2647 aaKnown RBP0.41□□□□□ -2.34
TNIK-213ENST00000487846 KMT2DO14686 5537 aa0.41□□□□□ -2.34
TNIK-213ENST00000487846 DNAH9Q9NYC9 4486 aa0.41□□□□□ -2.34
TNIK-213ENST00000487846 DMXL1Q9Y485 3027 aa0.4□□□□□ -2.34
TNIK-213ENST00000487846 CUBNO60494 3623 aa0.4□□□□□ -2.35
TNIK-213ENST00000487846 ANK3Q12955 4377 aaKnown RBP0.4□□□□□ -2.35
TNIK-213ENST00000487846 ZZEF1O43149 2961 aa0.39□□□□□ -2.35
TNIK-213ENST00000487846 LRP2P98164 4655 aa0.38□□□□□ -2.35
TNIK-213ENST00000487846 ANKRD11Q6UB99 2663 aaPredicted RBP0.37□□□□□ -2.35
TNIK-213ENST00000487846 SETD2Q9BYW2 2564 aaPredicted RBP0.37□□□□□ -2.35
TNIK-213ENST00000487846 DNAH3Q8TD57 4116 aa0.37□□□□□ -2.35
TNIK-213ENST00000487846 TACC2O95359 2948 aa0.36□□□□□ -2.35
TNIK-213ENST00000487846 FLGP20930 4061 aaPredicted RBP0.35□□□□□ -2.35
TNIK-213ENST00000487846 PKHD1L1Q86WI1 4243 aa0.35□□□□□ -2.35
TNIK-213ENST00000487846 SPRR2FQ96RM1 72 aa0.34□□□□□ -2.36
TNIK-213ENST00000487846 UTP20O75691 2785 aaKnown RBP0.34□□□□□ -2.36
TNIK-213ENST00000487846 SPART-AS1P0CW21 52 aa0.33□□□□□ -2.36
TNIK-213ENST00000487846 TENM2Q9NT68 2774 aa0.33□□□□□ -2.36
TNIK-213ENST00000487846 ANKHD1Q8IWZ3 2542 aaKnown RBP0.31□□□□□ -2.36
TNIK-213ENST00000487846 ACACAQ13085 2346 aa0.31□□□□□ -2.36
TNIK-213ENST00000487846 RPL39P62891 51 aaKnown RBP0.31□□□□□ -2.36
TNIK-213ENST00000487846 FAT3Q8TDW7 4589 aa0.31□□□□□ -2.36
TNIK-213ENST00000487846 DNAH2Q9P225 4427 aa0.3□□□□□ -2.36
TNIK-213ENST00000487846 DNAH11Q96DT5 4516 aa0.3□□□□□ -2.36
TNIK-213ENST00000487846 KRTAP8-1Q8IUC2 63 aa0.3□□□□□ -2.36
TNIK-213ENST00000487846 APOBP04114 4563 aaKnown RBP0.3□□□□□ -2.36
TNIK-213ENST00000487846 DSTQ03001 7570 aaKnown RBP0.29□□□□□ -2.36
TNIK-213ENST00000487846 SPG11Q96JI7 2443 aa0.29□□□□□ -2.36
TNIK-213ENST00000487846 SVEP1Q4LDE5 3571 aa0.29□□□□□ -2.36
TNIK-213ENST00000487846 MROH2BQ7Z745 1585 aa0.28□□□□□ -2.36
TNIK-213ENST00000487846 SPRR2GQ9BYE4 73 aa0.28□□□□□ -2.36
TNIK-213ENST00000487846 ZANQ9Y493 2812 aa0.28□□□□□ -2.36
TNIK-213ENST00000487846 LRRK2Q5S007 2527 aa0.27□□□□□ -2.37
TNIK-213ENST00000487846 EPG5Q9HCE0 2579 aa0.27□□□□□ -2.37
TNIK-213ENST00000487846 DUOX1Q9NRD9 1551 aa0.26□□□□□ -2.37
TNIK-213ENST00000487846 FASNP49327 2511 aaKnown RBP0.25□□□□□ -2.37
TNIK-213ENST00000487846 RANBP2P49792 3224 aaKnown RBP0.25□□□□□ -2.37
TNIK-213ENST00000487846 HTTP42858 3142 aa0.23□□□□□ -2.37
TNIK-213ENST00000487846 RIF1Q5UIP0 2472 aaKnown RBP0.23□□□□□ -2.37
TNIK-213ENST00000487846 NBEAQ8NFP9 2946 aa0.23□□□□□ -2.37
TNIK-213ENST00000487846 TOMM7Q9P0U1 55 aa0.23□□□□□ -2.37
TNIK-213ENST00000487846 TGP01266 2768 aa0.23□□□□□ -2.37
TNIK-213ENST00000487846 MAP1AP78559 2803 aaPredicted RBP0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms