RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	LINC00304	Q8N9R0	145 aa		2.74	□□□□□ -1.97
SFPQ-208	ENST00000485365	DEFB105A	Q8NG35	78 aa		2.74	□□□□□ -1.97
SFPQ-208	ENST00000485365	COPS9	Q8WXC6	57 aa		2.74	□□□□□ -1.97
SFPQ-208	ENST00000485365	TRBV7-7	A0A0K0K1E9	115 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	FAM240A	A0A1B0GVK7	77 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	TIMM17B	O60830	172 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	ERC2-IT1	O76042	136 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	IGLV6-57	P01721	117 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	COX6C	P09669	75 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	KRTAP13-2	Q52LG2	175 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	C9orf153	Q5TBE3	101 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	SMIM20	Q8N5G0	67 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	SPRR4	Q96PI1	79 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	RETNLB	Q9BQ08	111 aa		2.73	□□□□□ -1.97
SFPQ-208	ENST00000485365	FAM236A	A0A1B0GUQ0	79 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	FAM236B	A0A1B0GV22	79 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	COX7B	P24311	80 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	SPRR1A	P35321	89 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	MOBP	Q13875	183 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	FAM229B	Q4G0N7	80 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	C6orf99	Q4VX62	202 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	KRTAP5-7	Q6L8G8	165 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	HRCT1	Q6UXD1	115 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	ST20-AS1	Q8NBB2	130 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365		Q9BRP9	147 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	TNXB	P22105	4242 aa		2.72	□□□□□ -1.97
SFPQ-208	ENST00000485365	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	2.71	□□□□□ -1.98
SFPQ-208	ENST00000485365		Q6ZRX8	168 aa		2.71	□□□□□ -1.98
SFPQ-208	ENST00000485365	TRAV13-2	A0A0B4J235	113 aa		2.7	□□□□□ -1.98
SFPQ-208	ENST00000485365	TRAC	P01848	142 aa		2.69	□□□□□ -1.98
SFPQ-208	ENST00000485365	ACYP1	P07311	99 aa		2.69	□□□□□ -1.98
SFPQ-208	ENST00000485365	BAALC-AS2	P0C853	105 aa		2.69	□□□□□ -1.98
SFPQ-208	ENST00000485365	SPAG11A	Q6PDA7	123 aa		2.69	□□□□□ -1.98
SFPQ-208	ENST00000485365	LINC00643	Q86TS7	51 aa		2.69	□□□□□ -1.98
SFPQ-208	ENST00000485365	SMIM11B	Q8TCY0	68 aa		2.69	□□□□□ -1.98
SFPQ-208	ENST00000485365	LAMTOR3	Q9UHA4	124 aa		2.69	□□□□□ -1.98
SFPQ-208	ENST00000485365	ELOF1	P60002	83 aa	Known RBP	2.68	□□□□□ -1.98
SFPQ-208	ENST00000485365	SSBP3-AS1	Q7Z2R9	100 aa		2.68	□□□□□ -1.98
SFPQ-208	ENST00000485365	IGKV3D-7	A0A0C4DH55	119 aa		2.67	□□□□□ -1.98
SFPQ-208	ENST00000485365	UQCRQ	O14949	82 aa		2.67	□□□□□ -1.98
SFPQ-208	ENST00000485365	SPINK1	P00995	79 aa		2.67	□□□□□ -1.98
SFPQ-208	ENST00000485365	HIST1H4A	P62805	103 aa	Known RBP	2.67	□□□□□ -1.98
SFPQ-208	ENST00000485365	LINC00483	Q53H64	154 aa		2.67	□□□□□ -1.98
SFPQ-208	ENST00000485365	IMUP	Q9GZP8	106 aa		2.67	□□□□□ -1.98
SFPQ-208	ENST00000485365		A0A0G2JQZ4	141 aa		2.66	□□□□□ -1.98
SFPQ-208	ENST00000485365		F8WEM9	126 aa		2.66	□□□□□ -1.98
SFPQ-208	ENST00000485365	ATOX1	O00244	68 aa		2.66	□□□□□ -1.98
SFPQ-208	ENST00000485365	DNAL4	O96015	105 aa		2.66	□□□□□ -1.98
SFPQ-208	ENST00000485365	COX7C	P15954	63 aa		2.66	□□□□□ -1.98
SFPQ-208	ENST00000485365		Q6JHZ5	121 aa		2.66	□□□□□ -1.98
SFPQ-208	ENST00000485365	CYSTM1	Q9H1C7	97 aa		2.66	□□□□□ -1.98
SFPQ-208	ENST00000485365	C14orf132	Q9NPU4	83 aa		2.66	□□□□□ -1.98
SFPQ-208	ENST00000485365	TRBV7-6	A0A0J9YX20	115 aa		2.65	□□□□□ -1.99
SFPQ-208	ENST00000485365	hADV29S1	A0JD25	119 aa		2.65	□□□□□ -1.99
SFPQ-208	ENST00000485365		J3KT08	172 aa		2.65	□□□□□ -1.99
SFPQ-208	ENST00000485365	CXCL6	P80162	114 aa		2.65	□□□□□ -1.99
SFPQ-208	ENST00000485365		A0A087WVE0	104 aa		2.64	□□□□□ -1.99
SFPQ-208	ENST00000485365		A0A1B0GX51	115 aa		2.64	□□□□□ -1.99
SFPQ-208	ENST00000485365	LINC00575	Q6W349	94 aa		2.64	□□□□□ -1.99
SFPQ-208	ENST00000485365		Q6ZQY7	126 aa		2.64	□□□□□ -1.99
SFPQ-208	ENST00000485365	OBSCN-AS1	Q96MR7	158 aa		2.64	□□□□□ -1.99
SFPQ-208	ENST00000485365	LINC00846	Q9NV44	126 aa		2.64	□□□□□ -1.99
SFPQ-208	ENST00000485365	HMCN2	Q8NDA2	5059 aa		2.64	□□□□□ -1.99
SFPQ-208	ENST00000485365	LPA	P08519	4548 aa		2.63	□□□□□ -1.99
SFPQ-208	ENST00000485365	LIMD2	Q9BT23	127 aa		2.63	□□□□□ -1.99
SFPQ-208	ENST00000485365	C9orf92	A6NGG3	77 aa		2.62	□□□□□ -1.99
SFPQ-208	ENST00000485365		H0YGX0	51 aa		2.62	□□□□□ -1.99
SFPQ-208	ENST00000485365	SPRR1B	P22528	89 aa		2.62	□□□□□ -1.99
SFPQ-208	ENST00000485365	TMEM258	P61165	79 aa		2.62	□□□□□ -1.99
SFPQ-208	ENST00000485365	FP248	Q71RG6	208 aa	Predicted RBP	2.62	□□□□□ -1.99
SFPQ-208	ENST00000485365	SERP2	Q8N6R1	65 aa		2.62	□□□□□ -1.99
SFPQ-208	ENST00000485365	ORMDL1	Q9P0S3	153 aa		2.62	□□□□□ -1.99
SFPQ-208	ENST00000485365	UBR4	Q5T4S7	5183 aa		2.61	□□□□□ -1.99
SFPQ-208	ENST00000485365	CCK	P06307	115 aa		2.61	□□□□□ -1.99
SFPQ-208	ENST00000485365	TPRXL	Q17RH7	258 aa		2.61	□□□□□ -1.99
SFPQ-208	ENST00000485365	C5orf47	Q569G3	176 aa		2.61	□□□□□ -1.99
SFPQ-208	ENST00000485365	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	2.61	□□□□□ -1.99
SFPQ-208	ENST00000485365	DSCR8	Q96T75	97 aa		2.61	□□□□□ -1.99
SFPQ-208	ENST00000485365	LRP2	P98164	4655 aa		2.6	□□□□□ -1.99
SFPQ-208	ENST00000485365	IGLV5-48	A0A075B6I7	105 aa		2.6	□□□□□ -1.99
SFPQ-208	ENST00000485365	ATP5EP2	Q5VTU8	51 aa		2.6	□□□□□ -1.99
SFPQ-208	ENST00000485365	RPS29	P62273	56 aa	Known RBP	2.59	□□□□□ -1.99
SFPQ-208	ENST00000485365	RPS28	P62857	69 aa	Known RBP	2.59	□□□□□ -1.99
SFPQ-208	ENST00000485365		A0A0U1RQV1	116 aa		2.58	□□□□□ -2
SFPQ-208	ENST00000485365	FAM236D	A0A1B0GTK5	79 aa		2.58	□□□□□ -2
SFPQ-208	ENST00000485365	FAM236C	P0DP71	79 aa		2.58	□□□□□ -2
SFPQ-208	ENST00000485365	CD164	Q04900	197 aa		2.58	□□□□□ -2
SFPQ-208	ENST00000485365		Q5XG85	94 aa		2.58	□□□□□ -2
SFPQ-208	ENST00000485365	IGFL1	Q6UW32	110 aa		2.58	□□□□□ -2
SFPQ-208	ENST00000485365	JMJD7-PLA2G4B	H0Y9G9	81 aa		2.57	□□□□□ -2
SFPQ-208	ENST00000485365	C4orf26	Q17RF5	130 aa		2.57	□□□□□ -2
SFPQ-208	ENST00000485365	C1orf195	Q5TG92	126 aa		2.57	□□□□□ -2
SFPQ-208	ENST00000485365		Q6ZQT0	140 aa		2.57	□□□□□ -2
SFPQ-208	ENST00000485365	C20orf197	Q8N268	126 aa		2.57	□□□□□ -2
SFPQ-208	ENST00000485365	LOC110117498	A0A087WWA1	95 aa		2.56	□□□□□ -2
SFPQ-208	ENST00000485365	TMEM256-PLSCR3	K7ERE1	68 aa		2.56	□□□□□ -2
SFPQ-208	ENST00000485365	UBL5	Q9BZL1	73 aa		2.56	□□□□□ -2
SFPQ-208	ENST00000485365	TRAV7	A0A075B6U4	112 aa		2.55	□□□□□ -2
SFPQ-208	ENST00000485365		H7BZZ5	65 aa		2.55	□□□□□ -2
SFPQ-208	ENST00000485365	RBM3	P98179	157 aa	Known RBP	2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms