RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 LINC00304Q8N9R0 145 aa10.83□□□□□ -0.67
NECTIN3-206ENST00000485303 NDUFS5O43920 106 aa10.82□□□□□ -0.68
NECTIN3-206ENST00000485303 APOBP04114 4563 aaKnown RBP10.81□□□□□ -0.68
NECTIN3-206ENST00000485303 A8MWP4 228 aa10.8□□□□□ -0.68
NECTIN3-206ENST00000485303 HCG22E2RYF7 251 aa10.8□□□□□ -0.68
NECTIN3-206ENST00000485303 PRR4Q16378 134 aa10.8□□□□□ -0.68
NECTIN3-206ENST00000485303 RPS28P62857 69 aaKnown RBP10.79□□□□□ -0.68
NECTIN3-206ENST00000485303 LIMD2Q9BT23 127 aa10.78□□□□□ -0.68
NECTIN3-206ENST00000485303 CASC2Q6XLA1 102 aa10.78□□□□□ -0.68
NECTIN3-206ENST00000485303 PRR15Q8IV56 129 aa10.78□□□□□ -0.68
NECTIN3-206ENST00000485303 CD164Q04900 197 aa10.76□□□□□ -0.69
NECTIN3-206ENST00000485303 KIAA1109Q2LD37 5005 aa10.74□□□□□ -0.69
NECTIN3-206ENST00000485303 H7BZZ5 65 aa10.73□□□□□ -0.69
NECTIN3-206ENST00000485303 Q96NJ1 140 aa10.72□□□□□ -0.69
NECTIN3-206ENST00000485303 KRTAP10-4P60372 401 aaPredicted RBP10.72□□□□□ -0.69
NECTIN3-206ENST00000485303 RETNLBQ9BQ08 111 aa10.72□□□□□ -0.69
NECTIN3-206ENST00000485303 SPINK1P00995 79 aa10.71□□□□□ -0.69
NECTIN3-206ENST00000485303 TMEM254Q8TBM7 123 aa10.71□□□□□ -0.69
NECTIN3-206ENST00000485303 SERP1Q9Y6X1 66 aa10.71□□□□□ -0.69
NECTIN3-206ENST00000485303 A0A1B0GVX0 72 aa10.7□□□□□ -0.7
NECTIN3-206ENST00000485303 hDV103S1A0JD37 113 aa10.69□□□□□ -0.7
NECTIN3-206ENST00000485303 PSPHP1O15172 72 aa10.68□□□□□ -0.7
NECTIN3-206ENST00000485303 C8orf17Q9NRJ1 99 aa10.67□□□□□ -0.7
NECTIN3-206ENST00000485303 SPAG11AQ6PDA7 123 aa10.65□□□□□ -0.7
NECTIN3-206ENST00000485303 EPPK1P58107 5090 aaKnown RBP10.65□□□□□ -0.7
NECTIN3-206ENST00000485303 NOTCH2NLQ7Z3S9 236 aa10.65□□□□□ -0.7
NECTIN3-206ENST00000485303 FP248Q71RG6 208 aaPredicted RBP10.64□□□□□ -0.71
NECTIN3-206ENST00000485303 Q8N1X5 172 aa10.64□□□□□ -0.71
NECTIN3-206ENST00000485303 SMIM26A0A096LP01 95 aa10.64□□□□□ -0.71
NECTIN3-206ENST00000485303 SPTSSBQ8NFR3 76 aa10.63□□□□□ -0.71
NECTIN3-206ENST00000485303 MMP24-AS1A0A0U1RRL7 71 aa10.62□□□□□ -0.71
NECTIN3-206ENST00000485303 LINC00313P59037 77 aa10.6□□□□□ -0.71
NECTIN3-206ENST00000485303 KLKP1Q107X0 134 aa10.59□□□□□ -0.71
NECTIN3-206ENST00000485303 RYR1P21817 5038 aa10.58□□□□□ -0.72
NECTIN3-206ENST00000485303 HSPG2P98160 4391 aa10.57□□□□□ -0.72
NECTIN3-206ENST00000485303 KRTAP17-1Q9BYP8 105 aa10.57□□□□□ -0.72
NECTIN3-206ENST00000485303 C9orf92A6NGG3 77 aa10.57□□□□□ -0.72
NECTIN3-206ENST00000485303 PMAIP1Q13794 54 aa10.56□□□□□ -0.72
NECTIN3-206ENST00000485303 NDUFC1O43677 76 aa10.56□□□□□ -0.72
NECTIN3-206ENST00000485303 OCR1Q9BZK8 76 aa10.56□□□□□ -0.72
NECTIN3-206ENST00000485303 MRPL34Q9BQ48 92 aaKnown RBP10.55□□□□□ -0.72
NECTIN3-206ENST00000485303 MP68P56378 58 aa10.54□□□□□ -0.72
NECTIN3-206ENST00000485303 LINC00208Q96KT6 92 aa10.53□□□□□ -0.72
NECTIN3-206ENST00000485303 LRP1Q07954 4544 aaKnown RBP10.52□□□□□ -0.73
NECTIN3-206ENST00000485303 KRTAP29-1A8MX34 341 aaPredicted RBP10.51□□□□□ -0.73
NECTIN3-206ENST00000485303 ASB16-AS1Q495Z4 193 aa10.51□□□□□ -0.73
NECTIN3-206ENST00000485303 H0Y9P7 68 aa10.5□□□□□ -0.73
NECTIN3-206ENST00000485303 C8orf87E5RJ46 101 aa10.48□□□□□ -0.73
NECTIN3-206ENST00000485303 A8MU10 97 aa10.48□□□□□ -0.73
NECTIN3-206ENST00000485303 KRTAP4-5Q9BYR2 181 aa10.47□□□□□ -0.73
NECTIN3-206ENST00000485303 ATP5EP56381 51 aaPredicted RBP10.43□□□□□ -0.74
NECTIN3-206ENST00000485303 TRAV22A0A0B4J277 110 aa10.42□□□□□ -0.74
NECTIN3-206ENST00000485303 J3QL48 77 aa10.4□□□□□ -0.74
NECTIN3-206ENST00000485303 KRTAP10-8P60410 259 aa10.4□□□□□ -0.74
NECTIN3-206ENST00000485303 MYCBP2O75592 4640 aa10.4□□□□□ -0.74
NECTIN3-206ENST00000485303 C1orf64Q8NEQ6 169 aa10.39□□□□□ -0.75
NECTIN3-206ENST00000485303 RPS29P62273 56 aaKnown RBP10.39□□□□□ -0.75
NECTIN3-206ENST00000485303 PCOTHQ58A44 107 aa10.39□□□□□ -0.75
NECTIN3-206ENST00000485303 TP53AIP1Q9HCN2 124 aa10.39□□□□□ -0.75
NECTIN3-206ENST00000485303 IGLV7-46A0A075B6I9 117 aa10.32□□□□□ -0.76
NECTIN3-206ENST00000485303 IGKV2D-30A0A075B6S6 120 aa10.31□□□□□ -0.76
NECTIN3-206ENST00000485303 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
NECTIN3-206ENST00000485303 A8MUN3 132 aa10.29□□□□□ -0.76
NECTIN3-206ENST00000485303 Q5W150 140 aa10.29□□□□□ -0.76
NECTIN3-206ENST00000485303 MT1HL1P0DM35 61 aa10.27□□□□□ -0.76
NECTIN3-206ENST00000485303 CHKB-CPT1BH3BT56 60 aa10.27□□□□□ -0.77
NECTIN3-206ENST00000485303 PKHD1L1Q86WI1 4243 aa10.24□□□□□ -0.77
NECTIN3-206ENST00000485303 KRTAP16-1A8MUX0 517 aa10.21□□□□□ -0.77
NECTIN3-206ENST00000485303 Q8N9P0 234 aaPredicted RBP10.21□□□□□ -0.77
NECTIN3-206ENST00000485303 RBM12B-AS1Q9P1G2 102 aa10.2□□□□□ -0.78
NECTIN3-206ENST00000485303 PRR15LQ9BU68 103 aa10.18□□□□□ -0.78
NECTIN3-206ENST00000485303 H3BPC8 53 aa10.18□□□□□ -0.78
NECTIN3-206ENST00000485303 FAT3Q8TDW7 4589 aa10.16□□□□□ -0.78
NECTIN3-206ENST00000485303 H3BS24 57 aa10.15□□□□□ -0.78
NECTIN3-206ENST00000485303 BIRC6Q9NR09 4857 aa10.15□□□□□ -0.79
NECTIN3-206ENST00000485303 LOC101927531A0A1B0GV80 90 aa10.14□□□□□ -0.79
NECTIN3-206ENST00000485303 A6NED7 52 aa10.14□□□□□ -0.79
NECTIN3-206ENST00000485303 ZCCHC13Q8WW36 166 aaKnown RBP10.13□□□□□ -0.79
NECTIN3-206ENST00000485303 ATP11AUNQ6ZP68 121 aa10.11□□□□□ -0.79
NECTIN3-206ENST00000485303 HERC2O95714 4834 aa10.1□□□□□ -0.79
NECTIN3-206ENST00000485303 TNXBP22105 4242 aa10.1□□□□□ -0.79
NECTIN3-206ENST00000485303 ABCA13Q86UQ4 5058 aa10.09□□□□□ -0.79
NECTIN3-206ENST00000485303 CYP4F30PQ9H0H9 118 aa10.08□□□□□ -0.8
NECTIN3-206ENST00000485303 A8MUU9 505 aa10.03□□□□□ -0.8
NECTIN3-206ENST00000485303 C20orf166-AS1Q96NR2 134 aa10.03□□□□□ -0.8
NECTIN3-206ENST00000485303 PRAC1Q96KF2 57 aa10.02□□□□□ -0.8
NECTIN3-206ENST00000485303 C7orf65Q6ZTY9 151 aa10.02□□□□□ -0.81
NECTIN3-206ENST00000485303 KRTAP13-3Q3SY46 172 aa10.01□□□□□ -0.81
NECTIN3-206ENST00000485303 HRES1P13985 223 aa10□□□□□ -0.81
NECTIN3-206ENST00000485303 XP32Q5T750 250 aa10□□□□□ -0.81
NECTIN3-206ENST00000485303 Q75L30 129 aa9.97□□□□□ -0.81
NECTIN3-206ENST00000485303 SPINK7P58062 85 aa9.96□□□□□ -0.81
NECTIN3-206ENST00000485303 COA5Q86WW8 74 aa9.96□□□□□ -0.81
NECTIN3-206ENST00000485303 Q1T7F1 81 aa9.96□□□□□ -0.82
NECTIN3-206ENST00000485303 KTN1-AS1Q86SY8 53 aa9.94□□□□□ -0.82
NECTIN3-206ENST00000485303 RPL37P61927 97 aaKnown RBP9.92□□□□□ -0.82
NECTIN3-206ENST00000485303 SPANXA2-OT1Q8N9U9 137 aa9.9□□□□□ -0.82
NECTIN3-206ENST00000485303 Q5VV11 94 aa9.87□□□□□ -0.83
NECTIN3-206ENST00000485303 TPRXLQ17RH7 258 aa9.85□□□□□ -0.83
NECTIN3-206ENST00000485303 ADM2Q7Z4H4 148 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms