RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 NIPBLQ6KC79 2804 aaeCLIP1.81□□□□□ -2.126e-7■■■□□ 15
FXN-204ENST00000484259 IAPPP10997 89 aa1.81□□□□□ -2.12
FXN-204ENST00000484259 SPINK13Q1W4C9 94 aa1.81□□□□□ -2.12
FXN-204ENST00000484259 Q8IZM0 81 aa1.81□□□□□ -2.12
FXN-204ENST00000484259 STAB1Q9NY15 2570 aa1.8□□□□□ -2.12
FXN-204ENST00000484259 ZANQ9Y493 2812 aa1.8□□□□□ -2.12
FXN-204ENST00000484259 H3BSH0 61 aa1.8□□□□□ -2.12
FXN-204ENST00000484259 CRIP1P50238 77 aa1.8□□□□□ -2.12
FXN-204ENST00000484259 KRTAP12-2P59991 146 aa1.8□□□□□ -2.12
FXN-204ENST00000484259 MINOS1Q5TGZ0 78 aa1.8□□□□□ -2.12
FXN-204ENST00000484259 NBPF19A0A087WUL8 3843 aa1.79□□□□□ -2.12
FXN-204ENST00000484259 PIGYQ3MUY2 71 aa1.79□□□□□ -2.12
FXN-204ENST00000484259 LINC00575Q6W349 94 aa1.79□□□□□ -2.12
FXN-204ENST00000484259 BRD3OSQ6XYD6 125 aa1.79□□□□□ -2.12
FXN-204ENST00000484259 CDKN2A-AS1Q9UH64 79 aa1.79□□□□□ -2.12
FXN-204ENST00000484259 CELSR1Q9NYQ6 3014 aa1.78□□□□□ -2.12
FXN-204ENST00000484259 MXRA5Q9NR99 2828 aa1.78□□□□□ -2.12
FXN-204ENST00000484259 H3BUX3 64 aa1.78□□□□□ -2.12
FXN-204ENST00000484259 ARHGAP5-AS1Q96IT6 56 aa1.78□□□□□ -2.12
FXN-204ENST00000484259 CSMD1Q96PZ7 3565 aa1.78□□□□□ -2.12
FXN-204ENST00000484259 NF1P21359 2839 aa1.78□□□□□ -2.12
FXN-204ENST00000484259 CSMD2Q7Z408 3487 aa1.78□□□□□ -2.13
FXN-204ENST00000484259 IGFL1Q6UW32 110 aa1.77□□□□□ -2.13
FXN-204ENST00000484259 WNK1Q9H4A3 2382 aa1.77□□□□□ -2.13
FXN-204ENST00000484259 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
FXN-204ENST00000484259 KRTAP1-4P0C5Y4 121 aa1.76□□□□□ -2.13
FXN-204ENST00000484259 MT3P25713 68 aa1.76□□□□□ -2.13
FXN-204ENST00000484259 COX6B2Q6YFQ2 88 aa1.76□□□□□ -2.13
FXN-204ENST00000484259 UBE2DNLQ8IWF7 75 aa1.76□□□□□ -2.13
FXN-204ENST00000484259 CRIPTQ9P021 101 aa1.76□□□□□ -2.13
FXN-204ENST00000484259 MGAM2Q2M2H8 2515 aa1.76□□□□□ -2.13
FXN-204ENST00000484259 NOTCH3Q9UM47 2321 aa1.75□□□□□ -2.13
FXN-204ENST00000484259 KRTAP10-5P60370 271 aa1.75□□□□□ -2.13
FXN-204ENST00000484259 KRTAP10-8P60410 259 aa1.75□□□□□ -2.13
FXN-204ENST00000484259 RPL37P61927 97 aaKnown RBP1.75□□□□□ -2.13
FXN-204ENST00000484259 PRB3Q04118 309 aaPredicted RBP1.75□□□□□ -2.13
FXN-204ENST00000484259 LEAP2Q969E1 77 aa1.75□□□□□ -2.13
FXN-204ENST00000484259 USMG5Q96IX5 58 aa1.75□□□□□ -2.13
FXN-204ENST00000484259 TP53AIP1Q9HCN2 124 aa1.75□□□□□ -2.13
FXN-204ENST00000484259 NBEAL1Q6ZS30 2694 aa1.74□□□□□ -2.13
FXN-204ENST00000484259 H3BUA1 57 aa1.74□□□□□ -2.13
FXN-204ENST00000484259 K7EQZ3 153 aa1.74□□□□□ -2.13
FXN-204ENST00000484259 RPL39P5Q59GN2 51 aa1.74□□□□□ -2.13
FXN-204ENST00000484259 UNQ6190/PRO20217Q6UXQ8 127 aa1.74□□□□□ -2.13
FXN-204ENST00000484259 SORL1Q92673 2214 aa1.74□□□□□ -2.13
FXN-204ENST00000484259 TNCP24821 2201 aa1.73□□□□□ -2.13
FXN-204ENST00000484259 ZNF469Q96JG9 3925 aaPredicted RBP1.73□□□□□ -2.13
FXN-204ENST00000484259 KRTAP10-3P60369 221 aa1.72□□□□□ -2.13
FXN-204ENST00000484259 TMEM167AQ8TBQ9 72 aa1.72□□□□□ -2.13
FXN-204ENST00000484259 MRPL34Q9BQ48 92 aaKnown RBP1.72□□□□□ -2.13
FXN-204ENST00000484259 AKAP9Q99996 3911 aa1.72□□□□□ -2.13
FXN-204ENST00000484259 NOTCH1P46531 2555 aa1.72□□□□□ -2.13
FXN-204ENST00000484259 TENM1Q9UKZ4 2725 aa1.71□□□□□ -2.14
FXN-204ENST00000484259 FBN1P35555 2871 aaKnown RBP1.71□□□□□ -2.14
FXN-204ENST00000484259 FBN3Q75N90 2809 aa1.71□□□□□ -2.14
FXN-204ENST00000484259 C6orf48Q9UBA6 75 aa1.71□□□□□ -2.14
FXN-204ENST00000484259 PRCDQ00LT1 54 aa1.7□□□□□ -2.14
FXN-204ENST00000484259 KLK9Q2XQG4 91 aa1.7□□□□□ -2.14
FXN-204ENST00000484259 APELAP0DMC3 54 aa1.69□□□□□ -2.14
FXN-204ENST00000484259 DEFB136Q30KP8 78 aa1.69□□□□□ -2.14
FXN-204ENST00000484259 VPS13CQ709C8 3753 aa1.69□□□□□ -2.14
FXN-204ENST00000484259 POLR2KP53803 58 aaKnown RBP1.68□□□□□ -2.14
FXN-204ENST00000484259 WT1-ASQ06250 92 aa1.68□□□□□ -2.14
FXN-204ENST00000484259 I3L2K1 104 aa1.67□□□□□ -2.14
FXN-204ENST00000484259 K7EIL1 84 aa1.67□□□□□ -2.14
FXN-204ENST00000484259 K7EIM0 57 aa1.67□□□□□ -2.14
FXN-204ENST00000484259 GAS8-AS1O95177 125 aa1.67□□□□□ -2.14
FXN-204ENST00000484259 PKD1L1Q8TDX9 2849 aa1.67□□□□□ -2.14
FXN-204ENST00000484259 ANK3Q12955 4377 aaKnown RBP1.67□□□□□ -2.14
FXN-204ENST00000484259 SVEP1Q4LDE5 3571 aa1.66□□□□□ -2.14
FXN-204ENST00000484259 H0YAA0 97 aa1.66□□□□□ -2.14
FXN-204ENST00000484259 PCOTHQ58A44 107 aa1.66□□□□□ -2.14
FXN-204ENST00000484259 SPINK9Q5DT21 86 aa1.66□□□□□ -2.14
FXN-204ENST00000484259 RHPN1-AS1Q9BWJ2 59 aa1.66□□□□□ -2.14
FXN-204ENST00000484259 VWFP04275 2813 aa1.66□□□□□ -2.14
FXN-204ENST00000484259 IGLV5-48A0A075B6I7 105 aa1.65□□□□□ -2.15
FXN-204ENST00000484259 TGP01266 2768 aa1.64□□□□□ -2.15
FXN-204ENST00000484259 RPL39P62891 51 aaKnown RBP1.64□□□□□ -2.15
FXN-204ENST00000484259 KRTAP13-4Q3LI77 160 aa1.64□□□□□ -2.15
FXN-204ENST00000484259 CUBNO60494 3623 aa1.64□□□□□ -2.15
FXN-204ENST00000484259 DEFB131AP59861 70 aa1.63□□□□□ -2.15
FXN-204ENST00000484259 KRTAP10-12P60413 245 aa1.63□□□□□ -2.15
FXN-204ENST00000484259 STAB2Q8WWQ8 2551 aa1.63□□□□□ -2.15
FXN-204ENST00000484259 MEGF8Q7Z7M0 2845 aa1.62□□□□□ -2.15
FXN-204ENST00000484259 A0A1B0GVY2 172 aa1.62□□□□□ -2.15
FXN-204ENST00000484259 DEFB135Q30KP9 77 aa1.62□□□□□ -2.15
FXN-204ENST00000484259 WFDC10BQ8IUB3 73 aa1.62□□□□□ -2.15
FXN-204ENST00000484259 WFDC13Q8IUB5 93 aa1.62□□□□□ -2.15
FXN-204ENST00000484259 RPL39LQ96EH5 51 aaKnown RBP1.62□□□□□ -2.15
FXN-204ENST00000484259 TENM3Q9P273 2699 aa1.62□□□□□ -2.15
FXN-204ENST00000484259 TRRAPQ9Y4A5 3859 aa1.61□□□□□ -2.15
FXN-204ENST00000484259 ANK2Q01484 3957 aa1.61□□□□□ -2.15
FXN-204ENST00000484259 DNHD1Q96M86 4753 aa1.61□□□□□ -2.15
FXN-204ENST00000484259 SPART-AS1P0CW21 52 aa1.61□□□□□ -2.15
FXN-204ENST00000484259 COX6A2Q02221 97 aa1.61□□□□□ -2.15
FXN-204ENST00000484259 A8MTW9 85 aa1.6□□□□□ -2.15
FXN-204ENST00000484259 Q6ZSA8 131 aa1.6□□□□□ -2.15
FXN-204ENST00000484259 HTN1P15515 57 aa1.59□□□□□ -2.15
FXN-204ENST00000484259 H1FX-AS1Q4G0G2 97 aa1.59□□□□□ -2.15
FXN-204ENST00000484259 NBEAL2Q6ZNJ1 2754 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms