RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 SPACA4Q8TDM5 124 aa5.16□□□□□ -1.58
VPS45-208ENST00000478999 OCR1Q9BZK8 76 aa5.16□□□□□ -1.58
VPS45-208ENST00000478999 TNXBP22105 4242 aa5.15□□□□□ -1.58
VPS45-208ENST00000478999 CHTF8P0CG12 524 aa5.15□□□□□ -1.59
VPS45-208ENST00000478999 KRTAP13-1Q8IUC0 172 aa5.15□□□□□ -1.59
VPS45-208ENST00000478999 ZNF706Q9Y5V0 76 aaPredicted RBP5.15□□□□□ -1.59
VPS45-208ENST00000478999 FAM236DA0A1B0GTK5 79 aa5.14□□□□□ -1.59
VPS45-208ENST00000478999 H7BZZ5 65 aa5.14□□□□□ -1.59
VPS45-208ENST00000478999 FAM236CP0DP71 79 aa5.14□□□□□ -1.59
VPS45-208ENST00000478999 KRTAP19-1Q8IUB9 90 aa5.14□□□□□ -1.59
VPS45-208ENST00000478999 TMEM254Q8TBM7 123 aa5.14□□□□□ -1.59
VPS45-208ENST00000478999 CYSTM1Q9H1C7 97 aa5.14□□□□□ -1.59
VPS45-208ENST00000478999 DSCR10P59022 87 aa5.13□□□□□ -1.59
VPS45-208ENST00000478999 HCG22E2RYF7 251 aa5.11□□□□□ -1.59
VPS45-208ENST00000478999 LINC00483Q53H64 154 aa5.11□□□□□ -1.59
VPS45-208ENST00000478999 Q8N9L7 120 aa5.11□□□□□ -1.59
VPS45-208ENST00000478999 SERP1Q9Y6X1 66 aa5.11□□□□□ -1.59
VPS45-208ENST00000478999 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.11□□□□□ -1.59
VPS45-208ENST00000478999 A0A087WSZ3 146 aa5.1□□□□□ -1.59
VPS45-208ENST00000478999 A0A0U1RQV1 116 aa5.1□□□□□ -1.59
VPS45-208ENST00000478999 MT1HL1P0DM35 61 aa5.1□□□□□ -1.59
VPS45-208ENST00000478999 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
VPS45-208ENST00000478999 PLAC8Q9NZF1 115 aa5.1□□□□□ -1.59
VPS45-208ENST00000478999 K7EQZ3 153 aa5.09□□□□□ -1.59
VPS45-208ENST00000478999 C5orf47Q569G3 176 aa5.09□□□□□ -1.59
VPS45-208ENST00000478999 KRTAP11-1Q8IUC1 163 aa5.09□□□□□ -1.59
VPS45-208ENST00000478999 A8MWP4 228 aa5.08□□□□□ -1.6
VPS45-208ENST00000478999 SNURFQ9Y675 71 aa5.08□□□□□ -1.6
VPS45-208ENST00000478999 H3BPC8 53 aa5.07□□□□□ -1.6
VPS45-208ENST00000478999 PANO1I0J062 215 aa5.07□□□□□ -1.6
VPS45-208ENST00000478999 LINC00472Q9H8W2 130 aa5.07□□□□□ -1.6
VPS45-208ENST00000478999 PRR15Q8IV56 129 aa5.06□□□□□ -1.6
VPS45-208ENST00000478999 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
VPS45-208ENST00000478999 ZNF861PO60384 105 aa5.05□□□□□ -1.6
VPS45-208ENST00000478999 NDUFB1O75438 58 aa5.05□□□□□ -1.6
VPS45-208ENST00000478999 MP68P56378 58 aa5.04□□□□□ -1.6
VPS45-208ENST00000478999 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
VPS45-208ENST00000478999 ZCCHC13Q8WW36 166 aaKnown RBP5.03□□□□□ -1.6
VPS45-208ENST00000478999 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
VPS45-208ENST00000478999 PSORS1C2Q9UIG4 136 aa5.03□□□□□ -1.6
VPS45-208ENST00000478999 MOBPQ13875 183 aa5.02□□□□□ -1.61
VPS45-208ENST00000478999 CASC2Q6XLA1 102 aa5.02□□□□□ -1.61
VPS45-208ENST00000478999 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
VPS45-208ENST00000478999 CD164Q04900 197 aa5.01□□□□□ -1.61
VPS45-208ENST00000478999 A0A0G2JQZ4 141 aa5□□□□□ -1.61
VPS45-208ENST00000478999 IGLV9-49A0A0B4J1Y8 123 aa4.99□□□□□ -1.61
VPS45-208ENST00000478999 hDV103S1A0JD37 113 aa4.99□□□□□ -1.61
VPS45-208ENST00000478999 IGLV7-43P04211 117 aa4.99□□□□□ -1.61
VPS45-208ENST00000478999 WFDC13Q8IUB5 93 aa4.99□□□□□ -1.61
VPS45-208ENST00000478999 TP53AIP1Q9HCN2 124 aa4.99□□□□□ -1.61
VPS45-208ENST00000478999 LPAP08519 4548 aa4.99□□□□□ -1.61
VPS45-208ENST00000478999 ASB16-AS1Q495Z4 193 aa4.98□□□□□ -1.61
VPS45-208ENST00000478999 MMP24-AS1A0A0U1RRL7 71 aa4.97□□□□□ -1.61
VPS45-208ENST00000478999 SPINK6Q6UWN8 80 aa4.97□□□□□ -1.61
VPS45-208ENST00000478999 SSBP3-AS1Q7Z2R9 100 aa4.97□□□□□ -1.61
VPS45-208ENST00000478999 SPANXA2-OT1Q8N9U9 137 aa4.97□□□□□ -1.61
VPS45-208ENST00000478999 Q96NJ1 140 aa4.97□□□□□ -1.61
VPS45-208ENST00000478999 CYP4F30PQ9H0H9 118 aa4.97□□□□□ -1.61
VPS45-208ENST00000478999 DEFB116Q30KQ4 102 aa4.96□□□□□ -1.62
VPS45-208ENST00000478999 TRAV22A0A0B4J277 110 aa4.95□□□□□ -1.62
VPS45-208ENST00000478999 A0A1B0GVX0 72 aa4.95□□□□□ -1.62
VPS45-208ENST00000478999 H0Y9P7 68 aa4.95□□□□□ -1.62
VPS45-208ENST00000478999 FAM229BQ4G0N7 80 aa4.95□□□□□ -1.62
VPS45-208ENST00000478999 Q5XG85 94 aa4.95□□□□□ -1.62
VPS45-208ENST00000478999 C8orf17Q9NRJ1 99 aa4.94□□□□□ -1.62
VPS45-208ENST00000478999 LINC00208Q96KT6 92 aa4.92□□□□□ -1.62
VPS45-208ENST00000478999 C8orf87E5RJ46 101 aa4.91□□□□□ -1.62
VPS45-208ENST00000478999 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.63
VPS45-208ENST00000478999 MRPL34Q9BQ48 92 aaKnown RBP4.9□□□□□ -1.63
VPS45-208ENST00000478999 FP248Q71RG6 208 aaPredicted RBP4.89□□□□□ -1.63
VPS45-208ENST00000478999 MUC2Q02817 5179 aa4.88□□□□□ -1.63
VPS45-208ENST00000478999 V9GYY9 64 aa4.88□□□□□ -1.63
VPS45-208ENST00000478999 IGHV6-1A0A0B4J1U7 121 aa4.87□□□□□ -1.63
VPS45-208ENST00000478999 HRCT1Q6UXD1 115 aa4.87□□□□□ -1.63
VPS45-208ENST00000478999 LIMD2Q9BT23 127 aa4.87□□□□□ -1.63
VPS45-208ENST00000478999 KRTAP10-8P60410 259 aa4.86□□□□□ -1.63
VPS45-208ENST00000478999 C4orf26Q17RF5 130 aa4.86□□□□□ -1.63
VPS45-208ENST00000478999 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
VPS45-208ENST00000478999 LOC101927531A0A1B0GV80 90 aa4.85□□□□□ -1.63
VPS45-208ENST00000478999 Q1T7F1 81 aa4.85□□□□□ -1.63
VPS45-208ENST00000478999 ANAPC11Q9NYG5 84 aa4.85□□□□□ -1.63
VPS45-208ENST00000478999 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.63
VPS45-208ENST00000478999 C1orf195Q5TG92 126 aa4.84□□□□□ -1.63
VPS45-208ENST00000478999 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
VPS45-208ENST00000478999 PRR26Q8N8Z3 221 aa4.84□□□□□ -1.63
VPS45-208ENST00000478999 NDUFS5O43920 106 aa4.82□□□□□ -1.64
VPS45-208ENST00000478999 RPS29P62273 56 aaKnown RBP4.82□□□□□ -1.64
VPS45-208ENST00000478999 PRR4Q16378 134 aa4.8□□□□□ -1.64
VPS45-208ENST00000478999 KRTAP13-2Q52LG2 175 aa4.8□□□□□ -1.64
VPS45-208ENST00000478999 A0A087X002 238 aa4.79□□□□□ -1.64
VPS45-208ENST00000478999 SPINK1P00995 79 aa4.79□□□□□ -1.64
VPS45-208ENST00000478999 KRTAP1-4P0C5Y4 121 aa4.79□□□□□ -1.64
VPS45-208ENST00000478999 LINC00313P59037 77 aa4.79□□□□□ -1.64
VPS45-208ENST00000478999 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
VPS45-208ENST00000478999 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
VPS45-208ENST00000478999 KRTAP13-3Q3SY46 172 aa4.78□□□□□ -1.64
VPS45-208ENST00000478999 SPAG11AQ6PDA7 123 aa4.78□□□□□ -1.64
VPS45-208ENST00000478999 Q8N9P0 234 aaPredicted RBP4.78□□□□□ -1.64
VPS45-208ENST00000478999 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
VPS45-208ENST00000478999 NOTCH2NLQ7Z3S9 236 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms