RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PKDREJQ9NTG1 2253 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 ABCA13Q86UQ4 5058 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 TEX15Q9BXT5 2789 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 CHD9Q3L8U1 2897 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 NCOR1O75376 2440 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 SPG11Q96JI7 2443 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 CEP250Q9BV73 2442 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 CEP290O15078 2479 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 MAP1BP46821 2468 aaKnown RBP0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 SPTAN1Q13813 2472 aaKnown RBP0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 NOTCH1P46531 2555 aa0.53□□□□□ -2.32
LAPTM4A-202ENST00000483117 DNAH14Q0VDD8 3507 aa0.53□□□□□ -2.32
LAPTM4A-202ENST00000483117 CSMD1Q96PZ7 3565 aa0.53□□□□□ -2.32
LAPTM4A-202ENST00000483117 HTTP42858 3142 aa0.53□□□□□ -2.32
LAPTM4A-202ENST00000483117 GPR98Q8WXG9 6306 aa0.53□□□□□ -2.32
LAPTM4A-202ENST00000483117 H0YGG7 62 aa0.53□□□□□ -2.32
LAPTM4A-202ENST00000483117 M0R2T5 61 aa0.53□□□□□ -2.32
LAPTM4A-202ENST00000483117 COL6A5A8TX70 2615 aa0.53□□□□□ -2.32
LAPTM4A-202ENST00000483117 WNK2Q9Y3S1 2297 aa0.53□□□□□ -2.33
LAPTM4A-202ENST00000483117 BOD1L1Q8NFC6 3051 aa0.53□□□□□ -2.33
LAPTM4A-202ENST00000483117 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.33
LAPTM4A-202ENST00000483117 CCDC168Q8NDH2 2452 aa0.53□□□□□ -2.33
LAPTM4A-202ENST00000483117 FAM208AQ9UK61 1670 aaKnown RBP0.53□□□□□ -2.33
LAPTM4A-202ENST00000483117 XIRP2A4UGR9 3374 aa0.53□□□□□ -2.33
LAPTM4A-202ENST00000483117 NBEAL1Q6ZS30 2694 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 TENM4Q6N022 2769 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 VWFP04275 2813 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 ANK2Q01484 3957 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 LRRK2Q5S007 2527 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 ANKHD1Q8IWZ3 2542 aaKnown RBP0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 DEFB135Q30KP9 77 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 ZNF469Q96JG9 3925 aaPredicted RBP0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 IGSF10Q6WRI0 2623 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 PCNX1Q96RV3 2341 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 SPTA1P02549 2419 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 GVINP1Q7Z2Y8 2422 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 HERC1Q15751 4861 aa0.52□□□□□ -2.33
LAPTM4A-202ENST00000483117 FLNAP21333 2647 aaKnown RBP0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 CDH23Q9H251 3354 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 PRLHP81277 87 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 AKAP6Q13023 2319 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 ATRQ13535 2644 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 FLNCQ14315 2725 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 LMO7Q8WWI1 1683 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 TLN1Q9Y490 2541 aaKnown RBP0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 DMDP11532 3685 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 FRYQ5TBA9 3013 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 ZZEF1O43149 2961 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 STAB1Q9NY15 2570 aa0.51□□□□□ -2.33
LAPTM4A-202ENST00000483117 LOC400499M0QZD8 3231 aa0.5□□□□□ -2.33
LAPTM4A-202ENST00000483117 NF1P21359 2839 aa0.5□□□□□ -2.33
LAPTM4A-202ENST00000483117 TIMM8BQ9Y5J9 83 aaPredicted RBP0.5□□□□□ -2.33
LAPTM4A-202ENST00000483117 RIF1Q5UIP0 2472 aaKnown RBP0.5□□□□□ -2.33
LAPTM4A-202ENST00000483117 CREBBPQ92793 2442 aa0.5□□□□□ -2.33
LAPTM4A-202ENST00000483117 FAT4Q6V0I7 4981 aa0.5□□□□□ -2.33
LAPTM4A-202ENST00000483117 WDFY3Q8IZQ1 3526 aa0.49□□□□□ -2.33
LAPTM4A-202ENST00000483117 DEFB106AQ8N104 65 aa0.49□□□□□ -2.33
LAPTM4A-202ENST00000483117 S4R3F8 94 aa0.49□□□□□ -2.33
LAPTM4A-202ENST00000483117 MYO15AQ9UKN7 3530 aa0.49□□□□□ -2.33
LAPTM4A-202ENST00000483117 PDZD2O15018 2839 aa0.49□□□□□ -2.33
LAPTM4A-202ENST00000483117 IQGAP1P46940 1657 aa0.49□□□□□ -2.33
LAPTM4A-202ENST00000483117 ITPR1Q14643 2758 aa0.49□□□□□ -2.33
LAPTM4A-202ENST00000483117 DNAH1Q9P2D7 4330 aa0.49□□□□□ -2.33
LAPTM4A-202ENST00000483117 VPS13AQ96RL7 3174 aa0.49□□□□□ -2.33
LAPTM4A-202ENST00000483117 MROH2BQ7Z745 1585 aa0.49□□□□□ -2.33
LAPTM4A-202ENST00000483117 SACSQ9NZJ4 4579 aa0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 IGF2RP11717 2491 aa0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 DYNC2H1Q8NCM8 4307 aaKnown RBP0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 FAM186AA6NE01 2351 aa0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 SPENQ96T58 3664 aaKnown RBP0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 AKAP9Q99996 3911 aa0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 SMIM2Q9BVW6 85 aa0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 NOP10Q9NPE3 64 aaKnown RBP0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 MTORP42345 2549 aa0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 APCP25054 2843 aa0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 ATP7AQ04656 1500 aa0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 DMXL1Q9Y485 3027 aa0.48□□□□□ -2.33
LAPTM4A-202ENST00000483117 ZANQ9Y493 2812 aa0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 CEP295Q9C0D2 2601 aa0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 PRKDCP78527 4128 aaKnown RBP0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 TRIOO75962 3097 aa0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 TRPM2O94759 1503 aa0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 FAT3Q8TDW7 4589 aa0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 NEBP20929 6669 aa0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 HIVEP3Q5T1R4 2406 aa0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 CELSR1Q9NYQ6 3014 aa0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 ALMS1Q8TCU4 4167 aa0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 WDR87Q6ZQQ6 2873 aa0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 DDX60Q8IY21 1712 aaKnown RBP0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 USP9YO00507 2555 aaPredicted RBP0.47□□□□□ -2.33
LAPTM4A-202ENST00000483117 TLN2Q9Y4G6 2542 aa0.46□□□□□ -2.34
LAPTM4A-202ENST00000483117 COL12A1Q99715 3063 aa0.46□□□□□ -2.34
LAPTM4A-202ENST00000483117 FRYLO94915 3013 aa0.46□□□□□ -2.34
LAPTM4A-202ENST00000483117 EP300Q09472 2414 aaPredicted RBP0.46□□□□□ -2.34
LAPTM4A-202ENST00000483117 NBEAQ8NFP9 2946 aa0.46□□□□□ -2.34
LAPTM4A-202ENST00000483117 FREM2Q5SZK8 3169 aa0.46□□□□□ -2.34
LAPTM4A-202ENST00000483117 LAMA5O15230 3695 aa0.46□□□□□ -2.34
LAPTM4A-202ENST00000483117 UTP20O75691 2785 aaKnown RBP0.46□□□□□ -2.34
LAPTM4A-202ENST00000483117 RNF213Q63HN8 5207 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms