RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 RBM3P98179 157 aaKnown RBP5.62□□□□□ -1.51
HDAC6-222ENST00000478095 VPS25Q9BRG1 176 aa5.62□□□□□ -1.51
HDAC6-222ENST00000478095 TRBV7-4A0A0J9YYF1 115 aa5.61□□□□□ -1.51
HDAC6-222ENST00000478095 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
HDAC6-222ENST00000478095 DSCR8Q96T75 97 aa5.61□□□□□ -1.51
HDAC6-222ENST00000478095 MUC2Q02817 5179 aa5.6□□□□□ -1.51
HDAC6-222ENST00000478095 MTURNQ8N3F0 131 aa5.6□□□□□ -1.51
HDAC6-222ENST00000478095 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
HDAC6-222ENST00000478095 SEC61BP60468 96 aaKnown RBP5.58□□□□□ -1.52
HDAC6-222ENST00000478095 Q96NJ1 140 aa5.58□□□□□ -1.52
HDAC6-222ENST00000478095 JMJD7-PLA2G4BH0Y9G9 81 aa5.57□□□□□ -1.52
HDAC6-222ENST00000478095 SPCS1Q9Y6A9 102 aa5.57□□□□□ -1.52
HDAC6-222ENST00000478095 SIGMAR1Q99720 223 aa5.56□□□□□ -1.52
HDAC6-222ENST00000478095 C14orf132Q9NPU4 83 aa5.56□□□□□ -1.52
HDAC6-222ENST00000478095 DEFB116Q30KQ4 102 aa5.55□□□□□ -1.52
HDAC6-222ENST00000478095 OBSCN-AS1Q96MR7 158 aa5.55□□□□□ -1.52
HDAC6-222ENST00000478095 H3BT86 120 aa5.54□□□□□ -1.52
HDAC6-222ENST00000478095 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
HDAC6-222ENST00000478095 PCOTHQ58A44 107 aa5.54□□□□□ -1.52
HDAC6-222ENST00000478095 Q6ZQT0 140 aa5.54□□□□□ -1.52
HDAC6-222ENST00000478095 KRTAP4-1Q9BYQ7 146 aa5.54□□□□□ -1.52
HDAC6-222ENST00000478095 LOC110117498A0A087WWA1 95 aa5.53□□□□□ -1.52
HDAC6-222ENST00000478095 RPL37P61927 97 aaKnown RBP5.52□□□□□ -1.53
HDAC6-222ENST00000478095 LINC00472Q9H8W2 130 aa5.52□□□□□ -1.53
HDAC6-222ENST00000478095 DSCR10P59022 87 aa5.51□□□□□ -1.53
HDAC6-222ENST00000478095 K7EP34 96 aa5.5□□□□□ -1.53
HDAC6-222ENST00000478095 PDE6GP18545 87 aa5.5□□□□□ -1.53
HDAC6-222ENST00000478095 A0A0U1RQV1 116 aa5.49□□□□□ -1.53
HDAC6-222ENST00000478095 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
HDAC6-222ENST00000478095 IGHV6-1A0A0B4J1U7 121 aa5.47□□□□□ -1.53
HDAC6-222ENST00000478095 NOTCH2NLQ7Z3S9 236 aa5.47□□□□□ -1.53
HDAC6-222ENST00000478095 Q75L30 129 aa5.46□□□□□ -1.54
HDAC6-222ENST00000478095 PRO0461Q9UI25 63 aa5.46□□□□□ -1.54
HDAC6-222ENST00000478095 LINC00313P59037 77 aa5.45□□□□□ -1.54
HDAC6-222ENST00000478095 A0A1B0GVX0 72 aa5.44□□□□□ -1.54
HDAC6-222ENST00000478095 A0A1B0GW54 56 aa5.44□□□□□ -1.54
HDAC6-222ENST00000478095 J3KT08 172 aa5.44□□□□□ -1.54
HDAC6-222ENST00000478095 ATP11AUNQ6ZP68 121 aa5.44□□□□□ -1.54
HDAC6-222ENST00000478095 GTF2H5Q6ZYL4 71 aa5.44□□□□□ -1.54
HDAC6-222ENST00000478095 C20orf166-AS1Q96NR2 134 aa5.44□□□□□ -1.54
HDAC6-222ENST00000478095 A8MUU9 505 aa5.43□□□□□ -1.54
HDAC6-222ENST00000478095 KRTAP16-1A8MUX0 517 aa5.43□□□□□ -1.54
HDAC6-222ENST00000478095 NREPQ16612 68 aa5.43□□□□□ -1.54
HDAC6-222ENST00000478095 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
HDAC6-222ENST00000478095 A8MWP4 228 aa5.4□□□□□ -1.54
HDAC6-222ENST00000478095 C8orf87E5RJ46 101 aa5.4□□□□□ -1.54
HDAC6-222ENST00000478095 IGKV3D-7A0A0C4DH55 119 aa5.39□□□□□ -1.55
HDAC6-222ENST00000478095 NDUFB1O75438 58 aa5.39□□□□□ -1.55
HDAC6-222ENST00000478095 F8W1H4 67 aa5.37□□□□□ -1.55
HDAC6-222ENST00000478095 Q6ZVQ6 151 aa5.37□□□□□ -1.55
HDAC6-222ENST00000478095 C8orf17Q9NRJ1 99 aa5.37□□□□□ -1.55
HDAC6-222ENST00000478095 KRTAP19-2Q3LHN2 52 aa5.36□□□□□ -1.55
HDAC6-222ENST00000478095 ETDBQ3ZM63 59 aa5.36□□□□□ -1.55
HDAC6-222ENST00000478095 K7EQZ3 153 aa5.35□□□□□ -1.55
HDAC6-222ENST00000478095 BPY2O14599 106 aa5.35□□□□□ -1.55
HDAC6-222ENST00000478095 PRR15Q8IV56 129 aa5.35□□□□□ -1.55
HDAC6-222ENST00000478095 LINC00846Q9NV44 126 aa5.34□□□□□ -1.55
HDAC6-222ENST00000478095 MMP24-AS1A0A0U1RRL7 71 aa5.32□□□□□ -1.56
HDAC6-222ENST00000478095 Q8N9L7 120 aa5.32□□□□□ -1.56
HDAC6-222ENST00000478095 UBL5Q9BZL1 73 aa5.32□□□□□ -1.56
HDAC6-222ENST00000478095 COX6B2Q6YFQ2 88 aa5.31□□□□□ -1.56
HDAC6-222ENST00000478095 Q8N9P0 234 aaPredicted RBP5.31□□□□□ -1.56
HDAC6-222ENST00000478095 A0A1B0GV90 55 aa5.3□□□□□ -1.56
HDAC6-222ENST00000478095 ZCCHC13Q8WW36 166 aaKnown RBP5.29□□□□□ -1.56
HDAC6-222ENST00000478095 hDV103S1A0JD37 113 aa5.28□□□□□ -1.56
HDAC6-222ENST00000478095 MT1HP80294 61 aa5.28□□□□□ -1.56
HDAC6-222ENST00000478095 TMEM254Q8TBM7 123 aa5.28□□□□□ -1.56
HDAC6-222ENST00000478095 MRPL34Q9BQ48 92 aaKnown RBP5.28□□□□□ -1.56
HDAC6-222ENST00000478095 WFDC13Q8IUB5 93 aa5.27□□□□□ -1.57
HDAC6-222ENST00000478095 NDUFS5O43920 106 aa5.26□□□□□ -1.57
HDAC6-222ENST00000478095 CASC2Q6XLA1 102 aa5.24□□□□□ -1.57
HDAC6-222ENST00000478095 HRES1P13985 223 aa5.22□□□□□ -1.57
HDAC6-222ENST00000478095 SPINK7P58062 85 aa5.21□□□□□ -1.58
HDAC6-222ENST00000478095 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
HDAC6-222ENST00000478095 M0R2T5 61 aa5.2□□□□□ -1.58
HDAC6-222ENST00000478095 FAM236DA0A1B0GTK5 79 aa5.19□□□□□ -1.58
HDAC6-222ENST00000478095 ACYP1P07311 99 aa5.19□□□□□ -1.58
HDAC6-222ENST00000478095 FAM236CP0DP71 79 aa5.19□□□□□ -1.58
HDAC6-222ENST00000478095 CXCL6P80162 114 aa5.19□□□□□ -1.58
HDAC6-222ENST00000478095 FAM240AA0A1B0GVK7 77 aa5.18□□□□□ -1.58
HDAC6-222ENST00000478095 MPLKIPQ8TAP9 179 aa5.18□□□□□ -1.58
HDAC6-222ENST00000478095 RBM12B-AS1Q9P1G2 102 aa5.18□□□□□ -1.58
HDAC6-222ENST00000478095 Q5W150 140 aa5.17□□□□□ -1.58
HDAC6-222ENST00000478095 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
HDAC6-222ENST00000478095 FLGP20930 4061 aaPredicted RBP5.15□□□□□ -1.58
HDAC6-222ENST00000478095 IGKV2D-30A0A075B6S6 120 aa5.14□□□□□ -1.59
HDAC6-222ENST00000478095 IGKV2-30P06310 120 aa5.14□□□□□ -1.59
HDAC6-222ENST00000478095 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
HDAC6-222ENST00000478095 ATP5EP2Q5VTU8 51 aa5.12□□□□□ -1.59
HDAC6-222ENST00000478095 HIST1H4AP62805 103 aaKnown RBP5.11□□□□□ -1.59
HDAC6-222ENST00000478095 C7orf65Q6ZTY9 151 aa5.1□□□□□ -1.59
HDAC6-222ENST00000478095 LINC00643Q86TS7 51 aa5.09□□□□□ -1.59
HDAC6-222ENST00000478095 A0A087WVE0 104 aa5.07□□□□□ -1.6
HDAC6-222ENST00000478095 TP53AIP1Q9HCN2 124 aa5.07□□□□□ -1.6
HDAC6-222ENST00000478095 J3QR89 54 aa5.06□□□□□ -1.6
HDAC6-222ENST00000478095 C4orf26Q17RF5 130 aa5.03□□□□□ -1.6
HDAC6-222ENST00000478095 TRAV22A0A0B4J277 110 aa5□□□□□ -1.61
HDAC6-222ENST00000478095 H1FX-AS1Q4G0G2 97 aa5□□□□□ -1.61
HDAC6-222ENST00000478095 KRTAP9-8Q9BYQ0 159 aa5□□□□□ -1.61
HDAC6-222ENST00000478095 UQCRQO14949 82 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms