RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 C9orf92A6NGG3 77 aa9.67□□□□□ -0.86
CHMP3-207ENST00000485465 DSCR10P59022 87 aa9.67□□□□□ -0.86
CHMP3-207ENST00000485465 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
CHMP3-207ENST00000485465 NDUFB1O75438 58 aa9.66□□□□□ -0.86
CHMP3-207ENST00000485465 LPAP08519 4548 aa9.65□□□□□ -0.86
CHMP3-207ENST00000485465 IGHV6-1A0A0B4J1U7 121 aa9.65□□□□□ -0.86
CHMP3-207ENST00000485465 IGKV3D-7A0A0C4DH55 119 aa9.65□□□□□ -0.86
CHMP3-207ENST00000485465 K7ERU9 68 aa9.63□□□□□ -0.87
CHMP3-207ENST00000485465 CDIP1Q9H305 208 aa9.63□□□□□ -0.87
CHMP3-207ENST00000485465 PRR15Q8IV56 129 aa9.62□□□□□ -0.87
CHMP3-207ENST00000485465 LCE2BO14633 110 aa9.61□□□□□ -0.87
CHMP3-207ENST00000485465 LINC00313P59037 77 aa9.61□□□□□ -0.87
CHMP3-207ENST00000485465 C8orf87E5RJ46 101 aa9.6□□□□□ -0.87
CHMP3-207ENST00000485465 K7EQZ3 153 aa9.6□□□□□ -0.87
CHMP3-207ENST00000485465 CXCL6P80162 114 aa9.6□□□□□ -0.87
CHMP3-207ENST00000485465 NOTCH2NLQ7Z3S9 236 aa9.6□□□□□ -0.87
CHMP3-207ENST00000485465 XP32Q5T750 250 aa9.59□□□□□ -0.87
CHMP3-207ENST00000485465 LINC00643Q86TS7 51 aa9.58□□□□□ -0.88
CHMP3-207ENST00000485465 Q8N9L7 120 aa9.58□□□□□ -0.88
CHMP3-207ENST00000485465 ATP5EP2Q5VTU8 51 aa9.56□□□□□ -0.88
CHMP3-207ENST00000485465 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
CHMP3-207ENST00000485465 LRP2P98164 4655 aa9.55□□□□□ -0.88
CHMP3-207ENST00000485465 KRTAP16-1A8MUX0 517 aa9.53□□□□□ -0.88
CHMP3-207ENST00000485465 MMP24-AS1A0A0U1RRL7 71 aa9.52□□□□□ -0.89
CHMP3-207ENST00000485465 C20orf166-AS1Q96NR2 134 aa9.48□□□□□ -0.89
CHMP3-207ENST00000485465 A8MUU9 505 aa9.47□□□□□ -0.89
CHMP3-207ENST00000485465 RPL37P61927 97 aaKnown RBP9.47□□□□□ -0.89
CHMP3-207ENST00000485465 Q75L30 129 aa9.47□□□□□ -0.89
CHMP3-207ENST00000485465 hDV103S1A0JD37 113 aa9.46□□□□□ -0.9
CHMP3-207ENST00000485465 TMEM254Q8TBM7 123 aa9.45□□□□□ -0.9
CHMP3-207ENST00000485465 HCG22E2RYF7 251 aa9.44□□□□□ -0.9
CHMP3-207ENST00000485465 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
CHMP3-207ENST00000485465 CASC2Q6XLA1 102 aa9.44□□□□□ -0.9
CHMP3-207ENST00000485465 WFDC13Q8IUB5 93 aa9.44□□□□□ -0.9
CHMP3-207ENST00000485465 MRPL34Q9BQ48 92 aaKnown RBP9.43□□□□□ -0.9
CHMP3-207ENST00000485465 MUC17Q685J3 4493 aa9.42□□□□□ -0.9
CHMP3-207ENST00000485465 SEC61BP60468 96 aaKnown RBP9.41□□□□□ -0.9
CHMP3-207ENST00000485465 Q8N9P0 234 aaPredicted RBP9.41□□□□□ -0.9
CHMP3-207ENST00000485465 MT-ATP8P03928 68 aa9.37□□□□□ -0.91
CHMP3-207ENST00000485465 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
CHMP3-207ENST00000485465 UBR4Q5T4S7 5183 aa9.37□□□□□ -0.91
CHMP3-207ENST00000485465 A0A087WVE0 104 aa9.36□□□□□ -0.91
CHMP3-207ENST00000485465 ATP11AUNQ6ZP68 121 aa9.36□□□□□ -0.91
CHMP3-207ENST00000485465 NDUFS5O43920 106 aa9.33□□□□□ -0.92
CHMP3-207ENST00000485465 IMUPQ9GZP8 106 aa9.32□□□□□ -0.92
CHMP3-207ENST00000485465 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
CHMP3-207ENST00000485465 RNF213Q63HN8 5207 aa9.27□□□□□ -0.93
CHMP3-207ENST00000485465 KRTAP4-1Q9BYQ7 146 aa9.23□□□□□ -0.93
CHMP3-207ENST00000485465 TP53AIP1Q9HCN2 124 aa9.23□□□□□ -0.93
CHMP3-207ENST00000485465 Q5W150 140 aa9.2□□□□□ -0.94
CHMP3-207ENST00000485465 SCGB1A1P11684 91 aa9.15□□□□□ -0.94
CHMP3-207ENST00000485465 FAM236AA0A1B0GUQ0 79 aa9.14□□□□□ -0.95
CHMP3-207ENST00000485465 FAM236BA0A1B0GV22 79 aa9.14□□□□□ -0.95
CHMP3-207ENST00000485465 UQCRQO14949 82 aa9.13□□□□□ -0.95
CHMP3-207ENST00000485465 MUC2Q02817 5179 aa9.13□□□□□ -0.95
CHMP3-207ENST00000485465 OCR1Q9BZK8 76 aa9.12□□□□□ -0.95
CHMP3-207ENST00000485465 SPINK7P58062 85 aa9.1□□□□□ -0.95
CHMP3-207ENST00000485465 TRAV22A0A0B4J277 110 aa9.08□□□□□ -0.96
CHMP3-207ENST00000485465 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
CHMP3-207ENST00000485465 LCE2CQ5TA81 110 aa9.06□□□□□ -0.96
CHMP3-207ENST00000485465 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
CHMP3-207ENST00000485465 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
CHMP3-207ENST00000485465 H0Y9P7 68 aa9.04□□□□□ -0.96
CHMP3-207ENST00000485465 C7orf65Q6ZTY9 151 aa9.03□□□□□ -0.96
CHMP3-207ENST00000485465 SMIM20Q8N5G0 67 aa9.03□□□□□ -0.96
CHMP3-207ENST00000485465 ATOX1O00244 68 aa9.02□□□□□ -0.97
CHMP3-207ENST00000485465 HRES1P13985 223 aa9.01□□□□□ -0.97
CHMP3-207ENST00000485465 TRAV7A0A075B6U4 112 aa9□□□□□ -0.97
CHMP3-207ENST00000485465 C5orf47Q569G3 176 aa9□□□□□ -0.97
CHMP3-207ENST00000485465 LOC101927531A0A1B0GV80 90 aa8.98□□□□□ -0.97
CHMP3-207ENST00000485465 MP68P56378 58 aa8.98□□□□□ -0.97
CHMP3-207ENST00000485465 C1orf64Q8NEQ6 169 aa8.95□□□□□ -0.98
CHMP3-207ENST00000485465 MPLKIPQ8TAP9 179 aa8.95□□□□□ -0.98
CHMP3-207ENST00000485465 CYP4F30PQ9H0H9 118 aa8.95□□□□□ -0.98
CHMP3-207ENST00000485465 KRTAP19-2Q3LHN2 52 aa8.94□□□□□ -0.98
CHMP3-207ENST00000485465 LINC00208Q96KT6 92 aa8.94□□□□□ -0.98
CHMP3-207ENST00000485465 A0A0U1RQV1 116 aa8.93□□□□□ -0.98
CHMP3-207ENST00000485465 H3BPC8 53 aa8.92□□□□□ -0.98
CHMP3-207ENST00000485465 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
CHMP3-207ENST00000485465 SERP2Q8N6R1 65 aa8.9□□□□□ -0.98
CHMP3-207ENST00000485465 COX6B2Q6YFQ2 88 aa8.87□□□□□ -0.99
CHMP3-207ENST00000485465 FAT4Q6V0I7 4981 aa8.86□□□□□ -0.99
CHMP3-207ENST00000485465 FAM236DA0A1B0GTK5 79 aa8.85□□□□□ -0.99
CHMP3-207ENST00000485465 FAM236CP0DP71 79 aa8.85□□□□□ -0.99
CHMP3-207ENST00000485465 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
CHMP3-207ENST00000485465 C4orf26Q17RF5 130 aa8.84□□□□□ -0.99
CHMP3-207ENST00000485465 KLKP1Q107X0 134 aa8.82□□□□□ -1
CHMP3-207ENST00000485465 COX7CP15954 63 aa8.79□□□□□ -1
CHMP3-207ENST00000485465 ANAPC13Q9BS18 74 aa8.78□□□□□ -1
CHMP3-207ENST00000485465 C20orf197Q8N268 126 aa8.77□□□□□ -1.01
CHMP3-207ENST00000485465 SNURFQ9Y675 71 aa8.76□□□□□ -1.01
CHMP3-207ENST00000485465 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
CHMP3-207ENST00000485465 FLGP20930 4061 aaPredicted RBP8.73□□□□□ -1.01
CHMP3-207ENST00000485465 MT1HP80294 61 aa8.72□□□□□ -1.01
CHMP3-207ENST00000485465 H1FX-AS1Q4G0G2 97 aa8.72□□□□□ -1.01
CHMP3-207ENST00000485465 A8MUN3 132 aa8.61□□□□□ -1.03
CHMP3-207ENST00000485465 M0R2T5 61 aa8.6□□□□□ -1.03
CHMP3-207ENST00000485465 CCDC179H3BU77 68 aa8.59□□□□□ -1.03
CHMP3-207ENST00000485465 NDUFC1O43677 76 aa8.57□□□□□ -1.04
CHMP3-207ENST00000485465 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 626.1 ms