RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 TMEM256-PLSCR3K7ERE1 68 aa7.41□□□□□ -1.22
DDX56-210ENST00000479440 MDN1Q9NU22 5596 aa7.41□□□□□ -1.22
DDX56-210ENST00000479440 VPS25Q9BRG1 176 aa7.4□□□□□ -1.22
DDX56-210ENST00000479440 NDUFB1O75438 58 aa7.39□□□□□ -1.23
DDX56-210ENST00000479440 KRTAP5-9P26371 169 aa7.39□□□□□ -1.23
DDX56-210ENST00000479440 S100A2P29034 98 aa7.39□□□□□ -1.23
DDX56-210ENST00000479440 DLEU1O43261 78 aa7.38□□□□□ -1.23
DDX56-210ENST00000479440 TRIAP1O43715 76 aa7.38□□□□□ -1.23
DDX56-210ENST00000479440 HIST1H2BLQ99880 126 aa7.38□□□□□ -1.23
DDX56-210ENST00000479440 PRO1854Q9UHT4 67 aa7.37□□□□□ -1.23
DDX56-210ENST00000479440 TMEM238LA0A1B0GVL6 79 aa7.36□□□□□ -1.23
DDX56-210ENST00000479440 A6NJY4 79 aa7.36□□□□□ -1.23
DDX56-210ENST00000479440 C21orf62-AS1Q17RA5 79 aa7.36□□□□□ -1.23
DDX56-210ENST00000479440 HIST3H2BBQ8N257 126 aa7.36□□□□□ -1.23
DDX56-210ENST00000479440 IGKV3D-7A0A0C4DH55 119 aa7.35□□□□□ -1.23
DDX56-210ENST00000479440 Q5VV11 94 aa7.35□□□□□ -1.23
DDX56-210ENST00000479440 KMT2DO14686 5537 aa7.34□□□□□ -1.23
DDX56-210ENST00000479440 UBE2V1Q13404 147 aa7.34□□□□□ -1.23
DDX56-210ENST00000479440 C8orf17Q9NRJ1 99 aa7.34□□□□□ -1.23
DDX56-210ENST00000479440 HIGD1BQ9P298 99 aa7.34□□□□□ -1.23
DDX56-210ENST00000479440 MT1BP07438 61 aa7.32□□□□□ -1.24
DDX56-210ENST00000479440 FAM236AA0A1B0GUQ0 79 aa7.3□□□□□ -1.24
DDX56-210ENST00000479440 FAM236BA0A1B0GV22 79 aa7.3□□□□□ -1.24
DDX56-210ENST00000479440 KRTAP2-3P0C7H8 128 aa7.3□□□□□ -1.24
DDX56-210ENST00000479440 CEND1Q8N111 149 aa7.3□□□□□ -1.24
DDX56-210ENST00000479440 KRTAP2-4Q9BYR9 128 aa7.3□□□□□ -1.24
DDX56-210ENST00000479440 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
DDX56-210ENST00000479440 RBM3P98179 157 aaKnown RBP7.29□□□□□ -1.24
DDX56-210ENST00000479440 Q6ZVQ6 151 aa7.29□□□□□ -1.24
DDX56-210ENST00000479440 PSMB2P49721 201 aa7.27□□□□□ -1.25
DDX56-210ENST00000479440 C14orf144Q96I85 54 aa7.27□□□□□ -1.25
DDX56-210ENST00000479440 COX6CP09669 75 aa7.26□□□□□ -1.25
DDX56-210ENST00000479440 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
DDX56-210ENST00000479440 Q6ZQT0 140 aa7.25□□□□□ -1.25
DDX56-210ENST00000479440 C2orf91Q6ZV80 131 aa7.25□□□□□ -1.25
DDX56-210ENST00000479440 FXYD2P54710 66 aa7.24□□□□□ -1.25
DDX56-210ENST00000479440 C9JAW5 83 aa7.22□□□□□ -1.25
DDX56-210ENST00000479440 SPRR2GQ9BYE4 73 aa7.21□□□□□ -1.26
DDX56-210ENST00000479440 S100A6P06703 90 aa7.2□□□□□ -1.26
DDX56-210ENST00000479440 SPATA45Q537H7 98 aa7.2□□□□□ -1.26
DDX56-210ENST00000479440 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
DDX56-210ENST00000479440 MRPL34Q9BQ48 92 aaKnown RBP7.2□□□□□ -1.26
DDX56-210ENST00000479440 PAM16Q9Y3D7 125 aa7.2□□□□□ -1.26
DDX56-210ENST00000479440 IGKV2D-30A0A075B6S6 120 aa7.19□□□□□ -1.26
DDX56-210ENST00000479440 IGKV2-30P06310 120 aa7.19□□□□□ -1.26
DDX56-210ENST00000479440 TMEM254Q8TBM7 123 aa7.19□□□□□ -1.26
DDX56-210ENST00000479440 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
DDX56-210ENST00000479440 NDUFS5O43920 106 aa7.16□□□□□ -1.26
DDX56-210ENST00000479440 PRR15Q8IV56 129 aa7.16□□□□□ -1.26
DDX56-210ENST00000479440 MMP24-AS1A0A0U1RRL7 71 aa7.15□□□□□ -1.26
DDX56-210ENST00000479440 K7ERJ3 54 aa7.15□□□□□ -1.26
DDX56-210ENST00000479440 A0A1B0GW54 56 aa7.14□□□□□ -1.27
DDX56-210ENST00000479440 VAMP8Q9BV40 100 aa7.14□□□□□ -1.27
DDX56-210ENST00000479440 IMUPQ9GZP8 106 aa7.14□□□□□ -1.27
DDX56-210ENST00000479440 hDV103S1A0JD37 113 aa7.11□□□□□ -1.27
DDX56-210ENST00000479440 SPRR2EP22531 72 aa7.1□□□□□ -1.27
DDX56-210ENST00000479440 SPRR2BP35325 72 aa7.1□□□□□ -1.27
DDX56-210ENST00000479440 SPRR2AP35326 72 aa7.1□□□□□ -1.27
DDX56-210ENST00000479440 S100A1P23297 94 aa7.09□□□□□ -1.27
DDX56-210ENST00000479440 HSD52Q0P140 79 aa7.09□□□□□ -1.27
DDX56-210ENST00000479440 C4orf26Q17RF5 130 aa7.09□□□□□ -1.27
DDX56-210ENST00000479440 BAALC-AS2P0C853 105 aa7.07□□□□□ -1.28
DDX56-210ENST00000479440 SCGB1C2P0DMR2 95 aa7.07□□□□□ -1.28
DDX56-210ENST00000479440 SPRR2FQ96RM1 72 aa7.07□□□□□ -1.28
DDX56-210ENST00000479440 S4R3F8 94 aa7.07□□□□□ -1.28
DDX56-210ENST00000479440 LOC110117498A0A087WWA1 95 aa7.06□□□□□ -1.28
DDX56-210ENST00000479440 JMJD7-PLA2G4BH0Y9G9 81 aa7.06□□□□□ -1.28
DDX56-210ENST00000479440 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
DDX56-210ENST00000479440 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
DDX56-210ENST00000479440 NREPQ16612 68 aa7.04□□□□□ -1.28
DDX56-210ENST00000479440 KRTAP2-2Q9BYT5 123 aa7.04□□□□□ -1.28
DDX56-210ENST00000479440 KRTAP2-1Q9BYU5 128 aa7.04□□□□□ -1.28
DDX56-210ENST00000479440 PDE6GP18545 87 aa7.03□□□□□ -1.28
DDX56-210ENST00000479440 Q5W150 140 aa7.03□□□□□ -1.28
DDX56-210ENST00000479440 K7EQZ3 153 aa7.02□□□□□ -1.29
DDX56-210ENST00000479440 LCA10Q71F78 164 aa6.98□□□□□ -1.29
DDX56-210ENST00000479440 SMCPP49901 116 aaPredicted RBP6.96□□□□□ -1.3
DDX56-210ENST00000479440 C14orf132Q9NPU4 83 aa6.95□□□□□ -1.3
DDX56-210ENST00000479440 ATXN8Q156A1 80 aa6.94□□□□□ -1.3
DDX56-210ENST00000479440 CRIPTQ9P021 101 aa6.94□□□□□ -1.3
DDX56-210ENST00000479440 HCG22E2RYF7 251 aa6.93□□□□□ -1.3
DDX56-210ENST00000479440 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
DDX56-210ENST00000479440 CXCL6P80162 114 aa6.9□□□□□ -1.3
DDX56-210ENST00000479440 C1orf64Q8NEQ6 169 aa6.9□□□□□ -1.3
DDX56-210ENST00000479440 LCE1AQ5T7P2 110 aa6.89□□□□□ -1.31
DDX56-210ENST00000479440 CASC2Q6XLA1 102 aa6.89□□□□□ -1.31
DDX56-210ENST00000479440 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
DDX56-210ENST00000479440 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
DDX56-210ENST00000479440 BPY2O14599 106 aa6.87□□□□□ -1.31
DDX56-210ENST00000479440 SPRR2DP22532 72 aa6.87□□□□□ -1.31
DDX56-210ENST00000479440 UQCR10Q9UDW1 63 aa6.82□□□□□ -1.32
DDX56-210ENST00000479440 Q8N9L7 120 aa6.79□□□□□ -1.32
DDX56-210ENST00000479440 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
DDX56-210ENST00000479440 PYY3Q5JQD4 70 aa6.75□□□□□ -1.33
DDX56-210ENST00000479440 MT1XP80297 61 aa6.74□□□□□ -1.33
DDX56-210ENST00000479440 NAA38Q9BRA0 125 aaKnown RBP6.74□□□□□ -1.33
DDX56-210ENST00000479440 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
DDX56-210ENST00000479440 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
DDX56-210ENST00000479440 GPR98Q8WXG9 6306 aa6.72□□□□□ -1.33
DDX56-210ENST00000479440 A8MUN3 132 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms