RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 A0A1W2PPM0 123 aa5.74□□□□□ -1.49
SSBP1-210ENST00000481508 MTURNQ8N3F0 131 aa5.73□□□□□ -1.49
SSBP1-210ENST00000481508 C9JAW5 83 aa5.72□□□□□ -1.49
SSBP1-210ENST00000481508 CCKP06307 115 aa5.72□□□□□ -1.49
SSBP1-210ENST00000481508 TRBV20-1A0A075B6N2 111 aa5.71□□□□□ -1.5
SSBP1-210ENST00000481508 PCP4L1A6NKN8 68 aa5.71□□□□□ -1.5
SSBP1-210ENST00000481508 RBM3P98179 157 aaKnown RBP5.71□□□□□ -1.5
SSBP1-210ENST00000481508 LYRM7Q5U5X0 104 aa5.71□□□□□ -1.5
SSBP1-210ENST00000481508 SS18L2Q9UHA2 77 aa5.71□□□□□ -1.5
SSBP1-210ENST00000481508 VPS25Q9BRG1 176 aa5.7□□□□□ -1.5
SSBP1-210ENST00000481508 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
SSBP1-210ENST00000481508 DEFB116Q30KQ4 102 aa5.68□□□□□ -1.5
SSBP1-210ENST00000481508 PCOTHQ58A44 107 aa5.68□□□□□ -1.5
SSBP1-210ENST00000481508 COL5A1-AS1Q5SY13 56 aa5.68□□□□□ -1.5
SSBP1-210ENST00000481508 Q6ZQT0 140 aa5.68□□□□□ -1.5
SSBP1-210ENST00000481508 OBSCN-AS1Q96MR7 158 aa5.68□□□□□ -1.5
SSBP1-210ENST00000481508 DSCR8Q96T75 97 aa5.68□□□□□ -1.5
SSBP1-210ENST00000481508 C14orf132Q9NPU4 83 aa5.68□□□□□ -1.5
SSBP1-210ENST00000481508 LINC00472Q9H8W2 130 aa5.67□□□□□ -1.5
SSBP1-210ENST00000481508 SPCS1Q9Y6A9 102 aa5.67□□□□□ -1.5
SSBP1-210ENST00000481508 LOC110117498A0A087WWA1 95 aa5.66□□□□□ -1.5
SSBP1-210ENST00000481508 RPL37P61927 97 aaKnown RBP5.66□□□□□ -1.5
SSBP1-210ENST00000481508 JMJD7-PLA2G4BH0Y9G9 81 aa5.65□□□□□ -1.5
SSBP1-210ENST00000481508 H3BT86 120 aa5.65□□□□□ -1.5
SSBP1-210ENST00000481508 IGKV4-1P06312 121 aa5.65□□□□□ -1.5
SSBP1-210ENST00000481508 SIGMAR1Q99720 223 aa5.65□□□□□ -1.5
SSBP1-210ENST00000481508 DSCR10P59022 87 aa5.64□□□□□ -1.51
SSBP1-210ENST00000481508 NOTCH2NLQ7Z3S9 236 aa5.63□□□□□ -1.51
SSBP1-210ENST00000481508 PRO0461Q9UI25 63 aa5.63□□□□□ -1.51
SSBP1-210ENST00000481508 K7EP34 96 aa5.61□□□□□ -1.51
SSBP1-210ENST00000481508 KRTAP16-1A8MUX0 517 aa5.6□□□□□ -1.51
SSBP1-210ENST00000481508 Q75L30 129 aa5.59□□□□□ -1.51
SSBP1-210ENST00000481508 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
SSBP1-210ENST00000481508 A8MUU9 505 aa5.58□□□□□ -1.52
SSBP1-210ENST00000481508 KRTAP19-2Q3LHN2 52 aa5.58□□□□□ -1.52
SSBP1-210ENST00000481508 C20orf166-AS1Q96NR2 134 aa5.58□□□□□ -1.52
SSBP1-210ENST00000481508 IGHV6-1A0A0B4J1U7 121 aa5.57□□□□□ -1.52
SSBP1-210ENST00000481508 PDE6GP18545 87 aa5.57□□□□□ -1.52
SSBP1-210ENST00000481508 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
SSBP1-210ENST00000481508 LINC00313P59037 77 aa5.56□□□□□ -1.52
SSBP1-210ENST00000481508 C21orf62-AS1Q17RA5 79 aa5.55□□□□□ -1.52
SSBP1-210ENST00000481508 A0A1B0GW54 56 aa5.54□□□□□ -1.52
SSBP1-210ENST00000481508 IGKV3D-7A0A0C4DH55 119 aa5.52□□□□□ -1.53
SSBP1-210ENST00000481508 J3KT08 172 aa5.52□□□□□ -1.53
SSBP1-210ENST00000481508 ATP11AUNQ6ZP68 121 aa5.52□□□□□ -1.53
SSBP1-210ENST00000481508 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
SSBP1-210ENST00000481508 A8MWP4 228 aa5.51□□□□□ -1.53
SSBP1-210ENST00000481508 C8orf87E5RJ46 101 aa5.51□□□□□ -1.53
SSBP1-210ENST00000481508 NREPQ16612 68 aa5.51□□□□□ -1.53
SSBP1-210ENST00000481508 GTF2H5Q6ZYL4 71 aa5.51□□□□□ -1.53
SSBP1-210ENST00000481508 C8orf17Q9NRJ1 99 aa5.49□□□□□ -1.53
SSBP1-210ENST00000481508 Q6ZVQ6 151 aa5.48□□□□□ -1.53
SSBP1-210ENST00000481508 K7EQZ3 153 aa5.47□□□□□ -1.53
SSBP1-210ENST00000481508 ETDBQ3ZM63 59 aa5.47□□□□□ -1.53
SSBP1-210ENST00000481508 PRR15Q8IV56 129 aa5.47□□□□□ -1.53
SSBP1-210ENST00000481508 LINC00846Q9NV44 126 aa5.47□□□□□ -1.53
SSBP1-210ENST00000481508 USH2AO75445 5202 aa5.47□□□□□ -1.53
SSBP1-210ENST00000481508 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
SSBP1-210ENST00000481508 MMP24-AS1A0A0U1RRL7 71 aa5.46□□□□□ -1.54
SSBP1-210ENST00000481508 F8W1H4 67 aa5.46□□□□□ -1.54
SSBP1-210ENST00000481508 NDUFB1O75438 58 aa5.46□□□□□ -1.54
SSBP1-210ENST00000481508 MT1HP80294 61 aa5.45□□□□□ -1.54
SSBP1-210ENST00000481508 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-210ENST00000481508 FLGP20930 4061 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-210ENST00000481508 Q8N9L7 120 aa5.44□□□□□ -1.54
SSBP1-210ENST00000481508 Q8N9P0 234 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-210ENST00000481508 BPY2O14599 106 aa5.43□□□□□ -1.54
SSBP1-210ENST00000481508 A0A1B0GV90 55 aa5.42□□□□□ -1.54
SSBP1-210ENST00000481508 ZCCHC13Q8WW36 166 aaKnown RBP5.41□□□□□ -1.54
SSBP1-210ENST00000481508 HRES1P13985 223 aa5.39□□□□□ -1.55
SSBP1-210ENST00000481508 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-210ENST00000481508 TMEM254Q8TBM7 123 aa5.39□□□□□ -1.55
SSBP1-210ENST00000481508 COX6B2Q6YFQ2 88 aa5.38□□□□□ -1.55
SSBP1-210ENST00000481508 MRPL34Q9BQ48 92 aaKnown RBP5.38□□□□□ -1.55
SSBP1-210ENST00000481508 UBL5Q9BZL1 73 aa5.38□□□□□ -1.55
SSBP1-210ENST00000481508 hDV103S1A0JD37 113 aa5.37□□□□□ -1.55
SSBP1-210ENST00000481508 WFDC13Q8IUB5 93 aa5.37□□□□□ -1.55
SSBP1-210ENST00000481508 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
SSBP1-210ENST00000481508 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
SSBP1-210ENST00000481508 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
SSBP1-210ENST00000481508 MPLKIPQ8TAP9 179 aa5.35□□□□□ -1.55
SSBP1-210ENST00000481508 SPINK7P58062 85 aa5.33□□□□□ -1.56
SSBP1-210ENST00000481508 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
SSBP1-210ENST00000481508 CASC2Q6XLA1 102 aa5.33□□□□□ -1.56
SSBP1-210ENST00000481508 NDUFS5O43920 106 aa5.32□□□□□ -1.56
SSBP1-210ENST00000481508 Q5W150 140 aa5.32□□□□□ -1.56
SSBP1-210ENST00000481508 HCG22E2RYF7 251 aa5.3□□□□□ -1.56
SSBP1-210ENST00000481508 CXCL6P80162 114 aa5.29□□□□□ -1.56
SSBP1-210ENST00000481508 M0R2T5 61 aa5.28□□□□□ -1.56
SSBP1-210ENST00000481508 FAM240AA0A1B0GVK7 77 aa5.27□□□□□ -1.57
SSBP1-210ENST00000481508 FAM236DA0A1B0GTK5 79 aa5.26□□□□□ -1.57
SSBP1-210ENST00000481508 ACYP1P07311 99 aa5.26□□□□□ -1.57
SSBP1-210ENST00000481508 FAM236CP0DP71 79 aa5.26□□□□□ -1.57
SSBP1-210ENST00000481508 RBM12B-AS1Q9P1G2 102 aa5.26□□□□□ -1.57
SSBP1-210ENST00000481508 IGKV2D-30A0A075B6S6 120 aa5.23□□□□□ -1.57
SSBP1-210ENST00000481508 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
SSBP1-210ENST00000481508 C7orf65Q6ZTY9 151 aa5.2□□□□□ -1.58
SSBP1-210ENST00000481508 ATP5EP2Q5VTU8 51 aa5.19□□□□□ -1.58
SSBP1-210ENST00000481508 A0A087WVE0 104 aa5.18□□□□□ -1.58
SSBP1-210ENST00000481508 HIST1H4AP62805 103 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms