RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 SIGMAR1Q99720 223 aa2.59□□□□□ -1.99
ITGA4-209ENST00000478440 TTTY13Q9BZ97 58 aa2.59□□□□□ -1.99
ITGA4-209ENST00000478440 hADV29S1A0JD25 119 aa2.58□□□□□ -2
ITGA4-209ENST00000478440 SYS1-DBNDD2H3BUS1 97 aa2.58□□□□□ -2
ITGA4-209ENST00000478440 OCIAD2Q56VL3 154 aa2.58□□□□□ -2
ITGA4-209ENST00000478440 Q5W150 140 aa2.58□□□□□ -2
ITGA4-209ENST00000478440 SMIM11BQ8TCY0 68 aa2.58□□□□□ -2
ITGA4-209ENST00000478440 COLCA2A8K830 154 aa2.57□□□□□ -2
ITGA4-209ENST00000478440 H3BUT2 72 aa2.57□□□□□ -2
ITGA4-209ENST00000478440 SNCGO76070 127 aa2.57□□□□□ -2
ITGA4-209ENST00000478440 MT2AP02795 61 aa2.57□□□□□ -2
ITGA4-209ENST00000478440 C12orf57Q99622 126 aa2.57□□□□□ -2
ITGA4-209ENST00000478440 KRTDAPP60985 99 aa2.56□□□□□ -2
ITGA4-209ENST00000478440 LINC00575Q6W349 94 aa2.56□□□□□ -2
ITGA4-209ENST00000478440 MUSTN1Q8IVN3 82 aa2.56□□□□□ -2
ITGA4-209ENST00000478440 A8MUU9 505 aa2.55□□□□□ -2
ITGA4-209ENST00000478440 MT1FP04733 61 aa2.55□□□□□ -2
ITGA4-209ENST00000478440 LINC01545Q5VT33 79 aa2.55□□□□□ -2
ITGA4-209ENST00000478440 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.55□□□□□ -2
ITGA4-209ENST00000478440 YPEL4Q96NS1 127 aa2.55□□□□□ -2
ITGA4-209ENST00000478440 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
ITGA4-209ENST00000478440 A0A087WSZ3 146 aa2.54□□□□□ -2
ITGA4-209ENST00000478440 IGKV4-1P06312 121 aa2.54□□□□□ -2
ITGA4-209ENST00000478440 LINC00313P59037 77 aa2.54□□□□□ -2
ITGA4-209ENST00000478440 ATOH7Q8N100 152 aa2.54□□□□□ -2
ITGA4-209ENST00000478440 PPDPFLQ8WWR9 84 aa2.54□□□□□ -2
ITGA4-209ENST00000478440 FCGBPQ9Y6R7 5405 aaPredicted RBP2.53□□□□□ -2
ITGA4-209ENST00000478440 BVES-AS1Q5T3Y7 98 aa2.53□□□□□ -2
ITGA4-209ENST00000478440 TEN1Q86WV5 123 aa2.53□□□□□ -2
ITGA4-209ENST00000478440 HSBP1L1C9JCN9 74 aa2.52□□□□□ -2.01
ITGA4-209ENST00000478440 C3orf79P0CE67 100 aa2.52□□□□□ -2.01
ITGA4-209ENST00000478440 LYRM7Q5U5X0 104 aa2.52□□□□□ -2.01
ITGA4-209ENST00000478440 IGHV6-1A0A0B4J1U7 121 aa2.51□□□□□ -2.01
ITGA4-209ENST00000478440 FABP2P12104 132 aa2.51□□□□□ -2.01
ITGA4-209ENST00000478440 A0A1B0GV72 72 aa2.5□□□□□ -2.01
ITGA4-209ENST00000478440 A8MWP4 228 aa2.5□□□□□ -2.01
ITGA4-209ENST00000478440 H3BMG7 143 aa2.5□□□□□ -2.01
ITGA4-209ENST00000478440 USH2AO75445 5202 aa2.5□□□□□ -2.01
ITGA4-209ENST00000478440 SSPOA2VEC9 5147 aa2.5□□□□□ -2.01
ITGA4-209ENST00000478440 HIST1H2BKO60814 126 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 S100A6P06703 90 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HIST1H2BJP06899 126 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HRES1P13985 223 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HIST1H2BOP23527 126 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HIST1H2BBP33778 126 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HIST1H2BDP58876 126 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 SEC61GP60059 68 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HIST1H2BCP62807 126 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HIST2H2BEQ16778 126 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HIST1H2BHQ93079 126 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 RAB37Q96AX2 223 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HIST1H2BNQ99877 126 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 HIST1H2BMQ99879 126 aa2.49□□□□□ -2.01
ITGA4-209ENST00000478440 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
ITGA4-209ENST00000478440 DNAL4O96015 105 aa2.47□□□□□ -2.01
ITGA4-209ENST00000478440 TRACP01848 142 aa2.47□□□□□ -2.01
ITGA4-209ENST00000478440 WFDC13Q8IUB5 93 aa2.47□□□□□ -2.01
ITGA4-209ENST00000478440 ANKRD29Q8N6D5 301 aa2.47□□□□□ -2.01
ITGA4-209ENST00000478440 VPS25Q9BRG1 176 aa2.47□□□□□ -2.01
ITGA4-209ENST00000478440 H0YGX0 51 aa2.46□□□□□ -2.02
ITGA4-209ENST00000478440 SPINK7P58062 85 aa2.46□□□□□ -2.02
ITGA4-209ENST00000478440 C8orf87E5RJ46 101 aa2.45□□□□□ -2.02
ITGA4-209ENST00000478440 CCKP06307 115 aa2.45□□□□□ -2.02
ITGA4-209ENST00000478440 S100A2P29034 98 aa2.45□□□□□ -2.02
ITGA4-209ENST00000478440 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
ITGA4-209ENST00000478440 ZCCHC13Q8WW36 166 aaKnown RBP2.45□□□□□ -2.02
ITGA4-209ENST00000478440 DSCR8Q96T75 97 aa2.45□□□□□ -2.02
ITGA4-209ENST00000478440 A0A1W2PNM2 257 aa2.44□□□□□ -2.02
ITGA4-209ENST00000478440 PCP4L1A6NKN8 68 aa2.44□□□□□ -2.02
ITGA4-209ENST00000478440 TRBV7-4A0A0J9YYF1 115 aa2.43□□□□□ -2.02
ITGA4-209ENST00000478440 FAM236AA0A1B0GUQ0 79 aa2.43□□□□□ -2.02
ITGA4-209ENST00000478440 FAM236BA0A1B0GV22 79 aa2.43□□□□□ -2.02
ITGA4-209ENST00000478440 A0A1B0GVX0 72 aa2.43□□□□□ -2.02
ITGA4-209ENST00000478440 NDUFB1O75438 58 aa2.43□□□□□ -2.02
ITGA4-209ENST00000478440 PSMB2P49721 201 aa2.43□□□□□ -2.02
ITGA4-209ENST00000478440 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
ITGA4-209ENST00000478440 ORMDL1Q9P0S3 153 aa2.43□□□□□ -2.02
ITGA4-209ENST00000478440 SYNE2Q8WXH0 6885 aaKnown RBP2.43□□□□□ -2.02
ITGA4-209ENST00000478440 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
ITGA4-209ENST00000478440 A6NN06 94 aa2.42□□□□□ -2.02
ITGA4-209ENST00000478440 H3BQ85 93 aa2.42□□□□□ -2.02
ITGA4-209ENST00000478440 A0A1B0GX51 115 aa2.41□□□□□ -2.02
ITGA4-209ENST00000478440 A0A0B4J2C4 111 aa2.4□□□□□ -2.03
ITGA4-209ENST00000478440 J3KT08 172 aa2.4□□□□□ -2.03
ITGA4-209ENST00000478440 TMEM256-PLSCR3K7ERE1 68 aa2.4□□□□□ -2.03
ITGA4-209ENST00000478440 LINC00472Q9H8W2 130 aa2.4□□□□□ -2.03
ITGA4-209ENST00000478440 PRO1854Q9UHT4 67 aa2.4□□□□□ -2.03
ITGA4-209ENST00000478440 IGKV3D-7A0A0C4DH55 119 aa2.39□□□□□ -2.03
ITGA4-209ENST00000478440 NDUFS5O43920 106 aa2.39□□□□□ -2.03
ITGA4-209ENST00000478440 COX6CP09669 75 aa2.39□□□□□ -2.03
ITGA4-209ENST00000478440 COX8AP10176 69 aa2.39□□□□□ -2.03
ITGA4-209ENST00000478440 H1FX-AS1Q4G0G2 97 aa2.39□□□□□ -2.03
ITGA4-209ENST00000478440 IMUPQ9GZP8 106 aa2.39□□□□□ -2.03
ITGA4-209ENST00000478440 C14orf144Q96I85 54 aa2.38□□□□□ -2.03
ITGA4-209ENST00000478440 C9JAW5 83 aa2.37□□□□□ -2.03
ITGA4-209ENST00000478440 S100A1P23297 94 aa2.37□□□□□ -2.03
ITGA4-209ENST00000478440 RBM3P98179 157 aaKnown RBP2.37□□□□□ -2.03
ITGA4-209ENST00000478440 Q5VV11 94 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms