RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 DEFB123Q8N688 67 aa1.02□□□□□ -2.25
SNRNP27-204ENST00000487029 S4R3F8 94 aa1.02□□□□□ -2.25
SNRNP27-204ENST00000487029 SZT2Q5T011 3432 aa1.02□□□□□ -2.25
SNRNP27-204ENST00000487029 ASH1LQ9NR48 2969 aaKnown RBP1.02□□□□□ -2.25
SNRNP27-204ENST00000487029 DSPP15924 2871 aaKnown RBP1.02□□□□□ -2.25
SNRNP27-204ENST00000487029 IGF2RP11717 2491 aa1.01□□□□□ -2.25
SNRNP27-204ENST00000487029 PCNX1Q96RV3 2341 aa1.01□□□□□ -2.25
SNRNP27-204ENST00000487029 AKAP9Q99996 3911 aa1.01□□□□□ -2.25
SNRNP27-204ENST00000487029 A0A0D9SG42 100 aa1.01□□□□□ -2.25
SNRNP27-204ENST00000487029 M0QZ58 72 aa1.01□□□□□ -2.25
SNRNP27-204ENST00000487029 C10orf95Q9H7T3 257 aa1.01□□□□□ -2.25
SNRNP27-204ENST00000487029 LRBAP50851 2863 aa1.01□□□□□ -2.25
SNRNP27-204ENST00000487029 USP34Q70CQ2 3546 aa1.01□□□□□ -2.25
SNRNP27-204ENST00000487029 HELZ2Q9BYK8 2649 aaKnown RBP1.01□□□□□ -2.25
SNRNP27-204ENST00000487029 NCOR1O75376 2440 aa1□□□□□ -2.25
SNRNP27-204ENST00000487029 WDFY4Q6ZS81 3184 aa1□□□□□ -2.25
SNRNP27-204ENST00000487029 EP400Q96L91 3159 aa1□□□□□ -2.25
SNRNP27-204ENST00000487029 LAMA2P24043 3122 aaKnown RBP1□□□□□ -2.25
SNRNP27-204ENST00000487029 SPG11Q96JI7 2443 aa1□□□□□ -2.25
SNRNP27-204ENST00000487029 DNAH14Q0VDD8 3507 aa1□□□□□ -2.25
SNRNP27-204ENST00000487029 UBR5O95071 2799 aaPredicted RBP1□□□□□ -2.25
SNRNP27-204ENST00000487029 ITPR1Q14643 2758 aa1□□□□□ -2.25
SNRNP27-204ENST00000487029 MKI67P46013 3256 aaKnown RBP1□□□□□ -2.25
SNRNP27-204ENST00000487029 CFAP47Q6ZTR5 3102 aa1□□□□□ -2.25
SNRNP27-204ENST00000487029 OTOGQ6ZRI0 2925 aa0.99□□□□□ -2.25
SNRNP27-204ENST00000487029 C5orf42Q9H799 3197 aa0.99□□□□□ -2.25
SNRNP27-204ENST00000487029 LAMA1P25391 3075 aa0.99□□□□□ -2.25
SNRNP27-204ENST00000487029 DMXL2Q8TDJ6 3036 aa0.99□□□□□ -2.25
SNRNP27-204ENST00000487029 RPS29P62273 56 aaKnown RBP0.99□□□□□ -2.25
SNRNP27-204ENST00000487029 XIRP2A4UGR9 3374 aa0.99□□□□□ -2.25
SNRNP27-204ENST00000487029 SPENQ96T58 3664 aaKnown RBP0.99□□□□□ -2.25
SNRNP27-204ENST00000487029 CREBBPQ92793 2442 aa0.99□□□□□ -2.25
SNRNP27-204ENST00000487029 C2CD3Q4AC94 2353 aa0.99□□□□□ -2.25
SNRNP27-204ENST00000487029 CHD9Q3L8U1 2897 aa0.98□□□□□ -2.25
SNRNP27-204ENST00000487029 SPTAN1Q13813 2472 aaKnown RBP0.98□□□□□ -2.25
SNRNP27-204ENST00000487029 CSPG4Q6UVK1 2322 aa0.98□□□□□ -2.25
SNRNP27-204ENST00000487029 BOD1L1Q8NFC6 3051 aa0.98□□□□□ -2.25
SNRNP27-204ENST00000487029 ZFHX4Q86UP3 3567 aa0.98□□□□□ -2.25
SNRNP27-204ENST00000487029 FLG2Q5D862 2391 aaPredicted RBP0.98□□□□□ -2.25
SNRNP27-204ENST00000487029 NBASA2RRP1 2371 aa0.97□□□□□ -2.25
SNRNP27-204ENST00000487029 NBPF19A0A087WUL8 3843 aa0.97□□□□□ -2.25
SNRNP27-204ENST00000487029 UTP20O75691 2785 aaKnown RBP0.97□□□□□ -2.25
SNRNP27-204ENST00000487029 WDFY3Q8IZQ1 3526 aa0.97□□□□□ -2.25
SNRNP27-204ENST00000487029 REV3LO60673 3130 aa0.97□□□□□ -2.25
SNRNP27-204ENST00000487029 TEX15Q9BXT5 2789 aa0.96□□□□□ -2.25
SNRNP27-204ENST00000487029 ABCA2Q9BZC7 2435 aa0.96□□□□□ -2.26
SNRNP27-204ENST00000487029 DCHS1Q96JQ0 3298 aa0.96□□□□□ -2.26
SNRNP27-204ENST00000487029 SRRM2Q9UQ35 2752 aaKnown RBP0.96□□□□□ -2.26
SNRNP27-204ENST00000487029 Q5VSD8 79 aa0.96□□□□□ -2.26
SNRNP27-204ENST00000487029 TLN1Q9Y490 2541 aaKnown RBP0.96□□□□□ -2.26
SNRNP27-204ENST00000487029 HTTP42858 3142 aa0.96□□□□□ -2.26
SNRNP27-204ENST00000487029 GVINP1Q7Z2Y8 2422 aa0.96□□□□□ -2.26
SNRNP27-204ENST00000487029 VWFP04275 2813 aa0.96□□□□□ -2.26
SNRNP27-204ENST00000487029 APCP25054 2843 aa0.96□□□□□ -2.26
SNRNP27-204ENST00000487029 DMXL1Q9Y485 3027 aa0.95□□□□□ -2.26
SNRNP27-204ENST00000487029 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
SNRNP27-204ENST00000487029 CENPEQ02224 2701 aa0.95□□□□□ -2.26
SNRNP27-204ENST00000487029 COL12A1Q99715 3063 aa0.95□□□□□ -2.26
SNRNP27-204ENST00000487029 CRYBG3Q68DQ2 2970 aa0.95□□□□□ -2.26
SNRNP27-204ENST00000487029 ATMQ13315 3056 aa0.95□□□□□ -2.26
SNRNP27-204ENST00000487029 ZNF462Q96JM2 2506 aa0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 TLN2Q9Y4G6 2542 aa0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 CEP290O15078 2479 aa0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 CCDC168Q8NDH2 2452 aa0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 CELSR1Q9NYQ6 3014 aa0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 FREM2Q5SZK8 3169 aa0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 SETXQ7Z333 2677 aaKnown RBP0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 NAV2Q8IVL1 2488 aa0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 COL6A5A8TX70 2615 aa0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 SMG1Q96Q15 3661 aaKnown RBP0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 FAM208BQ5VWN6 2430 aa0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 USP9XQ93008 2570 aaPredicted RBP0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 HRNRQ86YZ3 2850 aaPredicted RBP0.94□□□□□ -2.26
SNRNP27-204ENST00000487029 NF1P21359 2839 aa0.93□□□□□ -2.26
SNRNP27-204ENST00000487029 GCN1Q92616 2671 aaKnown RBP0.93□□□□□ -2.26
SNRNP27-204ENST00000487029 F8P00451 2351 aa0.93□□□□□ -2.26
SNRNP27-204ENST00000487029 LAMA3Q16787 3333 aa0.93□□□□□ -2.26
SNRNP27-204ENST00000487029 BRCA2P51587 3418 aa0.93□□□□□ -2.26
SNRNP27-204ENST00000487029 LYSTQ99698 3801 aa0.93□□□□□ -2.26
SNRNP27-204ENST00000487029 DCHS2Q6V1P9 2916 aa0.93□□□□□ -2.26
SNRNP27-204ENST00000487029 CSMD1Q96PZ7 3565 aa0.93□□□□□ -2.26
SNRNP27-204ENST00000487029 SPEGQ15772 3267 aa0.93□□□□□ -2.26
SNRNP27-204ENST00000487029 MEGF8Q7Z7M0 2845 aa0.93□□□□□ -2.26
SNRNP27-204ENST00000487029 LOC400499M0QZD8 3231 aa0.92□□□□□ -2.26
SNRNP27-204ENST00000487029 NIPBLQ6KC79 2804 aaeCLIP0.92□□□□□ -2.26
SNRNP27-204ENST00000487029 TNP1P09430 55 aa0.92□□□□□ -2.26
SNRNP27-204ENST00000487029 VCANP13611 3396 aa0.92□□□□□ -2.26
SNRNP27-204ENST00000487029 VPS13DQ5THJ4 4388 aa0.92□□□□□ -2.26
SNRNP27-204ENST00000487029 SONP18583 2426 aaKnown RBP0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 BSNQ9UPA5 3926 aa0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 LAMA5O15230 3695 aa0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 CELSR3Q9NYQ7 3312 aa0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 CEP295Q9C0D2 2601 aa0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 HECTD1Q9ULT8 2610 aa0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 ADGRG4Q8IZF6 3080 aa0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 CFAP46Q8IYW2 2715 aa0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 PTPN13Q12923 2485 aa0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 DOPEY1Q5JWR5 2465 aa0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 RIF1Q5UIP0 2472 aaKnown RBP0.91□□□□□ -2.26
SNRNP27-204ENST00000487029 FRAS1Q86XX4 4008 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms