RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 TYMSOSQ8TAI1 123 aa9.66□□□□□ -0.86
PCCB-217ENST00000484181 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
PCCB-217ENST00000484181 RPS28P62857 69 aaKnown RBP9.64□□□□□ -0.87
PCCB-217ENST00000484181 SPINK1P00995 79 aa9.61□□□□□ -0.87
PCCB-217ENST00000484181 MRPL34Q9BQ48 92 aaKnown RBP9.61□□□□□ -0.87
PCCB-217ENST00000484181 LRP1BQ9NZR2 4599 aa9.61□□□□□ -0.87
PCCB-217ENST00000484181 H0Y9P7 68 aa9.61□□□□□ -0.87
PCCB-217ENST00000484181 SMR3BP02814 79 aaPredicted RBP9.6□□□□□ -0.87
PCCB-217ENST00000484181 TRAV22A0A0B4J277 110 aa9.59□□□□□ -0.87
PCCB-217ENST00000484181 ZCCHC13Q8WW36 166 aaKnown RBP9.59□□□□□ -0.87
PCCB-217ENST00000484181 RYR2Q92736 4967 aa9.59□□□□□ -0.87
PCCB-217ENST00000484181 SPAG11AQ6PDA7 123 aa9.58□□□□□ -0.88
PCCB-217ENST00000484181 NDUFS5O43920 106 aa9.58□□□□□ -0.88
PCCB-217ENST00000484181 RPS29P62273 56 aaKnown RBP9.58□□□□□ -0.88
PCCB-217ENST00000484181 C1orf195Q5TG92 126 aa9.55□□□□□ -0.88
PCCB-217ENST00000484181 LINC00208Q96KT6 92 aa9.55□□□□□ -0.88
PCCB-217ENST00000484181 LINC00304Q8N9R0 145 aa9.55□□□□□ -0.88
PCCB-217ENST00000484181 SERP1Q9Y6X1 66 aa9.55□□□□□ -0.88
PCCB-217ENST00000484181 LINC00313P59037 77 aa9.51□□□□□ -0.89
PCCB-217ENST00000484181 PRR26Q8N8Z3 221 aa9.51□□□□□ -0.89
PCCB-217ENST00000484181 DYNC1H1Q14204 4646 aaKnown RBP9.51□□□□□ -0.89
PCCB-217ENST00000484181 FAM229AH3BQW9 127 aa9.51□□□□□ -0.89
PCCB-217ENST00000484181 C1orf64Q8NEQ6 169 aa9.51□□□□□ -0.89
PCCB-217ENST00000484181 PKHD1P08F94 4074 aa9.5□□□□□ -0.89
PCCB-217ENST00000484181 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
PCCB-217ENST00000484181 KRTAP10-4P60372 401 aaPredicted RBP9.49□□□□□ -0.89
PCCB-217ENST00000484181 NOTCH2NLQ7Z3S9 236 aa9.48□□□□□ -0.89
PCCB-217ENST00000484181 SPANXA2-OT1Q8N9U9 137 aa9.44□□□□□ -0.9
PCCB-217ENST00000484181 LOC101927531A0A1B0GV80 90 aa9.41□□□□□ -0.9
PCCB-217ENST00000484181 CYP4F30PQ9H0H9 118 aa9.4□□□□□ -0.9
PCCB-217ENST00000484181 APOBP04114 4563 aaKnown RBP9.4□□□□□ -0.9
PCCB-217ENST00000484181 KMT2CQ8NEZ4 4911 aaKnown RBP9.39□□□□□ -0.91
PCCB-217ENST00000484181 Q8N9P0 234 aaPredicted RBP9.39□□□□□ -0.91
PCCB-217ENST00000484181 OXTP01178 125 aa9.36□□□□□ -0.91
PCCB-217ENST00000484181 Q5VSD8 79 aa9.36□□□□□ -0.91
PCCB-217ENST00000484181 SMIM26A0A096LP01 95 aa9.34□□□□□ -0.91
PCCB-217ENST00000484181 KRTAP16-1A8MUX0 517 aa9.32□□□□□ -0.92
PCCB-217ENST00000484181 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
PCCB-217ENST00000484181 IGLV7-46A0A075B6I9 117 aa9.29□□□□□ -0.92
PCCB-217ENST00000484181 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
PCCB-217ENST00000484181 PRR4Q16378 134 aa9.29□□□□□ -0.92
PCCB-217ENST00000484181 Q5W150 140 aa9.29□□□□□ -0.92
PCCB-217ENST00000484181 FAT1Q14517 4588 aa9.22□□□□□ -0.93
PCCB-217ENST00000484181 IGKV2-30P06310 120 aa9.2□□□□□ -0.94
PCCB-217ENST00000484181 PKHD1L1Q86WI1 4243 aa9.19□□□□□ -0.94
PCCB-217ENST00000484181 KRTAP10-8P60410 259 aa9.18□□□□□ -0.94
PCCB-217ENST00000484181 RETNLBQ9BQ08 111 aa9.18□□□□□ -0.94
PCCB-217ENST00000484181 RYR3Q15413 4870 aa9.17□□□□□ -0.94
PCCB-217ENST00000484181 Q8N1X5 172 aa9.16□□□□□ -0.94
PCCB-217ENST00000484181 FP248Q71RG6 208 aaPredicted RBP9.16□□□□□ -0.94
PCCB-217ENST00000484181 COA5Q86WW8 74 aa9.13□□□□□ -0.95
PCCB-217ENST00000484181 C20orf166-AS1Q96NR2 134 aa9.13□□□□□ -0.95
PCCB-217ENST00000484181 C9orf92A6NGG3 77 aa9.12□□□□□ -0.95
PCCB-217ENST00000484181 V9GYY9 64 aa9.12□□□□□ -0.95
PCCB-217ENST00000484181 A8MUU9 505 aa9.11□□□□□ -0.95
PCCB-217ENST00000484181 RYR1P21817 5038 aa9.11□□□□□ -0.95
PCCB-217ENST00000484181 IGKV2D-30A0A075B6S6 120 aa9.1□□□□□ -0.95
PCCB-217ENST00000484181 HRES1P13985 223 aa9.1□□□□□ -0.95
PCCB-217ENST00000484181 C7orf65Q6ZTY9 151 aa9.1□□□□□ -0.95
PCCB-217ENST00000484181 MPLKIPQ8TAP9 179 aa9.09□□□□□ -0.95
PCCB-217ENST00000484181 HSPG2P98160 4391 aa9.08□□□□□ -0.96
PCCB-217ENST00000484181 ACYP2P14621 99 aa9.07□□□□□ -0.96
PCCB-217ENST00000484181 C4orf26Q17RF5 130 aa9.07□□□□□ -0.96
PCCB-217ENST00000484181 Q1T7F1 81 aa9.07□□□□□ -0.96
PCCB-217ENST00000484181 DMAC1Q96GE9 116 aa9.05□□□□□ -0.96
PCCB-217ENST00000484181 Q75L30 129 aa9.03□□□□□ -0.96
PCCB-217ENST00000484181 FLG2Q5D862 2391 aaPredicted RBP8.99□□□□□ -0.97
PCCB-217ENST00000484181 CHKB-CPT1BH3BT56 60 aa8.98□□□□□ -0.97
PCCB-217ENST00000484181 A8MUN3 132 aa8.94□□□□□ -0.98
PCCB-217ENST00000484181 MT1HL1P0DM35 61 aa8.94□□□□□ -0.98
PCCB-217ENST00000484181 KRTAP17-1Q9BYP8 105 aa8.94□□□□□ -0.98
PCCB-217ENST00000484181 ATP11AUNQ6ZP68 121 aa8.92□□□□□ -0.98
PCCB-217ENST00000484181 KIAA1109Q2LD37 5005 aa8.92□□□□□ -0.98
PCCB-217ENST00000484181 TNXBP22105 4242 aa8.92□□□□□ -0.98
PCCB-217ENST00000484181 RPL37P61927 97 aaKnown RBP8.87□□□□□ -0.99
PCCB-217ENST00000484181 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
PCCB-217ENST00000484181 PSPHP1O15172 72 aa8.86□□□□□ -0.99
PCCB-217ENST00000484181 SPINK7P58062 85 aa8.86□□□□□ -0.99
PCCB-217ENST00000484181 LRP1Q07954 4544 aaKnown RBP8.86□□□□□ -0.99
PCCB-217ENST00000484181 LINC01558Q9Y6Z2 57 aa8.85□□□□□ -0.99
PCCB-217ENST00000484181 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
PCCB-217ENST00000484181 EPPK1P58107 5090 aaKnown RBP8.84□□□□□ -0.99
PCCB-217ENST00000484181 XP32Q5T750 250 aa8.83□□□□□ -1
PCCB-217ENST00000484181 SPTSSBQ8NFR3 76 aa8.78□□□□□ -1
PCCB-217ENST00000484181 TPRXLQ17RH7 258 aa8.78□□□□□ -1
PCCB-217ENST00000484181 Q5VV11 94 aa8.77□□□□□ -1.01
PCCB-217ENST00000484181 BRK1Q8WUW1 75 aa8.76□□□□□ -1.01
PCCB-217ENST00000484181 DMBT1Q9UGM3 2413 aaPredicted RBP8.73□□□□□ -1.01
PCCB-217ENST00000484181 PRO0628Q9UI54 55 aa8.72□□□□□ -1.01
PCCB-217ENST00000484181 COX6B2Q6YFQ2 88 aa8.71□□□□□ -1.02
PCCB-217ENST00000484181 KRTAP4-5Q9BYR2 181 aa8.7□□□□□ -1.02
PCCB-217ENST00000484181 J3QL48 77 aa8.69□□□□□ -1.02
PCCB-217ENST00000484181 A0A1B0GU69 56 aa8.68□□□□□ -1.02
PCCB-217ENST00000484181 MYCBP2O75592 4640 aa8.67□□□□□ -1.02
PCCB-217ENST00000484181 A6NED7 52 aa8.65□□□□□ -1.02
PCCB-217ENST00000484181 SEC61GP60059 68 aa8.61□□□□□ -1.03
PCCB-217ENST00000484181 KRTAP3-1Q9BYR8 98 aa8.61□□□□□ -1.03
PCCB-217ENST00000484181 CDC42SE1Q9NRR8 79 aa8.54□□□□□ -1.04
PCCB-217ENST00000484181 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
PCCB-217ENST00000484181 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 342.8 ms