RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 LINC00313P59037 77 aa7.08□□□□□ -1.28
SSR1-208ENST00000483409 C21orf62-AS1Q17RA5 79 aa7.08□□□□□ -1.28
SSR1-208ENST00000483409 ATP11AUNQ6ZP68 121 aa7.08□□□□□ -1.28
SSR1-208ENST00000483409 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
SSR1-208ENST00000483409 IGHV6-1A0A0B4J1U7 121 aa7.07□□□□□ -1.28
SSR1-208ENST00000483409 A8MUU9 505 aa7.07□□□□□ -1.28
SSR1-208ENST00000483409 NOTCH2NLQ7Z3S9 236 aa7.07□□□□□ -1.28
SSR1-208ENST00000483409 A0A1B0GVX0 72 aa7.04□□□□□ -1.28
SSR1-208ENST00000483409 A0A1B0GW54 56 aa7.04□□□□□ -1.28
SSR1-208ENST00000483409 KRTAP16-1A8MUX0 517 aa7.04□□□□□ -1.28
SSR1-208ENST00000483409 J3KT08 172 aa7.03□□□□□ -1.28
SSR1-208ENST00000483409 KRTAP19-2Q3LHN2 52 aa7.03□□□□□ -1.28
SSR1-208ENST00000483409 C8orf87E5RJ46 101 aa7.01□□□□□ -1.29
SSR1-208ENST00000483409 SMCPP49901 116 aaPredicted RBP7.01□□□□□ -1.29
SSR1-208ENST00000483409 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
SSR1-208ENST00000483409 K7EP34 96 aa7□□□□□ -1.29
SSR1-208ENST00000483409 NDUFB1O75438 58 aa6.98□□□□□ -1.29
SSR1-208ENST00000483409 NREPQ16612 68 aa6.98□□□□□ -1.29
SSR1-208ENST00000483409 A8MWP4 228 aa6.97□□□□□ -1.29
SSR1-208ENST00000483409 PRO0461Q9UI25 63 aa6.97□□□□□ -1.29
SSR1-208ENST00000483409 IGKV3D-7A0A0C4DH55 119 aa6.95□□□□□ -1.3
SSR1-208ENST00000483409 COX6B2Q6YFQ2 88 aa6.95□□□□□ -1.3
SSR1-208ENST00000483409 GTF2H5Q6ZYL4 71 aa6.93□□□□□ -1.3
SSR1-208ENST00000483409 C8orf17Q9NRJ1 99 aa6.93□□□□□ -1.3
SSR1-208ENST00000483409 MT1HP80294 61 aa6.92□□□□□ -1.3
SSR1-208ENST00000483409 PRR15Q8IV56 129 aa6.91□□□□□ -1.3
SSR1-208ENST00000483409 Q6ZVQ6 151 aa6.89□□□□□ -1.31
SSR1-208ENST00000483409 K7EQZ3 153 aa6.88□□□□□ -1.31
SSR1-208ENST00000483409 BPY2O14599 106 aa6.88□□□□□ -1.31
SSR1-208ENST00000483409 FLGP20930 4061 aaPredicted RBP6.88□□□□□ -1.31
SSR1-208ENST00000483409 Q8N9P0 234 aaPredicted RBP6.87□□□□□ -1.31
SSR1-208ENST00000483409 MMP24-AS1A0A0U1RRL7 71 aa6.86□□□□□ -1.31
SSR1-208ENST00000483409 ZCCHC13Q8WW36 166 aaKnown RBP6.86□□□□□ -1.31
SSR1-208ENST00000483409 F8W1H4 67 aa6.85□□□□□ -1.31
SSR1-208ENST00000483409 ETDBQ3ZM63 59 aa6.84□□□□□ -1.31
SSR1-208ENST00000483409 LINC00846Q9NV44 126 aa6.84□□□□□ -1.31
SSR1-208ENST00000483409 M0R2T5 61 aa6.83□□□□□ -1.32
SSR1-208ENST00000483409 Q8N9L7 120 aa6.83□□□□□ -1.32
SSR1-208ENST00000483409 TMEM254Q8TBM7 123 aa6.82□□□□□ -1.32
SSR1-208ENST00000483409 MRPL34Q9BQ48 92 aaKnown RBP6.82□□□□□ -1.32
SSR1-208ENST00000483409 UBL5Q9BZL1 73 aa6.82□□□□□ -1.32
SSR1-208ENST00000483409 hDV103S1A0JD37 113 aa6.81□□□□□ -1.32
SSR1-208ENST00000483409 HRES1P13985 223 aa6.8□□□□□ -1.32
SSR1-208ENST00000483409 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
SSR1-208ENST00000483409 FAM236DA0A1B0GTK5 79 aa6.78□□□□□ -1.32
SSR1-208ENST00000483409 NDUFS5O43920 106 aa6.78□□□□□ -1.32
SSR1-208ENST00000483409 FAM236CP0DP71 79 aa6.78□□□□□ -1.32
SSR1-208ENST00000483409 WFDC13Q8IUB5 93 aa6.78□□□□□ -1.32
SSR1-208ENST00000483409 SPINK7P58062 85 aa6.77□□□□□ -1.33
SSR1-208ENST00000483409 KRTAP10-6P60371 365 aaPredicted RBP6.77□□□□□ -1.33
SSR1-208ENST00000483409 MPLKIPQ8TAP9 179 aa6.76□□□□□ -1.33
SSR1-208ENST00000483409 RBM12B-AS1Q9P1G2 102 aa6.76□□□□□ -1.33
SSR1-208ENST00000483409 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
SSR1-208ENST00000483409 CASC2Q6XLA1 102 aa6.74□□□□□ -1.33
SSR1-208ENST00000483409 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
SSR1-208ENST00000483409 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
SSR1-208ENST00000483409 KRTAP4-6Q9BYQ5 205 aa6.7□□□□□ -1.34
SSR1-208ENST00000483409 A0A1B0GV90 55 aa6.69□□□□□ -1.34
SSR1-208ENST00000483409 CXCL6P80162 114 aa6.68□□□□□ -1.34
SSR1-208ENST00000483409 Q5W150 140 aa6.68□□□□□ -1.34
SSR1-208ENST00000483409 IGKV2D-30A0A075B6S6 120 aa6.65□□□□□ -1.34
SSR1-208ENST00000483409 IGKV2-30P06310 120 aa6.65□□□□□ -1.34
SSR1-208ENST00000483409 ACYP1P07311 99 aa6.64□□□□□ -1.35
SSR1-208ENST00000483409 FAM240AA0A1B0GVK7 77 aa6.62□□□□□ -1.35
SSR1-208ENST00000483409 C7orf65Q6ZTY9 151 aa6.62□□□□□ -1.35
SSR1-208ENST00000483409 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
SSR1-208ENST00000483409 ATP5EP2Q5VTU8 51 aa6.56□□□□□ -1.36
SSR1-208ENST00000483409 TP53AIP1Q9HCN2 124 aa6.54□□□□□ -1.36
SSR1-208ENST00000483409 HIST1H4AP62805 103 aaKnown RBP6.53□□□□□ -1.36
SSR1-208ENST00000483409 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
SSR1-208ENST00000483409 H1FX-AS1Q4G0G2 97 aa6.51□□□□□ -1.37
SSR1-208ENST00000483409 MT2AP02795 61 aa6.5□□□□□ -1.37
SSR1-208ENST00000483409 C4orf26Q17RF5 130 aa6.5□□□□□ -1.37
SSR1-208ENST00000483409 LINC00643Q86TS7 51 aa6.5□□□□□ -1.37
SSR1-208ENST00000483409 A0A087WVE0 104 aa6.46□□□□□ -1.38
SSR1-208ENST00000483409 MT1FP04733 61 aa6.46□□□□□ -1.38
SSR1-208ENST00000483409 TRAV22A0A0B4J277 110 aa6.44□□□□□ -1.38
SSR1-208ENST00000483409 CRCT1Q9UGL9 99 aa6.44□□□□□ -1.38
SSR1-208ENST00000483409 J3QR89 54 aa6.43□□□□□ -1.38
SSR1-208ENST00000483409 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
SSR1-208ENST00000483409 UQCRQO14949 82 aa6.4□□□□□ -1.38
SSR1-208ENST00000483409 C1orf64Q8NEQ6 169 aa6.4□□□□□ -1.38
SSR1-208ENST00000483409 CYP4F30PQ9H0H9 118 aa6.4□□□□□ -1.38
SSR1-208ENST00000483409 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
SSR1-208ENST00000483409 H0Y9P7 68 aa6.38□□□□□ -1.39
SSR1-208ENST00000483409 FSIP2Q5CZC0 6907 aa6.37□□□□□ -1.39
SSR1-208ENST00000483409 LOC101927531A0A1B0GV80 90 aa6.37□□□□□ -1.39
SSR1-208ENST00000483409 KRTAP9-3Q9BYQ3 159 aa6.36□□□□□ -1.39
SSR1-208ENST00000483409 ATOX1O00244 68 aa6.34□□□□□ -1.39
SSR1-208ENST00000483409 S4R3F8 94 aa6.34□□□□□ -1.39
SSR1-208ENST00000483409 C5orf47Q569G3 176 aa6.32□□□□□ -1.4
SSR1-208ENST00000483409 OCR1Q9BZK8 76 aa6.31□□□□□ -1.4
SSR1-208ENST00000483409 LCA10Q71F78 164 aa6.29□□□□□ -1.4
SSR1-208ENST00000483409 USH2AO75445 5202 aa6.28□□□□□ -1.4
SSR1-208ENST00000483409 LINC00208Q96KT6 92 aa6.28□□□□□ -1.4
SSR1-208ENST00000483409 K7ERU9 68 aa6.26□□□□□ -1.41
SSR1-208ENST00000483409 MP68P56378 58 aa6.26□□□□□ -1.41
SSR1-208ENST00000483409 SCGB1A1P11684 91 aa6.25□□□□□ -1.41
SSR1-208ENST00000483409 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
SSR1-208ENST00000483409 KLKP1Q107X0 134 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms