RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 MAP1BP46821 2468 aaKnown RBP0.55□□□□□ -2.32
ITGB1-212ENST00000480226 NCOR2Q9Y618 2525 aa0.54□□□□□ -2.32
ITGB1-212ENST00000480226 SPRR2DP22532 72 aa0.54□□□□□ -2.32
ITGB1-212ENST00000480226 USP24Q9UPU5 2620 aa0.53□□□□□ -2.32
ITGB1-212ENST00000480226 M0QY20 66 aa0.53□□□□□ -2.32
ITGB1-212ENST00000480226 SNRPGP62308 76 aaKnown RBP0.53□□□□□ -2.32
ITGB1-212ENST00000480226 A0A0C4DFX4 3053 aa0.52□□□□□ -2.33
ITGB1-212ENST00000480226 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
ITGB1-212ENST00000480226 MYCBP2O75592 4640 aa0.52□□□□□ -2.33
ITGB1-212ENST00000480226 H3BNG1 76 aa0.51□□□□□ -2.33
ITGB1-212ENST00000480226 LRP1Q07954 4544 aaKnown RBP0.51□□□□□ -2.33
ITGB1-212ENST00000480226 PDZD2O15018 2839 aa0.51□□□□□ -2.33
ITGB1-212ENST00000480226 SRRM2Q9UQ35 2752 aaKnown RBP0.5□□□□□ -2.33
ITGB1-212ENST00000480226 ACACAQ13085 2346 aa0.49□□□□□ -2.33
ITGB1-212ENST00000480226 HRNRQ86YZ3 2850 aaPredicted RBP0.49□□□□□ -2.33
ITGB1-212ENST00000480226 C9orf92A6NGG3 77 aa0.49□□□□□ -2.33
ITGB1-212ENST00000480226 SETXQ7Z333 2677 aaKnown RBP0.48□□□□□ -2.33
ITGB1-212ENST00000480226 COL6A5A8TX70 2615 aa0.48□□□□□ -2.33
ITGB1-212ENST00000480226 SPTBN4Q9H254 2564 aa0.48□□□□□ -2.33
ITGB1-212ENST00000480226 NSD1Q96L73 2696 aaPredicted RBP0.46□□□□□ -2.34
ITGB1-212ENST00000480226 A8MTW9 85 aa0.46□□□□□ -2.34
ITGB1-212ENST00000480226 SPRR2BP35325 72 aa0.46□□□□□ -2.34
ITGB1-212ENST00000480226 GCN1Q92616 2671 aaKnown RBP0.46□□□□□ -2.34
ITGB1-212ENST00000480226 VPS13BQ7Z7G8 4022 aa0.46□□□□□ -2.34
ITGB1-212ENST00000480226 STAB1Q9NY15 2570 aa0.46□□□□□ -2.34
ITGB1-212ENST00000480226 FLNBO75369 2602 aaKnown RBP0.45□□□□□ -2.34
ITGB1-212ENST00000480226 POLR2KP53803 58 aaKnown RBP0.45□□□□□ -2.34
ITGB1-212ENST00000480226 RPL39P62891 51 aaKnown RBP0.45□□□□□ -2.34
ITGB1-212ENST00000480226 CLPSL2Q6UWE3 100 aa0.45□□□□□ -2.34
ITGB1-212ENST00000480226 KMT2AQ03164 3969 aa0.44□□□□□ -2.34
ITGB1-212ENST00000480226 ZZEF1O43149 2961 aa0.44□□□□□ -2.34
ITGB1-212ENST00000480226 CACNA1AO00555 2505 aa0.43□□□□□ -2.34
ITGB1-212ENST00000480226 COL7A1Q02388 2944 aa0.43□□□□□ -2.34
ITGB1-212ENST00000480226 NF1P21359 2839 aa0.42□□□□□ -2.34
ITGB1-212ENST00000480226 M0QZ58 72 aa0.42□□□□□ -2.34
ITGB1-212ENST00000480226 DEFB110Q30KQ9 67 aa0.42□□□□□ -2.34
ITGB1-212ENST00000480226 IGSF10Q6WRI0 2623 aa0.42□□□□□ -2.34
ITGB1-212ENST00000480226 FLNCQ14315 2725 aa0.42□□□□□ -2.34
ITGB1-212ENST00000480226 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
ITGB1-212ENST00000480226 TNP1P09430 55 aa0.41□□□□□ -2.34
ITGB1-212ENST00000480226 SETD2Q9BYW2 2564 aaPredicted RBP0.41□□□□□ -2.34
ITGB1-212ENST00000480226 DMBT1Q9UGM3 2413 aaPredicted RBP0.4□□□□□ -2.34
ITGB1-212ENST00000480226 SACSQ9NZJ4 4579 aa0.4□□□□□ -2.34
ITGB1-212ENST00000480226 FAT4Q6V0I7 4981 aa0.4□□□□□ -2.35
ITGB1-212ENST00000480226 KRTAP6-2Q3LI66 62 aa0.4□□□□□ -2.35
ITGB1-212ENST00000480226 RPL39LQ96EH5 51 aaKnown RBP0.4□□□□□ -2.35
ITGB1-212ENST00000480226 SONP18583 2426 aaKnown RBP0.4□□□□□ -2.35
ITGB1-212ENST00000480226 MTORP42345 2549 aa0.4□□□□□ -2.35
ITGB1-212ENST00000480226 LPAP08519 4548 aa0.4□□□□□ -2.35
ITGB1-212ENST00000480226 MUC5ACP98088 5654 aa0.4□□□□□ -2.35
ITGB1-212ENST00000480226 CCDC168Q8NDH2 2452 aa0.39□□□□□ -2.35
ITGB1-212ENST00000480226 MAST4O15021 2626 aa0.39□□□□□ -2.35
ITGB1-212ENST00000480226 DCHS2Q6V1P9 2916 aa0.39□□□□□ -2.35
ITGB1-212ENST00000480226 CUBNO60494 3623 aa0.39□□□□□ -2.35
ITGB1-212ENST00000480226 DMXL1Q9Y485 3027 aa0.38□□□□□ -2.35
ITGB1-212ENST00000480226 FAM186AA6NE01 2351 aa0.38□□□□□ -2.35
ITGB1-212ENST00000480226 LRRK2Q5S007 2527 aa0.38□□□□□ -2.35
ITGB1-212ENST00000480226 SPG11Q96JI7 2443 aa0.37□□□□□ -2.35
ITGB1-212ENST00000480226 HMCN2Q8NDA2 5059 aa0.36□□□□□ -2.35
ITGB1-212ENST00000480226 PKD1P98161 4303 aa0.36□□□□□ -2.35
ITGB1-212ENST00000480226 LEAP2Q969E1 77 aa0.36□□□□□ -2.35
ITGB1-212ENST00000480226 SYNE2Q8WXH0 6885 aaKnown RBP0.35□□□□□ -2.35
ITGB1-212ENST00000480226 ACACBO00763 2458 aa0.35□□□□□ -2.35
ITGB1-212ENST00000480226 SPRR2AP35326 72 aa0.35□□□□□ -2.35
ITGB1-212ENST00000480226 ANKHD1Q8IWZ3 2542 aaKnown RBP0.35□□□□□ -2.35
ITGB1-212ENST00000480226 DNAH11Q96DT5 4516 aa0.35□□□□□ -2.35
ITGB1-212ENST00000480226 TACC2O95359 2948 aa0.34□□□□□ -2.36
ITGB1-212ENST00000480226 RIF1Q5UIP0 2472 aaKnown RBP0.34□□□□□ -2.36
ITGB1-212ENST00000480226 HECTD4Q9Y4D8 3996 aa0.34□□□□□ -2.36
ITGB1-212ENST00000480226 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
ITGB1-212ENST00000480226 HSPG2P98160 4391 aa0.33□□□□□ -2.36
ITGB1-212ENST00000480226 MACF1Q9UPN3 7388 aaKnown RBP0.33□□□□□ -2.36
ITGB1-212ENST00000480226 SVEP1Q4LDE5 3571 aa0.33□□□□□ -2.36
ITGB1-212ENST00000480226 PKHD1L1Q86WI1 4243 aa0.33□□□□□ -2.36
ITGB1-212ENST00000480226 ANKRD11Q6UB99 2663 aaPredicted RBP0.33□□□□□ -2.36
ITGB1-212ENST00000480226 ZANQ9Y493 2812 aa0.32□□□□□ -2.36
ITGB1-212ENST00000480226 LRP1BQ9NZR2 4599 aa0.32□□□□□ -2.36
ITGB1-212ENST00000480226 FSIP2Q5CZC0 6907 aa0.32□□□□□ -2.36
ITGB1-212ENST00000480226 TOMM7Q9P0U1 55 aa0.32□□□□□ -2.36
ITGB1-212ENST00000480226 SPENQ96T58 3664 aaKnown RBP0.32□□□□□ -2.36
ITGB1-212ENST00000480226 CHD7Q9P2D1 2997 aa0.31□□□□□ -2.36
ITGB1-212ENST00000480226 NBEAL2Q6ZNJ1 2754 aa0.31□□□□□ -2.36
ITGB1-212ENST00000480226 DNAH3Q8TD57 4116 aa0.31□□□□□ -2.36
ITGB1-212ENST00000480226 TENM2Q9NT68 2774 aa0.3□□□□□ -2.36
ITGB1-212ENST00000480226 ANK3Q12955 4377 aaKnown RBP0.3□□□□□ -2.36
ITGB1-212ENST00000480226 KMT2DO14686 5537 aa0.3□□□□□ -2.36
ITGB1-212ENST00000480226 COL6A3P12111 3177 aa0.3□□□□□ -2.36
ITGB1-212ENST00000480226 MT1AP04731 61 aa0.3□□□□□ -2.36
ITGB1-212ENST00000480226 FLGP20930 4061 aaPredicted RBP0.29□□□□□ -2.36
ITGB1-212ENST00000480226 SPRR2EP22531 72 aa0.29□□□□□ -2.36
ITGB1-212ENST00000480226 VPS13DQ5THJ4 4388 aa0.28□□□□□ -2.36
ITGB1-212ENST00000480226 COL12A1Q99715 3063 aa0.28□□□□□ -2.36
ITGB1-212ENST00000480226 RANBP2P49792 3224 aaKnown RBP0.27□□□□□ -2.37
ITGB1-212ENST00000480226 FASNP49327 2511 aaKnown RBP0.27□□□□□ -2.37
ITGB1-212ENST00000480226 MYO18BQ8IUG5 2567 aa0.27□□□□□ -2.37
ITGB1-212ENST00000480226 DNAH2Q9P225 4427 aa0.26□□□□□ -2.37
ITGB1-212ENST00000480226 SPART-AS1P0CW21 52 aa0.26□□□□□ -2.37
ITGB1-212ENST00000480226 KRTAP8-1Q8IUC2 63 aa0.26□□□□□ -2.37
ITGB1-212ENST00000480226 ARHGAP5-AS1Q96IT6 56 aa0.26□□□□□ -2.37
ITGB1-212ENST00000480226 TLN2Q9Y4G6 2542 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms