RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
RAD51B-208ENST00000479335 C20orf197Q8N268 126 aa5.72□□□□□ -1.49
RAD51B-208ENST00000479335 LIMD2Q9BT23 127 aa5.72□□□□□ -1.49
RAD51B-208ENST00000479335 MMP24-AS1A0A0U1RRL7 71 aa5.71□□□□□ -1.5
RAD51B-208ENST00000479335 WFDC13Q8IUB5 93 aa5.71□□□□□ -1.5
RAD51B-208ENST00000479335 SPINK1P00995 79 aa5.7□□□□□ -1.5
RAD51B-208ENST00000479335 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
RAD51B-208ENST00000479335 C5orf47Q569G3 176 aa5.7□□□□□ -1.5
RAD51B-208ENST00000479335 XP32Q5T750 250 aa5.7□□□□□ -1.5
RAD51B-208ENST00000479335 SPAG11AQ6PDA7 123 aa5.7□□□□□ -1.5
RAD51B-208ENST00000479335 APOBP04114 4563 aaKnown RBP5.7□□□□□ -1.5
RAD51B-208ENST00000479335 hDV103S1A0JD37 113 aa5.7□□□□□ -1.5
RAD51B-208ENST00000479335 C8orf17Q9NRJ1 99 aa5.7□□□□□ -1.5
RAD51B-208ENST00000479335 NDUFC1O43677 76 aa5.69□□□□□ -1.5
RAD51B-208ENST00000479335 TMEM254Q8TBM7 123 aa5.69□□□□□ -1.5
RAD51B-208ENST00000479335 IGHV6-1A0A0B4J1U7 121 aa5.67□□□□□ -1.5
RAD51B-208ENST00000479335 C8orf87E5RJ46 101 aa5.67□□□□□ -1.5
RAD51B-208ENST00000479335 TMEM258P61165 79 aa5.67□□□□□ -1.5
RAD51B-208ENST00000479335 C1orf195Q5TG92 126 aa5.67□□□□□ -1.5
RAD51B-208ENST00000479335 A0A0U1RQV1 116 aa5.66□□□□□ -1.5
RAD51B-208ENST00000479335 PRR26Q8N8Z3 221 aa5.66□□□□□ -1.5
RAD51B-208ENST00000479335 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
RAD51B-208ENST00000479335 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
RAD51B-208ENST00000479335 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
RAD51B-208ENST00000479335 H3BPC8 53 aa5.65□□□□□ -1.51
RAD51B-208ENST00000479335 SNURFQ9Y675 71 aa5.65□□□□□ -1.51
RAD51B-208ENST00000479335 H7BZZ5 65 aa5.64□□□□□ -1.51
RAD51B-208ENST00000479335 MRPL34Q9BQ48 92 aaKnown RBP5.64□□□□□ -1.51
RAD51B-208ENST00000479335 MP68P56378 58 aa5.63□□□□□ -1.51
RAD51B-208ENST00000479335 ZCCHC13Q8WW36 166 aaKnown RBP5.62□□□□□ -1.51
RAD51B-208ENST00000479335 FAT1Q14517 4588 aa5.61□□□□□ -1.51
RAD51B-208ENST00000479335 LINC00313P59037 77 aa5.61□□□□□ -1.51
RAD51B-208ENST00000479335 NOTCH2NLQ7Z3S9 236 aa5.6□□□□□ -1.51
RAD51B-208ENST00000479335 Q5VSD8 79 aa5.59□□□□□ -1.51
RAD51B-208ENST00000479335 TRAV22A0A0B4J277 110 aa5.59□□□□□ -1.52
RAD51B-208ENST00000479335 H0Y9P7 68 aa5.59□□□□□ -1.52
RAD51B-208ENST00000479335 ATP5EP56381 51 aaPredicted RBP5.59□□□□□ -1.52
RAD51B-208ENST00000479335 EPPK1P58107 5090 aaKnown RBP5.58□□□□□ -1.52
RAD51B-208ENST00000479335 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
RAD51B-208ENST00000479335 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
RAD51B-208ENST00000479335 FAM236DA0A1B0GTK5 79 aa5.56□□□□□ -1.52
RAD51B-208ENST00000479335 NDUFS5O43920 106 aa5.56□□□□□ -1.52
RAD51B-208ENST00000479335 FAM236CP0DP71 79 aa5.56□□□□□ -1.52
RAD51B-208ENST00000479335 Q8N9P0 234 aaPredicted RBP5.56□□□□□ -1.52
RAD51B-208ENST00000479335 LINC00208Q96KT6 92 aa5.56□□□□□ -1.52
RAD51B-208ENST00000479335 KRTAP10-8P60410 259 aa5.55□□□□□ -1.52
RAD51B-208ENST00000479335 C1orf64Q8NEQ6 169 aa5.55□□□□□ -1.52
RAD51B-208ENST00000479335 RYR1P21817 5038 aa5.54□□□□□ -1.52
RAD51B-208ENST00000479335 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
RAD51B-208ENST00000479335 Q8N1X5 172 aa5.53□□□□□ -1.52
RAD51B-208ENST00000479335 HSPG2P98160 4391 aa5.52□□□□□ -1.53
RAD51B-208ENST00000479335 KRTAP13-3Q3SY46 172 aa5.5□□□□□ -1.53
RAD51B-208ENST00000479335 SPANXA2-OT1Q8N9U9 137 aa5.5□□□□□ -1.53
RAD51B-208ENST00000479335 SERP1Q9Y6X1 66 aa5.5□□□□□ -1.53
RAD51B-208ENST00000479335 LOC101927531A0A1B0GV80 90 aa5.49□□□□□ -1.53
RAD51B-208ENST00000479335 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
RAD51B-208ENST00000479335 Q5W150 140 aa5.48□□□□□ -1.53
RAD51B-208ENST00000479335 CYP4F30PQ9H0H9 118 aa5.48□□□□□ -1.53
RAD51B-208ENST00000479335 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
RAD51B-208ENST00000479335 FLG2Q5D862 2391 aaPredicted RBP5.45□□□□□ -1.54
RAD51B-208ENST00000479335 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
RAD51B-208ENST00000479335 FP248Q71RG6 208 aaPredicted RBP5.44□□□□□ -1.54
RAD51B-208ENST00000479335 OXTP01178 125 aa5.42□□□□□ -1.54
RAD51B-208ENST00000479335 C20orf166-AS1Q96NR2 134 aa5.42□□□□□ -1.54
RAD51B-208ENST00000479335 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
RAD51B-208ENST00000479335 KIAA1109Q2LD37 5005 aa5.42□□□□□ -1.54
RAD51B-208ENST00000479335 A8MUU9 505 aa5.41□□□□□ -1.54
RAD51B-208ENST00000479335 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
RAD51B-208ENST00000479335 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
RAD51B-208ENST00000479335 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
RAD51B-208ENST00000479335 LRP1Q07954 4544 aaKnown RBP5.4□□□□□ -1.55
RAD51B-208ENST00000479335 TNXBP22105 4242 aa5.4□□□□□ -1.55
RAD51B-208ENST00000479335 PCOTHQ58A44 107 aa5.4□□□□□ -1.55
RAD51B-208ENST00000479335 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.55
RAD51B-208ENST00000479335 SMIM26A0A096LP01 95 aa5.38□□□□□ -1.55
RAD51B-208ENST00000479335 C9orf92A6NGG3 77 aa5.37□□□□□ -1.55
RAD51B-208ENST00000479335 PRR4Q16378 134 aa5.37□□□□□ -1.55
RAD51B-208ENST00000479335 Q75L30 129 aa5.36□□□□□ -1.55
RAD51B-208ENST00000479335 DMBT1Q9UGM3 2413 aaPredicted RBP5.34□□□□□ -1.55
RAD51B-208ENST00000479335 HERC2O95714 4834 aa5.33□□□□□ -1.56
RAD51B-208ENST00000479335 HRES1P13985 223 aa5.33□□□□□ -1.56
RAD51B-208ENST00000479335 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
RAD51B-208ENST00000479335 IGKV2D-30A0A075B6S6 120 aa5.32□□□□□ -1.56
RAD51B-208ENST00000479335 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
RAD51B-208ENST00000479335 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.3□□□□□ -1.56
RAD51B-208ENST00000479335 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
RAD51B-208ENST00000479335 ACYP2P14621 99 aa5.3□□□□□ -1.56
RAD51B-208ENST00000479335 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
RAD51B-208ENST00000479335 COA5Q86WW8 74 aa5.29□□□□□ -1.56
RAD51B-208ENST00000479335 DMAC1Q96GE9 116 aa5.29□□□□□ -1.56
RAD51B-208ENST00000479335 MYCBP2O75592 4640 aa5.28□□□□□ -1.56
RAD51B-208ENST00000479335 RPL37P61927 97 aaKnown RBP5.26□□□□□ -1.57
RAD51B-208ENST00000479335 ATP11AUNQ6ZP68 121 aa5.26□□□□□ -1.57
RAD51B-208ENST00000479335 TPRXLQ17RH7 258 aa5.25□□□□□ -1.57
RAD51B-208ENST00000479335 Q1T7F1 81 aa5.25□□□□□ -1.57
RAD51B-208ENST00000479335 V9GYY9 64 aa5.25□□□□□ -1.57
RAD51B-208ENST00000479335 A8MUN3 132 aa5.24□□□□□ -1.57
RAD51B-208ENST00000479335 SPINK7P58062 85 aa5.23□□□□□ -1.57
RAD51B-208ENST00000479335 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
RAD51B-208ENST00000479335 SEC61GP60059 68 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms