RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 ST20-AS1Q8NBB2 130 aa4.43□□□□□ -1.7
HMGCL-205ENST00000479458 DHRS4-AS1Q9P1J3 65 aa4.43□□□□□ -1.7
HMGCL-205ENST00000479458 TRBV7-6A0A0J9YX20 115 aa4.42□□□□□ -1.7
HMGCL-205ENST00000479458 CCKP06307 115 aa4.42□□□□□ -1.7
HMGCL-205ENST00000479458 SERP2Q8N6R1 65 aa4.42□□□□□ -1.7
HMGCL-205ENST00000479458 Q8NBF4 154 aa4.42□□□□□ -1.7
HMGCL-205ENST00000479458 LINC00846Q9NV44 126 aa4.42□□□□□ -1.7
HMGCL-205ENST00000479458 IGKV3D-7A0A0C4DH55 119 aa4.41□□□□□ -1.7
HMGCL-205ENST00000479458 hADV29S1A0JD25 119 aa4.41□□□□□ -1.7
HMGCL-205ENST00000479458 SPRR1BP22528 89 aa4.41□□□□□ -1.7
HMGCL-205ENST00000479458 RPS28P62857 69 aaKnown RBP4.41□□□□□ -1.7
HMGCL-205ENST00000479458 MOBPQ13875 183 aa4.41□□□□□ -1.7
HMGCL-205ENST00000479458 SPAG11AQ6PDA7 123 aa4.41□□□□□ -1.7
HMGCL-205ENST00000479458 IGLV9-49A0A0B4J1Y8 123 aa4.4□□□□□ -1.71
HMGCL-205ENST00000479458 H3BQ85 93 aa4.4□□□□□ -1.71
HMGCL-205ENST00000479458 TMEM256-PLSCR3K7ERE1 68 aa4.4□□□□□ -1.71
HMGCL-205ENST00000479458 SSBP3-AS1Q7Z2R9 100 aa4.4□□□□□ -1.71
HMGCL-205ENST00000479458 RETNLBQ9BQ08 111 aa4.4□□□□□ -1.71
HMGCL-205ENST00000479458 SPINK1P00995 79 aa4.38□□□□□ -1.71
HMGCL-205ENST00000479458 UBL5Q9BZL1 73 aa4.38□□□□□ -1.71
HMGCL-205ENST00000479458 IGLV5-48A0A075B6I7 105 aa4.37□□□□□ -1.71
HMGCL-205ENST00000479458 A0A087WVE0 104 aa4.37□□□□□ -1.71
HMGCL-205ENST00000479458 LOC110117498A0A087WWA1 95 aa4.37□□□□□ -1.71
HMGCL-205ENST00000479458 LAMTOR3Q9UHA4 124 aa4.37□□□□□ -1.71
HMGCL-205ENST00000479458 RPS29P62273 56 aaKnown RBP4.36□□□□□ -1.71
HMGCL-205ENST00000479458 TPRXLQ17RH7 258 aa4.36□□□□□ -1.71
HMGCL-205ENST00000479458 DEFB105AQ8NG35 78 aa4.36□□□□□ -1.71
HMGCL-205ENST00000479458 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
HMGCL-205ENST00000479458 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
HMGCL-205ENST00000479458 PDE6GP18545 87 aa4.35□□□□□ -1.71
HMGCL-205ENST00000479458 C5orf47Q569G3 176 aa4.35□□□□□ -1.71
HMGCL-205ENST00000479458 LINC00575Q6W349 94 aa4.35□□□□□ -1.71
HMGCL-205ENST00000479458 Q6ZQT0 140 aa4.35□□□□□ -1.71
HMGCL-205ENST00000479458 SMIM29Q86T20 159 aa4.35□□□□□ -1.71
HMGCL-205ENST00000479458 FP248Q71RG6 208 aaPredicted RBP4.34□□□□□ -1.71
HMGCL-205ENST00000479458 Q8N377 158 aa4.34□□□□□ -1.71
HMGCL-205ENST00000479458 TRAV7A0A075B6U4 112 aa4.33□□□□□ -1.72
HMGCL-205ENST00000479458 RBM3P98179 157 aaKnown RBP4.33□□□□□ -1.72
HMGCL-205ENST00000479458 CYSTM1Q9H1C7 97 aa4.33□□□□□ -1.72
HMGCL-205ENST00000479458 FAM236DA0A1B0GTK5 79 aa4.32□□□□□ -1.72
HMGCL-205ENST00000479458 FAM236CP0DP71 79 aa4.32□□□□□ -1.72
HMGCL-205ENST00000479458 CXCL6P80162 114 aa4.32□□□□□ -1.72
HMGCL-205ENST00000479458 Q6ZQY7 126 aa4.32□□□□□ -1.72
HMGCL-205ENST00000479458 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
HMGCL-205ENST00000479458 CD164Q04900 197 aa4.31□□□□□ -1.72
HMGCL-205ENST00000479458 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.31□□□□□ -1.72
HMGCL-205ENST00000479458 DSCR8Q96T75 97 aa4.31□□□□□ -1.72
HMGCL-205ENST00000479458 ATP5EP56381 51 aaPredicted RBP4.3□□□□□ -1.72
HMGCL-205ENST00000479458 HRCT1Q6UXD1 115 aa4.3□□□□□ -1.72
HMGCL-205ENST00000479458 Q6ZVQ6 151 aa4.3□□□□□ -1.72
HMGCL-205ENST00000479458 LIMD2Q9BT23 127 aa4.3□□□□□ -1.72
HMGCL-205ENST00000479458 A0A0G2JQZ4 141 aa4.29□□□□□ -1.72
HMGCL-205ENST00000479458 TRBV7-4A0A0J9YYF1 115 aa4.29□□□□□ -1.72
HMGCL-205ENST00000479458 KLKP1Q107X0 134 aa4.29□□□□□ -1.72
HMGCL-205ENST00000479458 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
HMGCL-205ENST00000479458 C20orf197Q8N268 126 aa4.29□□□□□ -1.72
HMGCL-205ENST00000479458 SERP1Q9Y6X1 66 aa4.29□□□□□ -1.72
HMGCL-205ENST00000479458 IGLV8-61A0A075B6I0 122 aa4.28□□□□□ -1.72
HMGCL-205ENST00000479458 F8WEM9 126 aa4.28□□□□□ -1.72
HMGCL-205ENST00000479458 NDUFC1O43677 76 aa4.28□□□□□ -1.72
HMGCL-205ENST00000479458 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
HMGCL-205ENST00000479458 Q5XG85 94 aa4.27□□□□□ -1.73
HMGCL-205ENST00000479458 H7BZZ5 65 aa4.26□□□□□ -1.73
HMGCL-205ENST00000479458 IGFL1Q6UW32 110 aa4.25□□□□□ -1.73
HMGCL-205ENST00000479458 MT1HP80294 61 aa4.24□□□□□ -1.73
HMGCL-205ENST00000479458 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
HMGCL-205ENST00000479458 KRTAP10-6P60371 365 aaPredicted RBP4.23□□□□□ -1.73
HMGCL-205ENST00000479458 NREPQ16612 68 aa4.23□□□□□ -1.73
HMGCL-205ENST00000479458 C1orf195Q5TG92 126 aa4.23□□□□□ -1.73
HMGCL-205ENST00000479458 KRTAP4-1Q9BYQ7 146 aa4.23□□□□□ -1.73
HMGCL-205ENST00000479458 A0A1B0GW54 56 aa4.22□□□□□ -1.73
HMGCL-205ENST00000479458 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
HMGCL-205ENST00000479458 SMIM26A0A096LP01 95 aa4.21□□□□□ -1.74
HMGCL-205ENST00000479458 IGKV4-1P06312 121 aa4.21□□□□□ -1.74
HMGCL-205ENST00000479458 KRTAP19-2Q3LHN2 52 aa4.21□□□□□ -1.74
HMGCL-205ENST00000479458 SEC61BP60468 96 aaKnown RBP4.2□□□□□ -1.74
HMGCL-205ENST00000479458 C4orf26Q17RF5 130 aa4.2□□□□□ -1.74
HMGCL-205ENST00000479458 SNURFQ9Y675 71 aa4.2□□□□□ -1.74
HMGCL-205ENST00000479458 C9orf92A6NGG3 77 aa4.19□□□□□ -1.74
HMGCL-205ENST00000479458 BPY2O14599 106 aa4.19□□□□□ -1.74
HMGCL-205ENST00000479458 TMEM254Q8TBM7 123 aa4.19□□□□□ -1.74
HMGCL-205ENST00000479458 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
HMGCL-205ENST00000479458 OCR1Q9BZK8 76 aa4.17□□□□□ -1.74
HMGCL-205ENST00000479458 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
HMGCL-205ENST00000479458 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
HMGCL-205ENST00000479458 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
HMGCL-205ENST00000479458 USH2AO75445 5202 aa4.16□□□□□ -1.74
HMGCL-205ENST00000479458 A0A087WSZ3 146 aa4.15□□□□□ -1.75
HMGCL-205ENST00000479458 A0A1W2PNM2 257 aa4.15□□□□□ -1.75
HMGCL-205ENST00000479458 PCOTHQ58A44 107 aa4.13□□□□□ -1.75
HMGCL-205ENST00000479458 Q8N9L7 120 aa4.13□□□□□ -1.75
HMGCL-205ENST00000479458 Q96NJ1 140 aa4.13□□□□□ -1.75
HMGCL-205ENST00000479458 RPL37P61927 97 aaKnown RBP4.12□□□□□ -1.75
HMGCL-205ENST00000479458 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
HMGCL-205ENST00000479458 ZCCHC13Q8WW36 166 aaKnown RBP4.09□□□□□ -1.75
HMGCL-205ENST00000479458 HCG22E2RYF7 251 aa4.08□□□□□ -1.76
HMGCL-205ENST00000479458 DSCR10P59022 87 aa4.08□□□□□ -1.76
HMGCL-205ENST00000479458 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
HMGCL-205ENST00000479458 LINC00472Q9H8W2 130 aa4.08□□□□□ -1.76
HMGCL-205ENST00000479458 hDV103S1A0JD37 113 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms