RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 FAM236AA0A1B0GUQ0 79 aa3.53□□□□□ -1.84
XRN1-212ENST00000486211 FAM236BA0A1B0GV22 79 aa3.53□□□□□ -1.84
XRN1-212ENST00000486211 A6NDN8 102 aa3.53□□□□□ -1.84
XRN1-212ENST00000486211 TRAPPC1Q9Y5R8 145 aa3.53□□□□□ -1.84
XRN1-212ENST00000486211 PCP4L1A6NKN8 68 aa3.52□□□□□ -1.85
XRN1-212ENST00000486211 IGKCP01834 107 aa3.52□□□□□ -1.85
XRN1-212ENST00000486211 IGKV4-1P06312 121 aa3.52□□□□□ -1.85
XRN1-212ENST00000486211 hADV29S1A0JD25 119 aa3.51□□□□□ -1.85
XRN1-212ENST00000486211 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
XRN1-212ENST00000486211 PPDPFLQ8WWR9 84 aa3.5□□□□□ -1.85
XRN1-212ENST00000486211 IGHV6-1A0A0B4J1U7 121 aa3.49□□□□□ -1.85
XRN1-212ENST00000486211 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.49□□□□□ -1.85
XRN1-212ENST00000486211 SNHG12Q9BXW3 62 aa3.49□□□□□ -1.85
XRN1-212ENST00000486211 TTTY13Q9BZ97 58 aa3.48□□□□□ -1.85
XRN1-212ENST00000486211 HSBP1O75506 76 aa3.47□□□□□ -1.85
XRN1-212ENST00000486211 LEPROTL1O95214 131 aa3.47□□□□□ -1.85
XRN1-212ENST00000486211 UQCC3Q6UW78 93 aa3.47□□□□□ -1.85
XRN1-212ENST00000486211 C3orf79P0CE67 100 aa3.46□□□□□ -1.86
XRN1-212ENST00000486211 VAMP3Q15836 100 aa3.46□□□□□ -1.86
XRN1-212ENST00000486211 DEFB116Q30KQ4 102 aa3.46□□□□□ -1.86
XRN1-212ENST00000486211 LINC00472Q9H8W2 130 aa3.46□□□□□ -1.86
XRN1-212ENST00000486211 HSPB8Q9UJY1 196 aa3.46□□□□□ -1.86
XRN1-212ENST00000486211 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
XRN1-212ENST00000486211 MT1XP80297 61 aa3.45□□□□□ -1.86
XRN1-212ENST00000486211 C8orf87E5RJ46 101 aa3.44□□□□□ -1.86
XRN1-212ENST00000486211 IFITM1P13164 125 aa3.44□□□□□ -1.86
XRN1-212ENST00000486211 TMEM218A2RU14 115 aa3.43□□□□□ -1.86
XRN1-212ENST00000486211 KLKP1Q107X0 134 aa3.43□□□□□ -1.86
XRN1-212ENST00000486211 C5orf47Q569G3 176 aa3.43□□□□□ -1.86
XRN1-212ENST00000486211 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
XRN1-212ENST00000486211 MUSTN1Q8IVN3 82 aa3.43□□□□□ -1.86
XRN1-212ENST00000486211 RAB37Q96AX2 223 aa3.43□□□□□ -1.86
XRN1-212ENST00000486211 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
XRN1-212ENST00000486211 A0A1B0GVX0 72 aa3.42□□□□□ -1.86
XRN1-212ENST00000486211 NDUFV3P56181 108 aaKnown RBP3.42□□□□□ -1.86
XRN1-212ENST00000486211 COPS9Q8WXC6 57 aa3.42□□□□□ -1.86
XRN1-212ENST00000486211 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
XRN1-212ENST00000486211 FABP4P15090 132 aa3.41□□□□□ -1.86
XRN1-212ENST00000486211 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
XRN1-212ENST00000486211 IGKV3D-7A0A0C4DH55 119 aa3.39□□□□□ -1.87
XRN1-212ENST00000486211 H3BMG7 143 aa3.39□□□□□ -1.87
XRN1-212ENST00000486211 SCGB1D4Q6XE38 83 aa3.38□□□□□ -1.87
XRN1-212ENST00000486211 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
XRN1-212ENST00000486211 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
XRN1-212ENST00000486211 TRBV7-4A0A0J9YYF1 115 aa3.37□□□□□ -1.87
XRN1-212ENST00000486211 DSCR8Q96T75 97 aa3.37□□□□□ -1.87
XRN1-212ENST00000486211 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
XRN1-212ENST00000486211 C12orf57Q99622 126 aa3.36□□□□□ -1.87
XRN1-212ENST00000486211 LYRM7Q5U5X0 104 aa3.35□□□□□ -1.87
XRN1-212ENST00000486211 YPEL4Q96NS1 127 aa3.35□□□□□ -1.87
XRN1-212ENST00000486211 TRGC2P03986 189 aa3.34□□□□□ -1.87
XRN1-212ENST00000486211 BVES-AS1Q5T3Y7 98 aa3.34□□□□□ -1.87
XRN1-212ENST00000486211 SYS1-DBNDD2H3BUS1 97 aa3.33□□□□□ -1.88
XRN1-212ENST00000486211 MT4P47944 62 aa3.33□□□□□ -1.88
XRN1-212ENST00000486211 CLLU1Q5K131 121 aa3.33□□□□□ -1.88
XRN1-212ENST00000486211 LINC01545Q5VT33 79 aa3.33□□□□□ -1.88
XRN1-212ENST00000486211 CSAG1Q6PB30 78 aa3.33□□□□□ -1.88
XRN1-212ENST00000486211 PRR15Q8IV56 129 aa3.33□□□□□ -1.88
XRN1-212ENST00000486211 CRIPTQ9P021 101 aa3.33□□□□□ -1.88
XRN1-212ENST00000486211 LCA10Q71F78 164 aa3.32□□□□□ -1.88
XRN1-212ENST00000486211 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
XRN1-212ENST00000486211 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
XRN1-212ENST00000486211 ANKRD29Q8N6D5 301 aa3.3□□□□□ -1.88
XRN1-212ENST00000486211 C4orf26Q17RF5 130 aa3.29□□□□□ -1.88
XRN1-212ENST00000486211 C8orf17Q9NRJ1 99 aa3.29□□□□□ -1.88
XRN1-212ENST00000486211 S4R3F8 94 aa3.29□□□□□ -1.88
XRN1-212ENST00000486211 TRACP01848 142 aa3.28□□□□□ -1.88
XRN1-212ENST00000486211 FABP2P12104 132 aa3.28□□□□□ -1.88
XRN1-212ENST00000486211 CCKP06307 115 aa3.27□□□□□ -1.89
XRN1-212ENST00000486211 A0A1B0GV72 72 aa3.26□□□□□ -1.89
XRN1-212ENST00000486211 C2orf91Q6ZV80 131 aa3.26□□□□□ -1.89
XRN1-212ENST00000486211 J3KT08 172 aa3.25□□□□□ -1.89
XRN1-212ENST00000486211 RBM3P98179 157 aaKnown RBP3.25□□□□□ -1.89
XRN1-212ENST00000486211 C7orf65Q6ZTY9 151 aa3.25□□□□□ -1.89
XRN1-212ENST00000486211 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
XRN1-212ENST00000486211 NDUFB1O75438 58 aa3.23□□□□□ -1.89
XRN1-212ENST00000486211 SNCGO76070 127 aa3.23□□□□□ -1.89
XRN1-212ENST00000486211 H0YGX0 51 aa3.22□□□□□ -1.89
XRN1-212ENST00000486211 Q5W150 140 aa3.22□□□□□ -1.89
XRN1-212ENST00000486211 A0A1B0GX51 115 aa3.2□□□□□ -1.9
XRN1-212ENST00000486211 APOC3P02656 99 aa3.2□□□□□ -1.9
XRN1-212ENST00000486211 CXCL6P80162 114 aa3.2□□□□□ -1.9
XRN1-212ENST00000486211 PLAC4Q8WY50 150 aa3.2□□□□□ -1.9
XRN1-212ENST00000486211 SNAPINO95295 136 aa3.19□□□□□ -1.9
XRN1-212ENST00000486211 TMEM254Q8TBM7 123 aa3.19□□□□□ -1.9
XRN1-212ENST00000486211 MRPL34Q9BQ48 92 aaKnown RBP3.19□□□□□ -1.9
XRN1-212ENST00000486211 MMP24-AS1A0A0U1RRL7 71 aa3.18□□□□□ -1.9
XRN1-212ENST00000486211 HSBP1L1C9JCN9 74 aa3.18□□□□□ -1.9
XRN1-212ENST00000486211 ATOH7Q8N100 152 aa3.18□□□□□ -1.9
XRN1-212ENST00000486211 VPS25Q9BRG1 176 aa3.18□□□□□ -1.9
XRN1-212ENST00000486211 A8MUN3 132 aa3.17□□□□□ -1.9
XRN1-212ENST00000486211 SVBPQ8N300 66 aa3.17□□□□□ -1.9
XRN1-212ENST00000486211 HIST1H4GQ99525 98 aa3.17□□□□□ -1.9
XRN1-212ENST00000486211 K7EQZ3 153 aa3.16□□□□□ -1.9
XRN1-212ENST00000486211 Q6ZQT0 140 aa3.16□□□□□ -1.9
XRN1-212ENST00000486211 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
XRN1-212ENST00000486211 NDUFS5O43920 106 aa3.14□□□□□ -1.91
XRN1-212ENST00000486211 KRTDAPP60985 99 aa3.14□□□□□ -1.91
XRN1-212ENST00000486211 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
XRN1-212ENST00000486211 C1orf64Q8NEQ6 169 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms