RNA–Protein interactions for RNA: ENST00000478660.6

RUNX2-207, Transcript of runt related transcription factor 2, humanhuman

TSL 5

Gene RUNX2, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-207ENST00000478660 PLAC8Q9NZF1 115 aa13.79□□□□□ -0.2
RUNX2-207ENST00000478660 ZNF861PO60384 105 aa13.78□□□□□ -0.2
RUNX2-207ENST00000478660 SEC61GP60059 68 aa13.77□□□□□ -0.21
RUNX2-207ENST00000478660 CSMD3Q7Z407 3707 aa13.77□□□□□ -0.21
RUNX2-207ENST00000478660 A0A087X002 238 aa13.76□□□□□ -0.21
RUNX2-207ENST00000478660 LCA10Q71F78 164 aa13.76□□□□□ -0.21
RUNX2-207ENST00000478660 NOTCH2NLQ7Z3S9 236 aa13.76□□□□□ -0.21
RUNX2-207ENST00000478660 A6NED7 52 aa13.76□□□□□ -0.21
RUNX2-207ENST00000478660 HRES1P13985 223 aa13.75□□□□□ -0.21
RUNX2-207ENST00000478660 ANAPC11Q9NYG5 84 aa13.75□□□□□ -0.21
RUNX2-207ENST00000478660 RTL8CO15255 209 aa13.74□□□□□ -0.21
RUNX2-207ENST00000478660 SPAG11AQ6PDA7 123 aa13.72□□□□□ -0.21
RUNX2-207ENST00000478660 ATP11AUNQ6ZP68 121 aa13.72□□□□□ -0.21
RUNX2-207ENST00000478660 STARD9Q9P2P6 4700 aa13.7□□□□□ -0.22
RUNX2-207ENST00000478660 VPS13DQ5THJ4 4388 aa13.69□□□□□ -0.22
RUNX2-207ENST00000478660 CDC42SE1Q9NRR8 79 aa13.68□□□□□ -0.22
RUNX2-207ENST00000478660 DNAH8Q96JB1 4490 aa13.68□□□□□ -0.22
RUNX2-207ENST00000478660 KRTAP13-3Q3SY46 172 aa13.67□□□□□ -0.22
RUNX2-207ENST00000478660 SPTSSBQ8NFR3 76 aa13.65□□□□□ -0.22
RUNX2-207ENST00000478660 Q5W150 140 aa13.63□□□□□ -0.23
RUNX2-207ENST00000478660 SPINK6Q6UWN8 80 aa13.62□□□□□ -0.23
RUNX2-207ENST00000478660 HECTD4Q9Y4D8 3996 aa13.61□□□□□ -0.23
RUNX2-207ENST00000478660 LY6G6CO95867 125 aa13.61□□□□□ -0.23
RUNX2-207ENST00000478660 DNAH17Q9UFH2 4485 aa13.59□□□□□ -0.23
RUNX2-207ENST00000478660 IGLV7-43P04211 117 aa13.58□□□□□ -0.23
RUNX2-207ENST00000478660 KTN1-AS1Q86SY8 53 aa13.58□□□□□ -0.23
RUNX2-207ENST00000478660 C8orf87E5RJ46 101 aa13.56□□□□□ -0.24
RUNX2-207ENST00000478660 A6NN06 94 aa13.56□□□□□ -0.24
RUNX2-207ENST00000478660 ALMS1Q8TCU4 4167 aa13.55□□□□□ -0.24
RUNX2-207ENST00000478660 CIRBP-AS1Q8TBR5 109 aa13.55□□□□□ -0.24
RUNX2-207ENST00000478660 SSBP3-AS1Q7Z2R9 100 aa13.52□□□□□ -0.24
RUNX2-207ENST00000478660 SPINK7P58062 85 aa13.52□□□□□ -0.25
RUNX2-207ENST00000478660 FRAS1Q86XX4 4008 aa13.51□□□□□ -0.25
RUNX2-207ENST00000478660 ACYP2P14621 99 aa13.5□□□□□ -0.25
RUNX2-207ENST00000478660 PRR26Q8N8Z3 221 aa13.5□□□□□ -0.25
RUNX2-207ENST00000478660 DMAC1Q96GE9 116 aa13.43□□□□□ -0.26
RUNX2-207ENST00000478660 DNAH2Q9P225 4427 aa13.43□□□□□ -0.26
RUNX2-207ENST00000478660 C1orf134Q5TEV5 83 aa13.41□□□□□ -0.26
RUNX2-207ENST00000478660 FAM229AH3BQW9 127 aa13.4□□□□□ -0.26
RUNX2-207ENST00000478660 LINC00313P59037 77 aa13.4□□□□□ -0.26
RUNX2-207ENST00000478660 DNAH6Q9C0G6 4158 aa13.37□□□□□ -0.27
RUNX2-207ENST00000478660 IGKV2-30P06310 120 aa13.33□□□□□ -0.28
RUNX2-207ENST00000478660 C7orf65Q6ZTY9 151 aa13.33□□□□□ -0.28
RUNX2-207ENST00000478660 KMT2AQ03164 3969 aa13.32□□□□□ -0.28
RUNX2-207ENST00000478660 RBM12B-AS1Q9P1G2 102 aa13.29□□□□□ -0.28
RUNX2-207ENST00000478660 SACSQ9NZJ4 4579 aa13.28□□□□□ -0.28
RUNX2-207ENST00000478660 KRTAP13-2Q52LG2 175 aa13.27□□□□□ -0.28
RUNX2-207ENST00000478660 KMT2CQ8NEZ4 4911 aaKnown RBP13.26□□□□□ -0.29
RUNX2-207ENST00000478660 RETNLBQ9BQ08 111 aa13.25□□□□□ -0.29
RUNX2-207ENST00000478660 KRTAP16-1A8MUX0 517 aa13.25□□□□□ -0.29
RUNX2-207ENST00000478660 RYR2Q92736 4967 aa13.24□□□□□ -0.29
RUNX2-207ENST00000478660 HYDINQ4G0P3 5121 aa13.22□□□□□ -0.29
RUNX2-207ENST00000478660 A0A1B0GU69 56 aa13.2□□□□□ -0.3
RUNX2-207ENST00000478660 DNAH11Q96DT5 4516 aa13.2□□□□□ -0.3
RUNX2-207ENST00000478660 KRTAP10-2P60368 255 aa13.18□□□□□ -0.3
RUNX2-207ENST00000478660 DNAH5Q8TE73 4624 aa13.13□□□□□ -0.31
RUNX2-207ENST00000478660 SPATA8Q6RVD6 105 aa13.11□□□□□ -0.31
RUNX2-207ENST00000478660 Q6ZSA8 131 aa13.11□□□□□ -0.31
RUNX2-207ENST00000478660 KRTAP1-4P0C5Y4 121 aa13.08□□□□□ -0.32
RUNX2-207ENST00000478660 RYR3Q15413 4870 aa13.07□□□□□ -0.32
RUNX2-207ENST00000478660 IGKV2D-30A0A075B6S6 120 aa13.06□□□□□ -0.32
RUNX2-207ENST00000478660 KRTAP10-1P60331 282 aa13.03□□□□□ -0.32
RUNX2-207ENST00000478660 UQCR11O14957 56 aa13.01□□□□□ -0.33
RUNX2-207ENST00000478660 MIR22HGQ0VDD5 57 aa13□□□□□ -0.33
RUNX2-207ENST00000478660 A0A1B0GVY2 172 aa12.99□□□□□ -0.33
RUNX2-207ENST00000478660 PLA2G1BP04054 148 aaKnown RBP12.96□□□□□ -0.33
RUNX2-207ENST00000478660 C4orf48Q5BLP8 95 aa12.96□□□□□ -0.34
RUNX2-207ENST00000478660 LRP1BQ9NZR2 4599 aa12.96□□□□□ -0.34
RUNX2-207ENST00000478660 SPINK1P00995 79 aa12.92□□□□□ -0.34
RUNX2-207ENST00000478660 FAT2Q9NYQ8 4349 aa12.91□□□□□ -0.34
RUNX2-207ENST00000478660 TYMSOSQ8TAI1 123 aa12.9□□□□□ -0.34
RUNX2-207ENST00000478660 PKD1P98161 4303 aa12.89□□□□□ -0.35
RUNX2-207ENST00000478660 PRAC1Q96KF2 57 aa12.87□□□□□ -0.35
RUNX2-207ENST00000478660 ADM2Q7Z4H4 148 aa12.83□□□□□ -0.36
RUNX2-207ENST00000478660 RPS29P62273 56 aaKnown RBP12.78□□□□□ -0.36
RUNX2-207ENST00000478660 VPS13BQ7Z7G8 4022 aa12.77□□□□□ -0.36
RUNX2-207ENST00000478660 Q8N1X5 172 aa12.77□□□□□ -0.37
RUNX2-207ENST00000478660 LINC00304Q8N9R0 145 aa12.73□□□□□ -0.37
RUNX2-207ENST00000478660 PKHD1P08F94 4074 aa12.63□□□□□ -0.39
RUNX2-207ENST00000478660 EPPK1P58107 5090 aaKnown RBP12.61□□□□□ -0.39
RUNX2-207ENST00000478660 LINC01554Q52M75 96 aa12.6□□□□□ -0.39
RUNX2-207ENST00000478660 DYNC1H1Q14204 4646 aaKnown RBP12.6□□□□□ -0.39
RUNX2-207ENST00000478660 A8MUU9 505 aa12.59□□□□□ -0.39
RUNX2-207ENST00000478660 C20orf166-AS1Q96NR2 134 aa12.59□□□□□ -0.39
RUNX2-207ENST00000478660 H0YAA0 97 aa12.5□□□□□ -0.41
RUNX2-207ENST00000478660 C9orf92A6NGG3 77 aa12.5□□□□□ -0.41
RUNX2-207ENST00000478660 CSAG1Q6PB30 78 aa12.5□□□□□ -0.41
RUNX2-207ENST00000478660 KRTAP3-1Q9BYR8 98 aa12.5□□□□□ -0.41
RUNX2-207ENST00000478660 BIRC6Q9NR09 4857 aa12.45□□□□□ -0.42
RUNX2-207ENST00000478660 A0A1B0GU33 70 aa12.42□□□□□ -0.42
RUNX2-207ENST00000478660 APOBP04114 4563 aaKnown RBP12.41□□□□□ -0.42
RUNX2-207ENST00000478660 PKHD1L1Q86WI1 4243 aa12.4□□□□□ -0.42
RUNX2-207ENST00000478660 SMR3BP02814 79 aaPredicted RBP12.38□□□□□ -0.43
RUNX2-207ENST00000478660 H1FX-AS1Q4G0G2 97 aa12.38□□□□□ -0.43
RUNX2-207ENST00000478660 RYR1P21817 5038 aa12.33□□□□□ -0.44
RUNX2-207ENST00000478660 KRTAP10-4P60372 401 aaPredicted RBP12.31□□□□□ -0.44
RUNX2-207ENST00000478660 KIAA1109Q2LD37 5005 aa12.3□□□□□ -0.44
RUNX2-207ENST00000478660 Q5VSD8 79 aa12.29□□□□□ -0.44
RUNX2-207ENST00000478660 HSPG2P98160 4391 aa12.28□□□□□ -0.44
RUNX2-207ENST00000478660 COX6B2Q6YFQ2 88 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms