RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 LAMA5O15230 3695 aa6.76□□□□□ -1.33
DDX39B-219ENST00000481456 RELNP78509 3460 aa6.75□□□□□ -1.33
DDX39B-219ENST00000481456 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
DDX39B-219ENST00000481456 H3BS24 57 aa6.74□□□□□ -1.33
DDX39B-219ENST00000481456 DMBT1Q9UGM3 2413 aaPredicted RBP6.72□□□□□ -1.33
DDX39B-219ENST00000481456 UBR5O95071 2799 aaPredicted RBP6.71□□□□□ -1.33
DDX39B-219ENST00000481456 M0R2T5 61 aa6.71□□□□□ -1.33
DDX39B-219ENST00000481456 A0A0D9SG42 100 aa6.69□□□□□ -1.34
DDX39B-219ENST00000481456 STAB2Q8WWQ8 2551 aa6.69□□□□□ -1.34
DDX39B-219ENST00000481456 APCP25054 2843 aa6.69□□□□□ -1.34
DDX39B-219ENST00000481456 FBN2P35556 2912 aa6.69□□□□□ -1.34
DDX39B-219ENST00000481456 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
DDX39B-219ENST00000481456 MXRA5Q9NR99 2828 aa6.66□□□□□ -1.34
DDX39B-219ENST00000481456 CAMK2N1Q7Z7J9 78 aa6.65□□□□□ -1.34
DDX39B-219ENST00000481456 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
DDX39B-219ENST00000481456 MUC3AQ02505 3323 aa6.62□□□□□ -1.35
DDX39B-219ENST00000481456 H1FX-AS1Q4G0G2 97 aa6.61□□□□□ -1.35
DDX39B-219ENST00000481456 NF1P21359 2839 aa6.61□□□□□ -1.35
DDX39B-219ENST00000481456 SVEP1Q4LDE5 3571 aa6.6□□□□□ -1.35
DDX39B-219ENST00000481456 ITPR2Q14571 2701 aa6.59□□□□□ -1.35
DDX39B-219ENST00000481456 CRYBG3Q68DQ2 2970 aa6.59□□□□□ -1.35
DDX39B-219ENST00000481456 KMT2BQ9UMN6 2715 aaPredicted RBP6.58□□□□□ -1.36
DDX39B-219ENST00000481456 NIPBLQ6KC79 2804 aaeCLIP6.58□□□□□ -1.363e-23■■■■□ 23.3
DDX39B-219ENST00000481456 CELSR2Q9HCU4 2923 aa6.57□□□□□ -1.36
DDX39B-219ENST00000481456 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
DDX39B-219ENST00000481456 SEC61BP60468 96 aaKnown RBP6.56□□□□□ -1.36
DDX39B-219ENST00000481456 BSNQ9UPA5 3926 aa6.55□□□□□ -1.36
DDX39B-219ENST00000481456 HIVEP1P15822 2718 aa6.55□□□□□ -1.36
DDX39B-219ENST00000481456 KRTAP10-1P60331 282 aa6.55□□□□□ -1.36
DDX39B-219ENST00000481456 CELSR1Q9NYQ6 3014 aa6.54□□□□□ -1.36
DDX39B-219ENST00000481456 A0A0A0MQY5 61 aa6.54□□□□□ -1.36
DDX39B-219ENST00000481456 ROMO1P60602 79 aa6.54□□□□□ -1.36
DDX39B-219ENST00000481456 SPENQ96T58 3664 aaKnown RBP6.53□□□□□ -1.36
DDX39B-219ENST00000481456 NSD1Q96L73 2696 aaPredicted RBP6.53□□□□□ -1.36
DDX39B-219ENST00000481456 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
DDX39B-219ENST00000481456 KRTAP13-2Q52LG2 175 aa6.51□□□□□ -1.37
DDX39B-219ENST00000481456 Q5VSD8 79 aa6.51□□□□□ -1.37
DDX39B-219ENST00000481456 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
DDX39B-219ENST00000481456 S4R3F8 94 aa6.48□□□□□ -1.37
DDX39B-219ENST00000481456 R4GN34 69 aa6.46□□□□□ -1.38
DDX39B-219ENST00000481456 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
DDX39B-219ENST00000481456 KRTAP13-3Q3SY46 172 aa6.39□□□□□ -1.39
DDX39B-219ENST00000481456 KRTAP16-1A8MUX0 517 aa6.34□□□□□ -1.39
DDX39B-219ENST00000481456 A8MUU9 505 aa6.33□□□□□ -1.4
DDX39B-219ENST00000481456 TENM3Q9P273 2699 aa6.33□□□□□ -1.4
DDX39B-219ENST00000481456 H0YAA0 97 aa6.29□□□□□ -1.4
DDX39B-219ENST00000481456 KRTAP21-3Q3LHN1 58 aa6.29□□□□□ -1.4
DDX39B-219ENST00000481456 ANK3Q12955 4377 aaKnown RBP6.28□□□□□ -1.4
DDX39B-219ENST00000481456 C20orf166-AS1Q96NR2 134 aa6.28□□□□□ -1.4
DDX39B-219ENST00000481456 M0QZ58 72 aa6.28□□□□□ -1.4
DDX39B-219ENST00000481456 KRTAP1-4P0C5Y4 121 aa6.28□□□□□ -1.4
DDX39B-219ENST00000481456 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
DDX39B-219ENST00000481456 PDZD2O15018 2839 aa6.27□□□□□ -1.41
DDX39B-219ENST00000481456 TENM4Q6N022 2769 aa6.27□□□□□ -1.41
DDX39B-219ENST00000481456 VWFP04275 2813 aa6.22□□□□□ -1.41
DDX39B-219ENST00000481456 TENM1Q9UKZ4 2725 aa6.22□□□□□ -1.41
DDX39B-219ENST00000481456 CUBNO60494 3623 aa6.21□□□□□ -1.42
DDX39B-219ENST00000481456 ZFHX3Q15911 3703 aa6.18□□□□□ -1.42
DDX39B-219ENST00000481456 CSMD2Q7Z408 3487 aa6.17□□□□□ -1.42
DDX39B-219ENST00000481456 VPS13CQ709C8 3753 aa6.15□□□□□ -1.42
DDX39B-219ENST00000481456 NBPF19A0A087WUL8 3843 aa6.14□□□□□ -1.43
DDX39B-219ENST00000481456 NDUFAF8A1L188 74 aa6.14□□□□□ -1.43
DDX39B-219ENST00000481456 TGP01266 2768 aa6.07□□□□□ -1.44
DDX39B-219ENST00000481456 AKAP9Q99996 3911 aa6.07□□□□□ -1.44
DDX39B-219ENST00000481456 PKD1L1Q8TDX9 2849 aa6.06□□□□□ -1.44
DDX39B-219ENST00000481456 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
DDX39B-219ENST00000481456 OTOGQ6ZRI0 2925 aa6.02□□□□□ -1.45
DDX39B-219ENST00000481456 TRRAPQ9Y4A5 3859 aa6.01□□□□□ -1.45
DDX39B-219ENST00000481456 XP32Q5T750 250 aa5.95□□□□□ -1.46
DDX39B-219ENST00000481456 SRRM2Q9UQ35 2752 aaKnown RBP5.93□□□□□ -1.46
DDX39B-219ENST00000481456 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
DDX39B-219ENST00000481456 FBN1P35555 2871 aaKnown RBP5.92□□□□□ -1.46
DDX39B-219ENST00000481456 P0C880 135 aa5.9□□□□□ -1.46
DDX39B-219ENST00000481456 ZNF469Q96JG9 3925 aaPredicted RBP5.89□□□□□ -1.47
DDX39B-219ENST00000481456 HUWE1Q7Z6Z7 4374 aaKnown RBP5.88□□□□□ -1.47
DDX39B-219ENST00000481456 TNP1P09430 55 aa5.85□□□□□ -1.47
DDX39B-219ENST00000481456 TPRXLQ17RH7 258 aa5.83□□□□□ -1.48
DDX39B-219ENST00000481456 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
DDX39B-219ENST00000481456 TENM2Q9NT68 2774 aa5.8□□□□□ -1.48
DDX39B-219ENST00000481456 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
DDX39B-219ENST00000481456 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
DDX39B-219ENST00000481456 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
DDX39B-219ENST00000481456 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
DDX39B-219ENST00000481456 FBN3Q75N90 2809 aa5.73□□□□□ -1.49
DDX39B-219ENST00000481456 A0A1B0GVY2 172 aa5.71□□□□□ -1.5
DDX39B-219ENST00000481456 KRTAP10-8P60410 259 aa5.71□□□□□ -1.5
DDX39B-219ENST00000481456 MEGF8Q7Z7M0 2845 aa5.7□□□□□ -1.5
DDX39B-219ENST00000481456 KRTAP10-10P60014 251 aa5.62□□□□□ -1.51
DDX39B-219ENST00000481456 DNAH10Q8IVF4 4471 aa5.62□□□□□ -1.51
DDX39B-219ENST00000481456 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
DDX39B-219ENST00000481456 CSMD3Q7Z407 3707 aa5.61□□□□□ -1.51
DDX39B-219ENST00000481456 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
DDX39B-219ENST00000481456 KRTAP3-3Q9BYR6 98 aa5.61□□□□□ -1.51
DDX39B-219ENST00000481456 ALMS1Q8TCU4 4167 aa5.6□□□□□ -1.51
DDX39B-219ENST00000481456 DNAH9Q9NYC9 4486 aa5.59□□□□□ -1.51
DDX39B-219ENST00000481456 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
DDX39B-219ENST00000481456 DNAH1Q9P2D7 4330 aa5.57□□□□□ -1.52
DDX39B-219ENST00000481456 COL7A1Q02388 2944 aa5.54□□□□□ -1.52
DDX39B-219ENST00000481456 PLECQ15149 4684 aaKnown RBP5.53□□□□□ -1.52
DDX39B-219ENST00000481456 DNAH3Q8TD57 4116 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms