RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 TRAV7A0A075B6U4 112 aa8.43□□□□□ -1.06
FGFR1-222ENST00000487647 KRTAP29-1A8MX34 341 aaPredicted RBP8.42□□□□□ -1.06
FGFR1-222ENST00000487647 KIAA1109Q2LD37 5005 aa8.42□□□□□ -1.06
FGFR1-222ENST00000487647 CASC2Q6XLA1 102 aa8.41□□□□□ -1.06
FGFR1-222ENST00000487647 IGHV6-1A0A0B4J1U7 121 aa8.4□□□□□ -1.07
FGFR1-222ENST00000487647 MMP24-AS1A0A0U1RRL7 71 aa8.4□□□□□ -1.07
FGFR1-222ENST00000487647 WFDC13Q8IUB5 93 aa8.4□□□□□ -1.07
FGFR1-222ENST00000487647 C8orf17Q9NRJ1 99 aa8.4□□□□□ -1.07
FGFR1-222ENST00000487647 KRTAP10-8P60410 259 aa8.39□□□□□ -1.07
FGFR1-222ENST00000487647 OCR1Q9BZK8 76 aa8.39□□□□□ -1.07
FGFR1-222ENST00000487647 hDV103S1A0JD37 113 aa8.38□□□□□ -1.07
FGFR1-222ENST00000487647 C8orf87E5RJ46 101 aa8.38□□□□□ -1.07
FGFR1-222ENST00000487647 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
FGFR1-222ENST00000487647 TMEM258P61165 79 aa8.36□□□□□ -1.07
FGFR1-222ENST00000487647 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
FGFR1-222ENST00000487647 TMEM254Q8TBM7 123 aa8.34□□□□□ -1.07
FGFR1-222ENST00000487647 LINC00313P59037 77 aa8.31□□□□□ -1.08
FGFR1-222ENST00000487647 MRPL34Q9BQ48 92 aaKnown RBP8.31□□□□□ -1.08
FGFR1-222ENST00000487647 TP53AIP1Q9HCN2 124 aa8.3□□□□□ -1.08
FGFR1-222ENST00000487647 C5orf47Q569G3 176 aa8.29□□□□□ -1.08
FGFR1-222ENST00000487647 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
FGFR1-222ENST00000487647 OXTP01178 125 aa8.29□□□□□ -1.08
FGFR1-222ENST00000487647 TNXBP22105 4242 aa8.26□□□□□ -1.09
FGFR1-222ENST00000487647 LRP1Q07954 4544 aaKnown RBP8.25□□□□□ -1.09
FGFR1-222ENST00000487647 FAT3Q8TDW7 4589 aa8.25□□□□□ -1.09
FGFR1-222ENST00000487647 KLKP1Q107X0 134 aa8.25□□□□□ -1.09
FGFR1-222ENST00000487647 C20orf197Q8N268 126 aa8.25□□□□□ -1.09
FGFR1-222ENST00000487647 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
FGFR1-222ENST00000487647 MT1HL1P0DM35 61 aa8.22□□□□□ -1.09
FGFR1-222ENST00000487647 MP68P56378 58 aa8.22□□□□□ -1.09
FGFR1-222ENST00000487647 BIRC6Q9NR09 4857 aa8.22□□□□□ -1.09
FGFR1-222ENST00000487647 FLG2Q5D862 2391 aaPredicted RBP8.22□□□□□ -1.09
FGFR1-222ENST00000487647 NDUFS5O43920 106 aa8.21□□□□□ -1.09
FGFR1-222ENST00000487647 Q8N9P0 234 aaPredicted RBP8.21□□□□□ -1.09
FGFR1-222ENST00000487647 H3BPC8 53 aa8.21□□□□□ -1.1
FGFR1-222ENST00000487647 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
FGFR1-222ENST00000487647 KRTAP16-1A8MUX0 517 aa8.2□□□□□ -1.1
FGFR1-222ENST00000487647 FP248Q71RG6 208 aaPredicted RBP8.2□□□□□ -1.1
FGFR1-222ENST00000487647 NDUFC1O43677 76 aa8.19□□□□□ -1.1
FGFR1-222ENST00000487647 TRAV22A0A0B4J277 110 aa8.18□□□□□ -1.1
FGFR1-222ENST00000487647 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
FGFR1-222ENST00000487647 H0Y9P7 68 aa8.16□□□□□ -1.1
FGFR1-222ENST00000487647 RETNLBQ9BQ08 111 aa8.16□□□□□ -1.1
FGFR1-222ENST00000487647 SNURFQ9Y675 71 aa8.16□□□□□ -1.1
FGFR1-222ENST00000487647 FAM236DA0A1B0GTK5 79 aa8.14□□□□□ -1.11
FGFR1-222ENST00000487647 FAM236CP0DP71 79 aa8.14□□□□□ -1.11
FGFR1-222ENST00000487647 MYCBP2O75592 4640 aa8.14□□□□□ -1.11
FGFR1-222ENST00000487647 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
FGFR1-222ENST00000487647 DMBT1Q9UGM3 2413 aaPredicted RBP8.14□□□□□ -1.11
FGFR1-222ENST00000487647 HERC2O95714 4834 aa8.12□□□□□ -1.11
FGFR1-222ENST00000487647 H7BZZ5 65 aa8.11□□□□□ -1.11
FGFR1-222ENST00000487647 LINC00208Q96KT6 92 aa8.11□□□□□ -1.11
FGFR1-222ENST00000487647 SERP1Q9Y6X1 66 aa8.11□□□□□ -1.11
FGFR1-222ENST00000487647 ATP5EP56381 51 aaPredicted RBP8.1□□□□□ -1.11
FGFR1-222ENST00000487647 C1orf64Q8NEQ6 169 aa8.1□□□□□ -1.11
FGFR1-222ENST00000487647 IGLV7-46A0A075B6I9 117 aa8.07□□□□□ -1.12
FGFR1-222ENST00000487647 KRTAP13-3Q3SY46 172 aa8.07□□□□□ -1.12
FGFR1-222ENST00000487647 C20orf166-AS1Q96NR2 134 aa8.07□□□□□ -1.12
FGFR1-222ENST00000487647 C9orf92A6NGG3 77 aa8.07□□□□□ -1.12
FGFR1-222ENST00000487647 Q5W150 140 aa8.07□□□□□ -1.12
FGFR1-222ENST00000487647 LOC101927531A0A1B0GV80 90 aa8.06□□□□□ -1.12
FGFR1-222ENST00000487647 A8MUU9 505 aa8.06□□□□□ -1.12
FGFR1-222ENST00000487647 ABCA13Q86UQ4 5058 aa8.02□□□□□ -1.13
FGFR1-222ENST00000487647 J3QL48 77 aa8.01□□□□□ -1.13
FGFR1-222ENST00000487647 Q75L30 129 aa8.01□□□□□ -1.13
FGFR1-222ENST00000487647 SMIM26A0A096LP01 95 aa7.98□□□□□ -1.13
FGFR1-222ENST00000487647 PRR4Q16378 134 aa7.98□□□□□ -1.13
FGFR1-222ENST00000487647 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
FGFR1-222ENST00000487647 C4orf26Q17RF5 130 aa7.96□□□□□ -1.13
FGFR1-222ENST00000487647 SPANXA2-OT1Q8N9U9 137 aa7.96□□□□□ -1.13
FGFR1-222ENST00000487647 IGKV2-30P06310 120 aa7.96□□□□□ -1.14
FGFR1-222ENST00000487647 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
FGFR1-222ENST00000487647 XP32Q5T750 250 aa7.92□□□□□ -1.14
FGFR1-222ENST00000487647 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.14
FGFR1-222ENST00000487647 PCOTHQ58A44 107 aa7.9□□□□□ -1.14
FGFR1-222ENST00000487647 ATP11AUNQ6ZP68 121 aa7.9□□□□□ -1.14
FGFR1-222ENST00000487647 C7orf65Q6ZTY9 151 aa7.89□□□□□ -1.15
FGFR1-222ENST00000487647 IGKV2D-30A0A075B6S6 120 aa7.88□□□□□ -1.15
FGFR1-222ENST00000487647 HRES1P13985 223 aa7.82□□□□□ -1.16
FGFR1-222ENST00000487647 PRO0628Q9UI54 55 aa7.81□□□□□ -1.16
FGFR1-222ENST00000487647 SPINK7P58062 85 aa7.79□□□□□ -1.16
FGFR1-222ENST00000487647 DMAC1Q96GE9 116 aa7.74□□□□□ -1.17
FGFR1-222ENST00000487647 PCLOQ9Y6V0 5065 aa7.73□□□□□ -1.17
FGFR1-222ENST00000487647 ACYP2P14621 99 aa7.72□□□□□ -1.17
FGFR1-222ENST00000487647 A8MUN3 132 aa7.7□□□□□ -1.18
FGFR1-222ENST00000487647 SEC61BP60468 96 aaKnown RBP7.69□□□□□ -1.18
FGFR1-222ENST00000487647 Q1T7F1 81 aa7.68□□□□□ -1.18
FGFR1-222ENST00000487647 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
FGFR1-222ENST00000487647 COA5Q86WW8 74 aa7.67□□□□□ -1.18
FGFR1-222ENST00000487647 LRP2P98164 4655 aa7.65□□□□□ -1.19
FGFR1-222ENST00000487647 V9GYY9 64 aa7.63□□□□□ -1.19
FGFR1-222ENST00000487647 LPAP08519 4548 aa7.63□□□□□ -1.19
FGFR1-222ENST00000487647 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
FGFR1-222ENST00000487647 BRK1Q8WUW1 75 aa7.63□□□□□ -1.19
FGFR1-222ENST00000487647 COX6B2Q6YFQ2 88 aa7.62□□□□□ -1.19
FGFR1-222ENST00000487647 CHKB-CPT1BH3BT56 60 aa7.57□□□□□ -1.2
FGFR1-222ENST00000487647 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
FGFR1-222ENST00000487647 HERC1Q15751 4861 aa7.55□□□□□ -1.2
FGFR1-222ENST00000487647 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.2
FGFR1-222ENST00000487647 RBM12B-AS1Q9P1G2 102 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms