RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 KRTAP1-4P0C5Y4 121 aa6.98□□□□□ -1.29
SND1-210ENST00000483503 FAM236CP0DP71 79 aa6.98□□□□□ -1.29
SND1-210ENST00000483503 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
SND1-210ENST00000483503 LIMD2Q9BT23 127 aa6.98□□□□□ -1.29
SND1-210ENST00000483503 SACSQ9NZJ4 4579 aa6.98□□□□□ -1.29
SND1-210ENST00000483503 PLA2G1BP04054 148 aaKnown RBP6.97□□□□□ -1.29
SND1-210ENST00000483503 C4orf48Q5BLP8 95 aa6.97□□□□□ -1.29
SND1-210ENST00000483503 TP53AIP1Q9HCN2 124 aa6.97□□□□□ -1.29
SND1-210ENST00000483503 IGHV6-1A0A0B4J1U7 121 aa6.96□□□□□ -1.3
SND1-210ENST00000483503 UBR4Q5T4S7 5183 aa6.96□□□□□ -1.3
SND1-210ENST00000483503 C8orf87E5RJ46 101 aa6.95□□□□□ -1.3
SND1-210ENST00000483503 TYMSOSQ8TAI1 123 aa6.95□□□□□ -1.3
SND1-210ENST00000483503 ZCCHC13Q8WW36 166 aaKnown RBP6.93□□□□□ -1.3
SND1-210ENST00000483503 H0Y9P7 68 aa6.92□□□□□ -1.3
SND1-210ENST00000483503 SPINK1P00995 79 aa6.92□□□□□ -1.3
SND1-210ENST00000483503 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
SND1-210ENST00000483503 SPAG11AQ6PDA7 123 aa6.91□□□□□ -1.3
SND1-210ENST00000483503 LRP1BQ9NZR2 4599 aa6.91□□□□□ -1.3
SND1-210ENST00000483503 TRAV22A0A0B4J277 110 aa6.9□□□□□ -1.3
SND1-210ENST00000483503 SERP1Q9Y6X1 66 aa6.9□□□□□ -1.3
SND1-210ENST00000483503 SMR3BP02814 79 aaPredicted RBP6.89□□□□□ -1.31
SND1-210ENST00000483503 RPS29P62273 56 aaKnown RBP6.89□□□□□ -1.31
SND1-210ENST00000483503 C1orf195Q5TG92 126 aa6.89□□□□□ -1.31
SND1-210ENST00000483503 NDUFS5O43920 106 aa6.88□□□□□ -1.31
SND1-210ENST00000483503 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
SND1-210ENST00000483503 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
SND1-210ENST00000483503 DYNC1H1Q14204 4646 aaKnown RBP6.87□□□□□ -1.31
SND1-210ENST00000483503 LINC00313P59037 77 aa6.86□□□□□ -1.31
SND1-210ENST00000483503 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
SND1-210ENST00000483503 C1orf64Q8NEQ6 169 aa6.85□□□□□ -1.31
SND1-210ENST00000483503 PRR26Q8N8Z3 221 aa6.84□□□□□ -1.31
SND1-210ENST00000483503 VPS13BQ7Z7G8 4022 aa6.84□□□□□ -1.31
SND1-210ENST00000483503 FAM229AH3BQW9 127 aa6.83□□□□□ -1.32
SND1-210ENST00000483503 KRTAP10-4P60372 401 aaPredicted RBP6.83□□□□□ -1.32
SND1-210ENST00000483503 NOTCH2NLQ7Z3S9 236 aa6.83□□□□□ -1.32
SND1-210ENST00000483503 SPANXA2-OT1Q8N9U9 137 aa6.81□□□□□ -1.32
SND1-210ENST00000483503 CYP4F30PQ9H0H9 118 aa6.79□□□□□ -1.32
SND1-210ENST00000483503 PKHD1P08F94 4074 aa6.79□□□□□ -1.32
SND1-210ENST00000483503 LOC101927531A0A1B0GV80 90 aa6.77□□□□□ -1.33
SND1-210ENST00000483503 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
SND1-210ENST00000483503 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
SND1-210ENST00000483503 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
SND1-210ENST00000483503 APOBP04114 4563 aaKnown RBP6.75□□□□□ -1.33
SND1-210ENST00000483503 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
SND1-210ENST00000483503 OXTP01178 125 aa6.75□□□□□ -1.33
SND1-210ENST00000483503 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
SND1-210ENST00000483503 IGLV7-46A0A075B6I9 117 aa6.71□□□□□ -1.34
SND1-210ENST00000483503 KRTAP13-3Q3SY46 172 aa6.71□□□□□ -1.34
SND1-210ENST00000483503 Q5VSD8 79 aa6.7□□□□□ -1.34
SND1-210ENST00000483503 ABCA13Q86UQ4 5058 aa6.69□□□□□ -1.34
SND1-210ENST00000483503 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
SND1-210ENST00000483503 PCOTHQ58A44 107 aa6.68□□□□□ -1.34
SND1-210ENST00000483503 Q5W150 140 aa6.68□□□□□ -1.34
SND1-210ENST00000483503 PKHD1L1Q86WI1 4243 aa6.68□□□□□ -1.34
SND1-210ENST00000483503 PRR4Q16378 134 aa6.67□□□□□ -1.34
SND1-210ENST00000483503 HERC1Q15751 4861 aa6.66□□□□□ -1.34
SND1-210ENST00000483503 IGKV2-30P06310 120 aa6.63□□□□□ -1.35
SND1-210ENST00000483503 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
SND1-210ENST00000483503 FAT1Q14517 4588 aa6.63□□□□□ -1.35
SND1-210ENST00000483503 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
SND1-210ENST00000483503 RETNLBQ9BQ08 111 aa6.6□□□□□ -1.35
SND1-210ENST00000483503 Q8N1X5 172 aa6.59□□□□□ -1.35
SND1-210ENST00000483503 V9GYY9 64 aa6.58□□□□□ -1.36
SND1-210ENST00000483503 A8MUU9 505 aa6.57□□□□□ -1.36
SND1-210ENST00000483503 COA5Q86WW8 74 aa6.57□□□□□ -1.36
SND1-210ENST00000483503 C20orf166-AS1Q96NR2 134 aa6.57□□□□□ -1.36
SND1-210ENST00000483503 HRES1P13985 223 aa6.55□□□□□ -1.36
SND1-210ENST00000483503 ACYP2P14621 99 aa6.55□□□□□ -1.36
SND1-210ENST00000483503 C4orf26Q17RF5 130 aa6.55□□□□□ -1.36
SND1-210ENST00000483503 Q1T7F1 81 aa6.55□□□□□ -1.36
SND1-210ENST00000483503 IGKV2D-30A0A075B6S6 120 aa6.54□□□□□ -1.36
SND1-210ENST00000483503 C9orf92A6NGG3 77 aa6.54□□□□□ -1.36
SND1-210ENST00000483503 C7orf65Q6ZTY9 151 aa6.54□□□□□ -1.36
SND1-210ENST00000483503 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
SND1-210ENST00000483503 MPLKIPQ8TAP9 179 aa6.53□□□□□ -1.36
SND1-210ENST00000483503 HSPG2P98160 4391 aa6.53□□□□□ -1.36
SND1-210ENST00000483503 FLG2Q5D862 2391 aaPredicted RBP6.53□□□□□ -1.36
SND1-210ENST00000483503 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
SND1-210ENST00000483503 Q75L30 129 aa6.5□□□□□ -1.37
SND1-210ENST00000483503 CHKB-CPT1BH3BT56 60 aa6.45□□□□□ -1.38
SND1-210ENST00000483503 A8MUN3 132 aa6.44□□□□□ -1.38
SND1-210ENST00000483503 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
SND1-210ENST00000483503 TNXBP22105 4242 aa6.43□□□□□ -1.38
SND1-210ENST00000483503 ATP11AUNQ6ZP68 121 aa6.41□□□□□ -1.38
SND1-210ENST00000483503 LINC01558Q9Y6Z2 57 aa6.4□□□□□ -1.38
SND1-210ENST00000483503 DMBT1Q9UGM3 2413 aaPredicted RBP6.39□□□□□ -1.39
SND1-210ENST00000483503 FAT3Q8TDW7 4589 aa6.39□□□□□ -1.39
SND1-210ENST00000483503 KRTAP9-6A0A140TA67 174 aa6.39□□□□□ -1.39
SND1-210ENST00000483503 J3QL48 77 aa6.39□□□□□ -1.39
SND1-210ENST00000483503 RPL37P61927 97 aaKnown RBP6.38□□□□□ -1.39
SND1-210ENST00000483503 PSPHP1O15172 72 aa6.37□□□□□ -1.39
SND1-210ENST00000483503 SPINK7P58062 85 aa6.37□□□□□ -1.39
SND1-210ENST00000483503 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
SND1-210ENST00000483503 LRP1Q07954 4544 aaKnown RBP6.35□□□□□ -1.39
SND1-210ENST00000483503 XP32Q5T750 250 aa6.34□□□□□ -1.39
SND1-210ENST00000483503 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
SND1-210ENST00000483503 Q5VV11 94 aa6.33□□□□□ -1.4
SND1-210ENST00000483503 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
SND1-210ENST00000483503 PRO0628Q9UI54 55 aa6.3□□□□□ -1.4
SND1-210ENST00000483503 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms