RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 LINC00308Q8TCZ7 52 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 SPANXDQ9BXN6 97 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 HSPB8Q9UJY1 196 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 IGLV5-48A0A075B6I7 105 aa2.04□□□□□ -2.08
SNRNP40-205ENST00000486941 TRBV7-6A0A0J9YX20 115 aa2.04□□□□□ -2.08
SNRNP40-205ENST00000486941 TCL1BO95988 128 aa2.04□□□□□ -2.08
SNRNP40-205ENST00000486941 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
SNRNP40-205ENST00000486941 C6orf99Q4VX62 202 aa2.04□□□□□ -2.08
SNRNP40-205ENST00000486941 CEND1Q8N111 149 aa2.04□□□□□ -2.08
SNRNP40-205ENST00000486941 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
SNRNP40-205ENST00000486941 PMCHL2Q9BQD1 86 aa2.04□□□□□ -2.08
SNRNP40-205ENST00000486941 A0A0G2JQZ4 141 aa2.03□□□□□ -2.08
SNRNP40-205ENST00000486941 A0A1B0GWB2 263 aa2.03□□□□□ -2.08
SNRNP40-205ENST00000486941 CXCL6P80162 114 aa2.03□□□□□ -2.08
SNRNP40-205ENST00000486941 VAMP3Q15836 100 aa2.03□□□□□ -2.08
SNRNP40-205ENST00000486941 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
SNRNP40-205ENST00000486941 BATFQ16520 125 aa2.02□□□□□ -2.09
SNRNP40-205ENST00000486941 Q6Q795 121 aa2.02□□□□□ -2.09
SNRNP40-205ENST00000486941 ATP11AUNQ6ZP68 121 aa2.02□□□□□ -2.09
SNRNP40-205ENST00000486941 A0A1W2PPM0 123 aa2.01□□□□□ -2.09
SNRNP40-205ENST00000486941 ZNF815PA8K554 130 aa2.01□□□□□ -2.09
SNRNP40-205ENST00000486941 SYS1-DBNDD2H3BUS1 97 aa2.01□□□□□ -2.09
SNRNP40-205ENST00000486941 COX8AP10176 69 aa2.01□□□□□ -2.09
SNRNP40-205ENST00000486941 IFITM1P13164 125 aa2.01□□□□□ -2.09
SNRNP40-205ENST00000486941 C5orf47Q569G3 176 aa2.01□□□□□ -2.09
SNRNP40-205ENST00000486941 COPS9Q8WXC6 57 aa2.01□□□□□ -2.09
SNRNP40-205ENST00000486941 NHP2Q9NX24 153 aaKnown RBP2.01□□□□□ -2.09
SNRNP40-205ENST00000486941 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
SNRNP40-205ENST00000486941 A6NDN8 102 aa2□□□□□ -2.09
SNRNP40-205ENST00000486941 F8W1H4 67 aa2□□□□□ -2.09
SNRNP40-205ENST00000486941 F8WEM9 126 aa2□□□□□ -2.09
SNRNP40-205ENST00000486941 RPS28P62857 69 aaKnown RBP2□□□□□ -2.09
SNRNP40-205ENST00000486941 LINC01545Q5VT33 79 aa2□□□□□ -2.09
SNRNP40-205ENST00000486941 Q6JHZ5 121 aa2□□□□□ -2.09
SNRNP40-205ENST00000486941 GTF2H5Q6ZYL4 71 aa2□□□□□ -2.09
SNRNP40-205ENST00000486941 PCP2Q8IVA1 136 aa2□□□□□ -2.09
SNRNP40-205ENST00000486941 TTTY13Q9BZ97 58 aa2□□□□□ -2.09
SNRNP40-205ENST00000486941 SS18L2Q9UHA2 77 aa2□□□□□ -2.09
SNRNP40-205ENST00000486941 USH2AO75445 5202 aa2□□□□□ -2.09
SNRNP40-205ENST00000486941 TRBV7-7A0A0K0K1E9 115 aa1.99□□□□□ -2.09
SNRNP40-205ENST00000486941 MT-ATP8P03928 68 aa1.99□□□□□ -2.09
SNRNP40-205ENST00000486941 KRTDAPP60985 99 aa1.99□□□□□ -2.09
SNRNP40-205ENST00000486941 SCGB1D4Q6XE38 83 aa1.99□□□□□ -2.09
SNRNP40-205ENST00000486941 CLEC2BQ92478 149 aa1.99□□□□□ -2.09
SNRNP40-205ENST00000486941 OBSCN-AS1Q96MR7 158 aa1.99□□□□□ -2.09
SNRNP40-205ENST00000486941 HIGD1BQ9P298 99 aa1.99□□□□□ -2.09
SNRNP40-205ENST00000486941 TRBV20-1A0A075B6N2 111 aa1.98□□□□□ -2.09
SNRNP40-205ENST00000486941 TRAV13-2A0A0B4J235 113 aa1.98□□□□□ -2.09
SNRNP40-205ENST00000486941 A0A1B0GX51 115 aa1.98□□□□□ -2.09
SNRNP40-205ENST00000486941 IGFL1Q6UW32 110 aa1.98□□□□□ -2.09
SNRNP40-205ENST00000486941 LINC00575Q6W349 94 aa1.98□□□□□ -2.09
SNRNP40-205ENST00000486941 MUSTN1Q8IVN3 82 aa1.98□□□□□ -2.09
SNRNP40-205ENST00000486941 SMIM20Q8N5G0 67 aa1.98□□□□□ -2.09
SNRNP40-205ENST00000486941 SMIM11BQ8TCY0 68 aa1.98□□□□□ -2.09
SNRNP40-205ENST00000486941 Q96NJ1 140 aa1.98□□□□□ -2.09
SNRNP40-205ENST00000486941 C20orf166-AS1Q96NR2 134 aa1.98□□□□□ -2.09
SNRNP40-205ENST00000486941 hADV29S1A0JD25 119 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 A8MUU9 505 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 H3BMG7 143 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 CCDC179H3BU77 68 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 H3BUT2 72 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 LST1O00453 97 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 MT2AP02795 61 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 Q6ZQY7 126 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 ATOH7Q8N100 152 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 Q8N9L7 120 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 PPDPFLQ8WWR9 84 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 SPCS1Q9Y6A9 102 aa1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 FCGBPQ9Y6R7 5405 aaPredicted RBP1.97□□□□□ -2.09
SNRNP40-205ENST00000486941 J3QR89 54 aa1.96□□□□□ -2.1
SNRNP40-205ENST00000486941 FABP2P12104 132 aa1.96□□□□□ -2.1
SNRNP40-205ENST00000486941 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.96□□□□□ -2.1
SNRNP40-205ENST00000486941 SYNE2Q8WXH0 6885 aaKnown RBP1.95□□□□□ -2.1
SNRNP40-205ENST00000486941 MT1FP04733 61 aa1.95□□□□□ -2.1
SNRNP40-205ENST00000486941 FXYD2P54710 66 aa1.95□□□□□ -2.1
SNRNP40-205ENST00000486941 ETDBQ3ZM63 59 aa1.95□□□□□ -2.1
SNRNP40-205ENST00000486941 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
SNRNP40-205ENST00000486941 TEN1Q86WV5 123 aa1.94□□□□□ -2.1
SNRNP40-205ENST00000486941 LINC00846Q9NV44 126 aa1.94□□□□□ -2.1
SNRNP40-205ENST00000486941 V9GYY9 64 aa1.94□□□□□ -2.1
SNRNP40-205ENST00000486941 FAM236DA0A1B0GTK5 79 aa1.93□□□□□ -2.1
SNRNP40-205ENST00000486941 FAM236CP0DP71 79 aa1.93□□□□□ -2.1
SNRNP40-205ENST00000486941 HIST1H4AP62805 103 aaKnown RBP1.93□□□□□ -2.1
SNRNP40-205ENST00000486941 NAA38Q9BRA0 125 aaKnown RBP1.93□□□□□ -2.1
SNRNP40-205ENST00000486941 ANAPC13Q9BS18 74 aa1.93□□□□□ -2.1
SNRNP40-205ENST00000486941 RBM12B-AS1Q9P1G2 102 aa1.93□□□□□ -2.1
SNRNP40-205ENST00000486941 A0A087WSZ3 146 aa1.92□□□□□ -2.1
SNRNP40-205ENST00000486941 SNCGO76070 127 aa1.92□□□□□ -2.1
SNRNP40-205ENST00000486941 HRES1P13985 223 aa1.92□□□□□ -2.1
SNRNP40-205ENST00000486941 LINC00313P59037 77 aa1.92□□□□□ -2.1
SNRNP40-205ENST00000486941 KRTAP19-6Q3LI70 58 aa1.92□□□□□ -2.1
SNRNP40-205ENST00000486941 IMUPQ9GZP8 106 aa1.92□□□□□ -2.1
SNRNP40-205ENST00000486941 FAM240AA0A1B0GVK7 77 aa1.91□□□□□ -2.1
SNRNP40-205ENST00000486941 C9JAW5 83 aa1.91□□□□□ -2.1
SNRNP40-205ENST00000486941 H0YGX0 51 aa1.91□□□□□ -2.1
SNRNP40-205ENST00000486941 K7ERJ3 54 aa1.91□□□□□ -2.1
SNRNP40-205ENST00000486941 A0A1W2PNM2 257 aa1.9□□□□□ -2.11
SNRNP40-205ENST00000486941 J3KT08 172 aa1.9□□□□□ -2.11
SNRNP40-205ENST00000486941 UQCRQO14949 82 aa1.89□□□□□ -2.11
SNRNP40-205ENST00000486941 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms