RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 TRAV22A0A0B4J277 110 aa2.63□□□□□ -1.99
GPNMB-210ENST00000478451 IGKV2-24A0A0C4DH68 120 aa2.63□□□□□ -1.99
GPNMB-210ENST00000478451 A8MWP4 228 aa2.63□□□□□ -1.99
GPNMB-210ENST00000478451 H0Y9P7 68 aa2.63□□□□□ -1.99
GPNMB-210ENST00000478451 C1orf195Q5TG92 126 aa2.63□□□□□ -1.99
GPNMB-210ENST00000478451 C1orf64Q8NEQ6 169 aa2.63□□□□□ -1.99
GPNMB-210ENST00000478451 TP53AIP1Q9HCN2 124 aa2.63□□□□□ -1.99
GPNMB-210ENST00000478451 ZNF706Q9Y5V0 76 aaPredicted RBP2.63□□□□□ -1.99
GPNMB-210ENST00000478451 MAST4O15021 2626 aa2.62□□□□□ -1.99
GPNMB-210ENST00000478451 PKD1L1Q8TDX9 2849 aa2.62□□□□□ -1.99
GPNMB-210ENST00000478451 DNAH1Q9P2D7 4330 aa2.62□□□□□ -1.99
GPNMB-210ENST00000478451 PRLHP81277 87 aa2.62□□□□□ -1.99
GPNMB-210ENST00000478451 MOBPQ13875 183 aa2.62□□□□□ -1.99
GPNMB-210ENST00000478451 CASC10Q5T4H9 136 aa2.62□□□□□ -1.99
GPNMB-210ENST00000478451 WFDC13Q8IUB5 93 aa2.62□□□□□ -1.99
GPNMB-210ENST00000478451 PRR15Q8IV56 129 aa2.62□□□□□ -1.99
GPNMB-210ENST00000478451 LINC00208Q96KT6 92 aa2.62□□□□□ -1.99
GPNMB-210ENST00000478451 TENM3Q9P273 2699 aa2.62□□□□□ -1.99
GPNMB-210ENST00000478451 FLNBO75369 2602 aaKnown RBP2.61□□□□□ -1.99
GPNMB-210ENST00000478451 FAM229BQ4G0N7 80 aa2.61□□□□□ -1.99
GPNMB-210ENST00000478451 LIMD2Q9BT23 127 aa2.61□□□□□ -1.99
GPNMB-210ENST00000478451 TRRAPQ9Y4A5 3859 aa2.6□□□□□ -1.99
GPNMB-210ENST00000478451 NUPR2A6NF83 97 aa2.6□□□□□ -1.99
GPNMB-210ENST00000478451 K7EIL1 84 aa2.6□□□□□ -1.99
GPNMB-210ENST00000478451 C9orf163Q8N9P6 203 aa2.6□□□□□ -1.99
GPNMB-210ENST00000478451 LINC00472Q9H8W2 130 aa2.6□□□□□ -1.99
GPNMB-210ENST00000478451 ANK2Q01484 3957 aa2.59□□□□□ -1.99
GPNMB-210ENST00000478451 A0A1W2PNN7 141 aa2.59□□□□□ -1.99
GPNMB-210ENST00000478451 PHF5AQ7RTV0 110 aaKnown RBP2.59□□□□□ -1.99
GPNMB-210ENST00000478451 APLNQ9ULZ1 77 aa2.59□□□□□ -1.99
GPNMB-210ENST00000478451 NBDYA0A0U1RRE5 68 aa2.58□□□□□ -2
GPNMB-210ENST00000478451 MMP24-AS1A0A0U1RRL7 71 aa2.58□□□□□ -2
GPNMB-210ENST00000478451 CHTF8P0CG12 524 aa2.58□□□□□ -2
GPNMB-210ENST00000478451 DEFB116Q30KQ4 102 aa2.58□□□□□ -2
GPNMB-210ENST00000478451 LINC00483Q53H64 154 aa2.57□□□□□ -2
GPNMB-210ENST00000478451 STAB1Q9NY15 2570 aa2.57□□□□□ -2
GPNMB-210ENST00000478451 NBEAL1Q6ZS30 2694 aa2.57□□□□□ -2
GPNMB-210ENST00000478451 DYNC2H1Q8NCM8 4307 aaKnown RBP2.56□□□□□ -2
GPNMB-210ENST00000478451 A0A1B0GVX0 72 aa2.56□□□□□ -2
GPNMB-210ENST00000478451 LRCOL1A6NCL2 159 aa2.56□□□□□ -2
GPNMB-210ENST00000478451 PSPHP1O15172 72 aa2.56□□□□□ -2
GPNMB-210ENST00000478451 KRTAP13-1Q8IUC0 172 aa2.56□□□□□ -2
GPNMB-210ENST00000478451 SPACA4Q8TDM5 124 aa2.56□□□□□ -2
GPNMB-210ENST00000478451 C8orf17Q9NRJ1 99 aa2.56□□□□□ -2
GPNMB-210ENST00000478451 TENM2Q9NT68 2774 aa2.56□□□□□ -2
GPNMB-210ENST00000478451 A0A0G2JQZ4 141 aa2.55□□□□□ -2
GPNMB-210ENST00000478451 LOC101927531A0A1B0GV80 90 aa2.55□□□□□ -2
GPNMB-210ENST00000478451 NDUFS5O43920 106 aa2.55□□□□□ -2
GPNMB-210ENST00000478451 F8P00451 2351 aa2.55□□□□□ -2
GPNMB-210ENST00000478451 PRB2P02812 416 aaPredicted RBP2.55□□□□□ -2
GPNMB-210ENST00000478451 KRTAP10-1P60331 282 aa2.55□□□□□ -2
GPNMB-210ENST00000478451 ASB16-AS1Q495Z4 193 aa2.55□□□□□ -2
GPNMB-210ENST00000478451 COA5Q86WW8 74 aa2.55□□□□□ -2
GPNMB-210ENST00000478451 KRTAP11-1Q8IUC1 163 aa2.55□□□□□ -2
GPNMB-210ENST00000478451 MRPL34Q9BQ48 92 aaKnown RBP2.55□□□□□ -2
GPNMB-210ENST00000478451 HUWE1Q7Z6Z7 4374 aaKnown RBP2.55□□□□□ -2
GPNMB-210ENST00000478451 A8MUN3 132 aa2.54□□□□□ -2
GPNMB-210ENST00000478451 C8orf87E5RJ46 101 aa2.54□□□□□ -2
GPNMB-210ENST00000478451 CHKB-CPT1BH3BT56 60 aa2.54□□□□□ -2
GPNMB-210ENST00000478451 CD164Q04900 197 aa2.54□□□□□ -2
GPNMB-210ENST00000478451 PMAIP1Q13794 54 aa2.54□□□□□ -2
GPNMB-210ENST00000478451 PRR15LQ9BU68 103 aa2.54□□□□□ -2
GPNMB-210ENST00000478451 NOTCH1P46531 2555 aa2.54□□□□□ -2
GPNMB-210ENST00000478451 IGHV6-1A0A0B4J1U7 121 aa2.53□□□□□ -2
GPNMB-210ENST00000478451 A6NED7 52 aa2.53□□□□□ -2
GPNMB-210ENST00000478451 ZNF861PO60384 105 aa2.53□□□□□ -2
GPNMB-210ENST00000478451 Q5VV11 94 aa2.53□□□□□ -2
GPNMB-210ENST00000478451 ATP11AUNQ6ZP68 121 aa2.53□□□□□ -2
GPNMB-210ENST00000478451 Q6ZRN7 208 aaPredicted RBP2.53□□□□□ -2
GPNMB-210ENST00000478451 Q96NJ1 140 aa2.53□□□□□ -2
GPNMB-210ENST00000478451 ANAPC11Q9NYG5 84 aa2.53□□□□□ -2
GPNMB-210ENST00000478451 A0A087WTM6 91 aa2.52□□□□□ -2.01
GPNMB-210ENST00000478451 RTL8CO15255 209 aa2.52□□□□□ -2.01
GPNMB-210ENST00000478451 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
GPNMB-210ENST00000478451 PLAC8Q9NZF1 115 aa2.52□□□□□ -2.01
GPNMB-210ENST00000478451 LINC01558Q9Y6Z2 57 aa2.52□□□□□ -2.01
GPNMB-210ENST00000478451 DNAH9Q9NYC9 4486 aa2.51□□□□□ -2.01
GPNMB-210ENST00000478451 PCOTHQ58A44 107 aa2.51□□□□□ -2.01
GPNMB-210ENST00000478451 SSBP3-AS1Q7Z2R9 100 aa2.51□□□□□ -2.01
GPNMB-210ENST00000478451 CDC42SE1Q9NRR8 79 aa2.51□□□□□ -2.01
GPNMB-210ENST00000478451 PSORS1C2Q9UIG4 136 aa2.51□□□□□ -2.01
GPNMB-210ENST00000478451 DNAH10Q8IVF4 4471 aa2.51□□□□□ -2.01
GPNMB-210ENST00000478451 COL7A1Q02388 2944 aa2.51□□□□□ -2.01
GPNMB-210ENST00000478451 COL6A5A8TX70 2615 aa2.5□□□□□ -2.01
GPNMB-210ENST00000478451 FBN1P35555 2871 aaKnown RBP2.5□□□□□ -2.01
GPNMB-210ENST00000478451 ACYP2P14621 99 aa2.5□□□□□ -2.01
GPNMB-210ENST00000478451 LYSTQ99698 3801 aa2.5□□□□□ -2.01
GPNMB-210ENST00000478451 STAB2Q8WWQ8 2551 aa2.5□□□□□ -2.01
GPNMB-210ENST00000478451 IGLV7-43P04211 117 aa2.49□□□□□ -2.01
GPNMB-210ENST00000478451 KTN1-AS1Q86SY8 53 aa2.49□□□□□ -2.01
GPNMB-210ENST00000478451 SRRM2Q9UQ35 2752 aaKnown RBP2.48□□□□□ -2.01
GPNMB-210ENST00000478451 PANO1I0J062 215 aa2.48□□□□□ -2.01
GPNMB-210ENST00000478451 HRES1P13985 223 aa2.48□□□□□ -2.01
GPNMB-210ENST00000478451 C1orf134Q5TEV5 83 aa2.48□□□□□ -2.01
GPNMB-210ENST00000478451 SPAG11AQ6PDA7 123 aa2.48□□□□□ -2.01
GPNMB-210ENST00000478451 SPTSSBQ8NFR3 76 aa2.48□□□□□ -2.01
GPNMB-210ENST00000478451 HECTD4Q9Y4D8 3996 aa2.47□□□□□ -2.01
GPNMB-210ENST00000478451 LINC00313P59037 77 aa2.47□□□□□ -2.01
GPNMB-210ENST00000478451 SPINK6Q6UWN8 80 aa2.47□□□□□ -2.01
GPNMB-210ENST00000478451 CIRBP-AS1Q8TBR5 109 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms