RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 SACSQ9NZJ4 4579 aa7.65□□□□□ -1.18
SEC13-216ENST00000479868 ATP5EP56381 51 aaPredicted RBP7.64□□□□□ -1.19
SEC13-216ENST00000479868 A0A087X002 238 aa7.64□□□□□ -1.19
SEC13-216ENST00000479868 IGHV6-1A0A0B4J1U7 121 aa7.63□□□□□ -1.19
SEC13-216ENST00000479868 A0A1B0GVX0 72 aa7.63□□□□□ -1.19
SEC13-216ENST00000479868 ASB16-AS1Q495Z4 193 aa7.63□□□□□ -1.19
SEC13-216ENST00000479868 C8orf17Q9NRJ1 99 aa7.63□□□□□ -1.19
SEC13-216ENST00000479868 MP68P56378 58 aa7.62□□□□□ -1.19
SEC13-216ENST00000479868 SSBP3-AS1Q7Z2R9 100 aa7.62□□□□□ -1.19
SEC13-216ENST00000479868 KRTAP13-2Q52LG2 175 aa7.61□□□□□ -1.19
SEC13-216ENST00000479868 LINC00208Q96KT6 92 aa7.61□□□□□ -1.19
SEC13-216ENST00000479868 H0Y9P7 68 aa7.61□□□□□ -1.19
SEC13-216ENST00000479868 CDK2AP2O75956 126 aa7.6□□□□□ -1.19
SEC13-216ENST00000479868 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
SEC13-216ENST00000479868 J3QL48 77 aa7.6□□□□□ -1.19
SEC13-216ENST00000479868 NOTCH2NLQ7Z3S9 236 aa7.6□□□□□ -1.19
SEC13-216ENST00000479868 TRAV22A0A0B4J277 110 aa7.57□□□□□ -1.2
SEC13-216ENST00000479868 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
SEC13-216ENST00000479868 RBM12B-AS1Q9P1G2 102 aa7.57□□□□□ -1.2
SEC13-216ENST00000479868 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
SEC13-216ENST00000479868 H3BPC8 53 aa7.54□□□□□ -1.2
SEC13-216ENST00000479868 C1orf64Q8NEQ6 169 aa7.54□□□□□ -1.2
SEC13-216ENST00000479868 MRPL34Q9BQ48 92 aaKnown RBP7.54□□□□□ -1.2
SEC13-216ENST00000479868 NDUFS5O43920 106 aa7.53□□□□□ -1.2
SEC13-216ENST00000479868 PRR4Q16378 134 aa7.53□□□□□ -1.2
SEC13-216ENST00000479868 MPLKIPQ8TAP9 179 aa7.53□□□□□ -1.2
SEC13-216ENST00000479868 TP53AIP1Q9HCN2 124 aa7.53□□□□□ -1.2
SEC13-216ENST00000479868 KTN1-AS1Q86SY8 53 aa7.51□□□□□ -1.21
SEC13-216ENST00000479868 DYNC1H1Q14204 4646 aaKnown RBP7.5□□□□□ -1.21
SEC13-216ENST00000479868 PLA2G1BP04054 148 aaKnown RBP7.49□□□□□ -1.21
SEC13-216ENST00000479868 A0A1B0GVY2 172 aa7.48□□□□□ -1.21
SEC13-216ENST00000479868 CYP4F30PQ9H0H9 118 aa7.48□□□□□ -1.21
SEC13-216ENST00000479868 C8orf87E5RJ46 101 aa7.47□□□□□ -1.21
SEC13-216ENST00000479868 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
SEC13-216ENST00000479868 RYR2Q92736 4967 aa7.47□□□□□ -1.21
SEC13-216ENST00000479868 KMT2CQ8NEZ4 4911 aaKnown RBP7.45□□□□□ -1.22
SEC13-216ENST00000479868 SPANXA2-OT1Q8N9U9 137 aa7.45□□□□□ -1.22
SEC13-216ENST00000479868 TYMSOSQ8TAI1 123 aa7.45□□□□□ -1.22
SEC13-216ENST00000479868 PCOTHQ58A44 107 aa7.43□□□□□ -1.22
SEC13-216ENST00000479868 LINC00313P59037 77 aa7.42□□□□□ -1.22
SEC13-216ENST00000479868 Q5W150 140 aa7.42□□□□□ -1.22
SEC13-216ENST00000479868 LIMD2Q9BT23 127 aa7.42□□□□□ -1.22
SEC13-216ENST00000479868 APOBP04114 4563 aaKnown RBP7.42□□□□□ -1.22
SEC13-216ENST00000479868 Q1T7F1 81 aa7.4□□□□□ -1.22
SEC13-216ENST00000479868 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.23
SEC13-216ENST00000479868 FAT1Q14517 4588 aa7.4□□□□□ -1.23
SEC13-216ENST00000479868 IGLV7-46A0A075B6I9 117 aa7.38□□□□□ -1.23
SEC13-216ENST00000479868 SPINK1P00995 79 aa7.38□□□□□ -1.23
SEC13-216ENST00000479868 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
SEC13-216ENST00000479868 Q8N9P0 234 aaPredicted RBP7.36□□□□□ -1.23
SEC13-216ENST00000479868 KRTAP16-1A8MUX0 517 aa7.35□□□□□ -1.23
SEC13-216ENST00000479868 LINC00304Q8N9R0 145 aa7.34□□□□□ -1.23
SEC13-216ENST00000479868 LOC101927531A0A1B0GV80 90 aa7.34□□□□□ -1.23
SEC13-216ENST00000479868 RETNLBQ9BQ08 111 aa7.32□□□□□ -1.24
SEC13-216ENST00000479868 FAM229AH3BQW9 127 aa7.3□□□□□ -1.24
SEC13-216ENST00000479868 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
SEC13-216ENST00000479868 Q75L30 129 aa7.29□□□□□ -1.24
SEC13-216ENST00000479868 COA5Q86WW8 74 aa7.29□□□□□ -1.24
SEC13-216ENST00000479868 PKHD1L1Q86WI1 4243 aa7.28□□□□□ -1.24
SEC13-216ENST00000479868 SPAG11AQ6PDA7 123 aa7.28□□□□□ -1.24
SEC13-216ENST00000479868 LCA10Q71F78 164 aa7.26□□□□□ -1.25
SEC13-216ENST00000479868 PSPHP1O15172 72 aa7.25□□□□□ -1.25
SEC13-216ENST00000479868 A8MUN3 132 aa7.24□□□□□ -1.25
SEC13-216ENST00000479868 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
SEC13-216ENST00000479868 C7orf65Q6ZTY9 151 aa7.24□□□□□ -1.25
SEC13-216ENST00000479868 A6NN06 94 aa7.23□□□□□ -1.25
SEC13-216ENST00000479868 IGKV2-30P06310 120 aa7.23□□□□□ -1.25
SEC13-216ENST00000479868 HRES1P13985 223 aa7.23□□□□□ -1.25
SEC13-216ENST00000479868 RYR3Q15413 4870 aa7.23□□□□□ -1.25
SEC13-216ENST00000479868 A8MU10 97 aa7.19□□□□□ -1.26
SEC13-216ENST00000479868 IGKV2D-30A0A075B6S6 120 aa7.17□□□□□ -1.26
SEC13-216ENST00000479868 HSPG2P98160 4391 aa7.17□□□□□ -1.26
SEC13-216ENST00000479868 Q5VV11 94 aa7.17□□□□□ -1.26
SEC13-216ENST00000479868 C9orf92A6NGG3 77 aa7.16□□□□□ -1.26
SEC13-216ENST00000479868 SPTSSBQ8NFR3 76 aa7.16□□□□□ -1.26
SEC13-216ENST00000479868 FLG2Q5D862 2391 aaPredicted RBP7.15□□□□□ -1.27
SEC13-216ENST00000479868 LRP1Q07954 4544 aaKnown RBP7.15□□□□□ -1.27
SEC13-216ENST00000479868 DMAC1Q96GE9 116 aa7.15□□□□□ -1.27
SEC13-216ENST00000479868 ACYP2P14621 99 aa7.13□□□□□ -1.27
SEC13-216ENST00000479868 Q5VSD8 79 aa7.12□□□□□ -1.27
SEC13-216ENST00000479868 TNXBP22105 4242 aa7.11□□□□□ -1.27
SEC13-216ENST00000479868 PRR15LQ9BU68 103 aa7.11□□□□□ -1.27
SEC13-216ENST00000479868 CHKB-CPT1BH3BT56 60 aa7.1□□□□□ -1.27
SEC13-216ENST00000479868 Q8N1X5 172 aa7.1□□□□□ -1.27
SEC13-216ENST00000479868 RYR1P21817 5038 aa7.1□□□□□ -1.27
SEC13-216ENST00000479868 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
SEC13-216ENST00000479868 KRTAP17-1Q9BYP8 105 aa7.08□□□□□ -1.28
SEC13-216ENST00000479868 A8MUU9 505 aa7.08□□□□□ -1.28
SEC13-216ENST00000479868 LINC01554Q52M75 96 aa7.07□□□□□ -1.28
SEC13-216ENST00000479868 LINC01558Q9Y6Z2 57 aa7.06□□□□□ -1.28
SEC13-216ENST00000479868 KRTAP10-8P60410 259 aa7.06□□□□□ -1.28
SEC13-216ENST00000479868 KIAA1109Q2LD37 5005 aa7.04□□□□□ -1.28
SEC13-216ENST00000479868 CDC42SE1Q9NRR8 79 aa7.04□□□□□ -1.28
SEC13-216ENST00000479868 FAT3Q8TDW7 4589 aa7.04□□□□□ -1.28
SEC13-216ENST00000479868 DMBT1Q9UGM3 2413 aaPredicted RBP7.01□□□□□ -1.29
SEC13-216ENST00000479868 A6NED7 52 aa6.99□□□□□ -1.29
SEC13-216ENST00000479868 MYCBP2O75592 4640 aa6.98□□□□□ -1.29
SEC13-216ENST00000479868 EPPK1P58107 5090 aaKnown RBP6.97□□□□□ -1.29
SEC13-216ENST00000479868 SPINK7P58062 85 aa6.93□□□□□ -1.3
SEC13-216ENST00000479868 SEC61BP60468 96 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms