RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 SS18L2Q9UHA2 77 aa3.62□□□□□ -1.83
NCL-209ENST00000484328 A0A087WSZ3 146 aa3.61□□□□□ -1.83
NCL-209ENST00000484328 C1orf195Q5TG92 126 aa3.61□□□□□ -1.83
NCL-209ENST00000484328 Q96NJ1 140 aa3.6□□□□□ -1.83
NCL-209ENST00000484328 TPRXLQ17RH7 258 aa3.59□□□□□ -1.83
NCL-209ENST00000484328 ETDBQ3ZM63 59 aa3.59□□□□□ -1.83
NCL-209ENST00000484328 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
NCL-209ENST00000484328 VPS25Q9BRG1 176 aa3.59□□□□□ -1.83
NCL-209ENST00000484328 IGLV7-46A0A075B6I9 117 aa3.58□□□□□ -1.84
NCL-209ENST00000484328 PRR4Q16378 134 aa3.58□□□□□ -1.84
NCL-209ENST00000484328 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
NCL-209ENST00000484328 LINC00472Q9H8W2 130 aa3.58□□□□□ -1.84
NCL-209ENST00000484328 LRP2P98164 4655 aa3.54□□□□□ -1.84
NCL-209ENST00000484328 FAM240AA0A1B0GVK7 77 aa3.54□□□□□ -1.84
NCL-209ENST00000484328 LINC00846Q9NV44 126 aa3.54□□□□□ -1.84
NCL-209ENST00000484328 LPAP08519 4548 aa3.54□□□□□ -1.84
NCL-209ENST00000484328 J3KT08 172 aa3.53□□□□□ -1.84
NCL-209ENST00000484328 IGKV4-1P06312 121 aa3.53□□□□□ -1.84
NCL-209ENST00000484328 Q6ZVQ6 151 aa3.53□□□□□ -1.84
NCL-209ENST00000484328 SIGMAR1Q99720 223 aa3.53□□□□□ -1.84
NCL-209ENST00000484328 NREPQ16612 68 aa3.52□□□□□ -1.85
NCL-209ENST00000484328 DEFB116Q30KQ4 102 aa3.52□□□□□ -1.85
NCL-209ENST00000484328 A0A1B0GVX0 72 aa3.51□□□□□ -1.85
NCL-209ENST00000484328 A8MWP4 228 aa3.51□□□□□ -1.85
NCL-209ENST00000484328 ACYP1P07311 99 aa3.51□□□□□ -1.85
NCL-209ENST00000484328 DSCR10P59022 87 aa3.51□□□□□ -1.85
NCL-209ENST00000484328 UBL5Q9BZL1 73 aa3.51□□□□□ -1.85
NCL-209ENST00000484328 CDIP1Q9H305 208 aa3.5□□□□□ -1.85
NCL-209ENST00000484328 IGKV3D-7A0A0C4DH55 119 aa3.49□□□□□ -1.85
NCL-209ENST00000484328 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
NCL-209ENST00000484328 KRTAP16-1A8MUX0 517 aa3.49□□□□□ -1.85
NCL-209ENST00000484328 C8orf87E5RJ46 101 aa3.49□□□□□ -1.85
NCL-209ENST00000484328 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
NCL-209ENST00000484328 K7EQZ3 153 aa3.48□□□□□ -1.85
NCL-209ENST00000484328 BPY2O14599 106 aa3.48□□□□□ -1.85
NCL-209ENST00000484328 NOTCH2NLQ7Z3S9 236 aa3.48□□□□□ -1.85
NCL-209ENST00000484328 PRR15Q8IV56 129 aa3.48□□□□□ -1.85
NCL-209ENST00000484328 IGHV6-1A0A0B4J1U7 121 aa3.47□□□□□ -1.85
NCL-209ENST00000484328 NDUFB1O75438 58 aa3.47□□□□□ -1.85
NCL-209ENST00000484328 CXCL6P80162 114 aa3.47□□□□□ -1.85
NCL-209ENST00000484328 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
NCL-209ENST00000484328 C20orf166-AS1Q96NR2 134 aa3.47□□□□□ -1.85
NCL-209ENST00000484328 MMP24-AS1A0A0U1RRL7 71 aa3.46□□□□□ -1.86
NCL-209ENST00000484328 A8MUU9 505 aa3.46□□□□□ -1.86
NCL-209ENST00000484328 J3QR89 54 aa3.46□□□□□ -1.86
NCL-209ENST00000484328 LINC00313P59037 77 aa3.46□□□□□ -1.86
NCL-209ENST00000484328 RPL37P61927 97 aaKnown RBP3.46□□□□□ -1.86
NCL-209ENST00000484328 ATP5EP2Q5VTU8 51 aa3.46□□□□□ -1.86
NCL-209ENST00000484328 Q75L30 129 aa3.46□□□□□ -1.86
NCL-209ENST00000484328 C8orf17Q9NRJ1 99 aa3.46□□□□□ -1.86
NCL-209ENST00000484328 Q8N9L7 120 aa3.45□□□□□ -1.86
NCL-209ENST00000484328 MUC17Q685J3 4493 aa3.44□□□□□ -1.86
NCL-209ENST00000484328 LINC00643Q86TS7 51 aa3.44□□□□□ -1.86
NCL-209ENST00000484328 Q8N9P0 234 aaPredicted RBP3.44□□□□□ -1.86
NCL-209ENST00000484328 K7ERU9 68 aa3.43□□□□□ -1.86
NCL-209ENST00000484328 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
NCL-209ENST00000484328 TMEM254Q8TBM7 123 aa3.42□□□□□ -1.86
NCL-209ENST00000484328 hDV103S1A0JD37 113 aa3.41□□□□□ -1.86
NCL-209ENST00000484328 HCG22E2RYF7 251 aa3.41□□□□□ -1.86
NCL-209ENST00000484328 PCOTHQ58A44 107 aa3.41□□□□□ -1.86
NCL-209ENST00000484328 MRPL34Q9BQ48 92 aaKnown RBP3.41□□□□□ -1.86
NCL-209ENST00000484328 CASC2Q6XLA1 102 aa3.4□□□□□ -1.87
NCL-209ENST00000484328 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
NCL-209ENST00000484328 KRTAP4-1Q9BYQ7 146 aa3.39□□□□□ -1.87
NCL-209ENST00000484328 ATP11AUNQ6ZP68 121 aa3.38□□□□□ -1.87
NCL-209ENST00000484328 WFDC13Q8IUB5 93 aa3.38□□□□□ -1.87
NCL-209ENST00000484328 ZCCHC13Q8WW36 166 aaKnown RBP3.37□□□□□ -1.87
NCL-209ENST00000484328 A0A087WVE0 104 aa3.36□□□□□ -1.87
NCL-209ENST00000484328 HIST1H4AP62805 103 aaKnown RBP3.36□□□□□ -1.87
NCL-209ENST00000484328 IMUPQ9GZP8 106 aa3.36□□□□□ -1.87
NCL-209ENST00000484328 RNF213Q63HN8 5207 aa3.36□□□□□ -1.87
NCL-209ENST00000484328 MUC2Q02817 5179 aa3.35□□□□□ -1.87
NCL-209ENST00000484328 NDUFS5O43920 106 aa3.34□□□□□ -1.87
NCL-209ENST00000484328 MT-ATP8P03928 68 aa3.34□□□□□ -1.87
NCL-209ENST00000484328 Q5W150 140 aa3.33□□□□□ -1.88
NCL-209ENST00000484328 TP53AIP1Q9HCN2 124 aa3.33□□□□□ -1.88
NCL-209ENST00000484328 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
NCL-209ENST00000484328 HRES1P13985 223 aa3.3□□□□□ -1.88
NCL-209ENST00000484328 SPINK7P58062 85 aa3.3□□□□□ -1.88
NCL-209ENST00000484328 MPLKIPQ8TAP9 179 aa3.3□□□□□ -1.88
NCL-209ENST00000484328 OCR1Q9BZK8 76 aa3.3□□□□□ -1.88
NCL-209ENST00000484328 TRAV22A0A0B4J277 110 aa3.29□□□□□ -1.88
NCL-209ENST00000484328 UQCRQO14949 82 aa3.29□□□□□ -1.88
NCL-209ENST00000484328 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
NCL-209ENST00000484328 KRTAP9-3Q9BYQ3 159 aa3.29□□□□□ -1.88
NCL-209ENST00000484328 A0A0U1RQV1 116 aa3.28□□□□□ -1.88
NCL-209ENST00000484328 IGKV2-30P06310 120 aa3.28□□□□□ -1.88
NCL-209ENST00000484328 C7orf65Q6ZTY9 151 aa3.28□□□□□ -1.88
NCL-209ENST00000484328 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.89
NCL-209ENST00000484328 FAM236AA0A1B0GUQ0 79 aa3.27□□□□□ -1.89
NCL-209ENST00000484328 FAM236BA0A1B0GV22 79 aa3.27□□□□□ -1.89
NCL-209ENST00000484328 IGKV2D-30A0A075B6S6 120 aa3.25□□□□□ -1.89
NCL-209ENST00000484328 ATOX1O00244 68 aa3.25□□□□□ -1.89
NCL-209ENST00000484328 LOC101927531A0A1B0GV80 90 aa3.24□□□□□ -1.89
NCL-209ENST00000484328 H0Y9P7 68 aa3.24□□□□□ -1.89
NCL-209ENST00000484328 SMIM20Q8N5G0 67 aa3.24□□□□□ -1.89
NCL-209ENST00000484328 SCGB1A1P11684 91 aa3.23□□□□□ -1.89
NCL-209ENST00000484328 C5orf47Q569G3 176 aa3.23□□□□□ -1.89
NCL-209ENST00000484328 CYP4F30PQ9H0H9 118 aa3.23□□□□□ -1.89
NCL-209ENST00000484328 RBM12B-AS1Q9P1G2 102 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 412.2 ms