RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 A0A087WSZ3 146 aa2.91□□□□□ -1.94
SMC4-217ENST00000485867 A6NDN8 102 aa2.91□□□□□ -1.94
SMC4-217ENST00000485867 E9PLD3 99 aa2.91□□□□□ -1.94
SMC4-217ENST00000485867 IGKCP01834 107 aa2.9□□□□□ -1.95
SMC4-217ENST00000485867 LINC00575Q6W349 94 aa2.9□□□□□ -1.95
SMC4-217ENST00000485867 SMIM11BQ8TCY0 68 aa2.9□□□□□ -1.95
SMC4-217ENST00000485867 HSBP1O75506 76 aa2.89□□□□□ -1.95
SMC4-217ENST00000485867 TEN1Q86WV5 123 aa2.89□□□□□ -1.95
SMC4-217ENST00000485867 ZCCHC13Q8WW36 166 aaKnown RBP2.89□□□□□ -1.95
SMC4-217ENST00000485867 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
SMC4-217ENST00000485867 LEPROTL1O95214 131 aa2.88□□□□□ -1.95
SMC4-217ENST00000485867 hADV29S1A0JD25 119 aa2.87□□□□□ -1.95
SMC4-217ENST00000485867 IGKV4-1P06312 121 aa2.87□□□□□ -1.95
SMC4-217ENST00000485867 H1FX-AS1Q4G0G2 97 aa2.87□□□□□ -1.95
SMC4-217ENST00000485867 PPDPFLQ8WWR9 84 aa2.87□□□□□ -1.95
SMC4-217ENST00000485867 SNHG12Q9BXW3 62 aa2.87□□□□□ -1.95
SMC4-217ENST00000485867 TMEM218A2RU14 115 aa2.86□□□□□ -1.95
SMC4-217ENST00000485867 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.86□□□□□ -1.95
SMC4-217ENST00000485867 TTTY13Q9BZ97 58 aa2.86□□□□□ -1.95
SMC4-217ENST00000485867 HSPB8Q9UJY1 196 aa2.86□□□□□ -1.95
SMC4-217ENST00000485867 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
SMC4-217ENST00000485867 FAM236AA0A1B0GUQ0 79 aa2.85□□□□□ -1.95
SMC4-217ENST00000485867 FAM236BA0A1B0GV22 79 aa2.85□□□□□ -1.95
SMC4-217ENST00000485867 VAMP3Q15836 100 aa2.85□□□□□ -1.95
SMC4-217ENST00000485867 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
SMC4-217ENST00000485867 IMUPQ9GZP8 106 aa2.85□□□□□ -1.95
SMC4-217ENST00000485867 IGHV6-1A0A0B4J1U7 121 aa2.84□□□□□ -1.95
SMC4-217ENST00000485867 IFITM1P13164 125 aa2.84□□□□□ -1.95
SMC4-217ENST00000485867 PET117Q6UWS5 81 aa2.84□□□□□ -1.95
SMC4-217ENST00000485867 COPS9Q8WXC6 57 aa2.84□□□□□ -1.95
SMC4-217ENST00000485867 FABP4P15090 132 aa2.83□□□□□ -1.96
SMC4-217ENST00000485867 DEFB116Q30KQ4 102 aa2.82□□□□□ -1.96
SMC4-217ENST00000485867 UQCC3Q6UW78 93 aa2.82□□□□□ -1.96
SMC4-217ENST00000485867 MUSTN1Q8IVN3 82 aa2.82□□□□□ -1.96
SMC4-217ENST00000485867 C8orf87E5RJ46 101 aa2.81□□□□□ -1.96
SMC4-217ENST00000485867 C3orf79P0CE67 100 aa2.81□□□□□ -1.96
SMC4-217ENST00000485867 NDUFV3P56181 108 aaKnown RBP2.8□□□□□ -1.96
SMC4-217ENST00000485867 SCGB1D4Q6XE38 83 aa2.8□□□□□ -1.96
SMC4-217ENST00000485867 LINC00472Q9H8W2 130 aa2.8□□□□□ -1.96
SMC4-217ENST00000485867 A0A1B0GVX0 72 aa2.79□□□□□ -1.96
SMC4-217ENST00000485867 CLLU1Q5K131 121 aa2.79□□□□□ -1.96
SMC4-217ENST00000485867 RAB37Q96AX2 223 aa2.79□□□□□ -1.96
SMC4-217ENST00000485867 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.97
SMC4-217ENST00000485867 H3BMG7 143 aa2.77□□□□□ -1.97
SMC4-217ENST00000485867 C5orf47Q569G3 176 aa2.77□□□□□ -1.97
SMC4-217ENST00000485867 YPEL4Q96NS1 127 aa2.77□□□□□ -1.97
SMC4-217ENST00000485867 C12orf57Q99622 126 aa2.77□□□□□ -1.97
SMC4-217ENST00000485867 SYS1-DBNDD2H3BUS1 97 aa2.76□□□□□ -1.97
SMC4-217ENST00000485867 KLKP1Q107X0 134 aa2.76□□□□□ -1.97
SMC4-217ENST00000485867 LINC01545Q5VT33 79 aa2.76□□□□□ -1.97
SMC4-217ENST00000485867 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
SMC4-217ENST00000485867 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
SMC4-217ENST00000485867 IGKV3D-7A0A0C4DH55 119 aa2.75□□□□□ -1.97
SMC4-217ENST00000485867 TRBV7-4A0A0J9YYF1 115 aa2.75□□□□□ -1.97
SMC4-217ENST00000485867 TRGC2P03986 189 aa2.75□□□□□ -1.97
SMC4-217ENST00000485867 BVES-AS1Q5T3Y7 98 aa2.75□□□□□ -1.97
SMC4-217ENST00000485867 LYRM7Q5U5X0 104 aa2.75□□□□□ -1.97
SMC4-217ENST00000485867 DSCR8Q96T75 97 aa2.75□□□□□ -1.97
SMC4-217ENST00000485867 MT1XP80297 61 aa2.73□□□□□ -1.97
SMC4-217ENST00000485867 OCR1Q9BZK8 76 aa2.72□□□□□ -1.97
SMC4-217ENST00000485867 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
SMC4-217ENST00000485867 FABP2P12104 132 aa2.71□□□□□ -1.98
SMC4-217ENST00000485867 ANKRD29Q8N6D5 301 aa2.71□□□□□ -1.98
SMC4-217ENST00000485867 TRACP01848 142 aa2.7□□□□□ -1.98
SMC4-217ENST00000485867 APOC3P02656 99 aa2.7□□□□□ -1.98
SMC4-217ENST00000485867 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
SMC4-217ENST00000485867 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
SMC4-217ENST00000485867 A0A1B0GV72 72 aa2.69□□□□□ -1.98
SMC4-217ENST00000485867 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
SMC4-217ENST00000485867 SNCGO76070 127 aa2.69□□□□□ -1.98
SMC4-217ENST00000485867 SNAPINO95295 136 aa2.69□□□□□ -1.98
SMC4-217ENST00000485867 CCKP06307 115 aa2.69□□□□□ -1.98
SMC4-217ENST00000485867 CSAG1Q6PB30 78 aa2.69□□□□□ -1.98
SMC4-217ENST00000485867 PRR15Q8IV56 129 aa2.69□□□□□ -1.98
SMC4-217ENST00000485867 C8orf17Q9NRJ1 99 aa2.69□□□□□ -1.98
SMC4-217ENST00000485867 J3KT08 172 aa2.68□□□□□ -1.98
SMC4-217ENST00000485867 LCA10Q71F78 164 aa2.68□□□□□ -1.98
SMC4-217ENST00000485867 C4orf26Q17RF5 130 aa2.67□□□□□ -1.98
SMC4-217ENST00000485867 C7orf65Q6ZTY9 151 aa2.67□□□□□ -1.98
SMC4-217ENST00000485867 SVBPQ8N300 66 aa2.67□□□□□ -1.98
SMC4-217ENST00000485867 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
SMC4-217ENST00000485867 S4R3F8 94 aa2.67□□□□□ -1.98
SMC4-217ENST00000485867 H0YGX0 51 aa2.66□□□□□ -1.98
SMC4-217ENST00000485867 NDUFB1O75438 58 aa2.66□□□□□ -1.98
SMC4-217ENST00000485867 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
SMC4-217ENST00000485867 C2orf91Q6ZV80 131 aa2.66□□□□□ -1.98
SMC4-217ENST00000485867 Q6ZVQ6 151 aa2.66□□□□□ -1.98
SMC4-217ENST00000485867 A0A1B0GX51 115 aa2.65□□□□□ -1.99
SMC4-217ENST00000485867 ATOH7Q8N100 152 aa2.65□□□□□ -1.99
SMC4-217ENST00000485867 RBM3P98179 157 aaKnown RBP2.64□□□□□ -1.99
SMC4-217ENST00000485867 NDUFA5Q16718 116 aa2.64□□□□□ -1.99
SMC4-217ENST00000485867 KRTDAPP60985 99 aa2.63□□□□□ -1.99
SMC4-217ENST00000485867 VPS25Q9BRG1 176 aa2.63□□□□□ -1.99
SMC4-217ENST00000485867 MRPL34Q9BQ48 92 aaKnown RBP2.62□□□□□ -1.99
SMC4-217ENST00000485867 MT4P47944 62 aa2.61□□□□□ -1.99
SMC4-217ENST00000485867 Q5W150 140 aa2.61□□□□□ -1.99
SMC4-217ENST00000485867 TMEM254Q8TBM7 123 aa2.61□□□□□ -1.99
SMC4-217ENST00000485867 MMP24-AS1A0A0U1RRL7 71 aa2.6□□□□□ -1.99
SMC4-217ENST00000485867 ORMDL1Q9P0S3 153 aa2.6□□□□□ -1.99
SMC4-217ENST00000485867 NDUFS5O43920 106 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms