RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 C18orf32Q8TCD1 76 aa2.39□□□□□ -2.03
CKS1B-207ENST00000477676 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
CKS1B-207ENST00000477676 LOC107984156A0A0G2JMH3 177 aa2.38□□□□□ -2.03
CKS1B-207ENST00000477676 H3BMG7 143 aa2.38□□□□□ -2.03
CKS1B-207ENST00000477676 TAX1BP3O14907 124 aa2.38□□□□□ -2.03
CKS1B-207ENST00000477676 IGLV6-57P01721 117 aa2.38□□□□□ -2.03
CKS1B-207ENST00000477676 HBDP02042 147 aa2.38□□□□□ -2.03
CKS1B-207ENST00000477676 FABP2P12104 132 aa2.38□□□□□ -2.03
CKS1B-207ENST00000477676 C9orf153Q5TBE3 101 aa2.38□□□□□ -2.03
CKS1B-207ENST00000477676 LCA10Q71F78 164 aa2.38□□□□□ -2.03
CKS1B-207ENST00000477676 ARL17AQ8IVW1 177 aa2.38□□□□□ -2.03
CKS1B-207ENST00000477676 BRK1Q8WUW1 75 aa2.38□□□□□ -2.03
CKS1B-207ENST00000477676 A0A0G2JQZ4 141 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 CCDC179H3BU77 68 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 K7EP34 96 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 LST1O00453 97 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 TRACP01848 142 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H2BOP23527 126 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H2BBP33778 126 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H2BDP58876 126 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 RPL37P61927 97 aaKnown RBP2.37□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H2BCP62807 126 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 HIST2H2BEQ16778 126 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.37□□□□□ -2.03
CKS1B-207ENST00000477676 SFTA2Q6UW10 78 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 SOSTDC1Q6X4U4 206 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H2BHQ93079 126 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H2BNQ99877 126 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H2BMQ99879 126 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H2BLQ99880 126 aa2.37□□□□□ -2.03
CKS1B-207ENST00000477676 TRBV10-2A0A0K0K1G8 114 aa2.36□□□□□ -2.03
CKS1B-207ENST00000477676 A8MUN3 132 aa2.36□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H2BKO60814 126 aa2.36□□□□□ -2.03
CKS1B-207ENST00000477676 SNCGO76070 127 aa2.36□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H2BJP06899 126 aa2.36□□□□□ -2.03
CKS1B-207ENST00000477676 SPRR1BP22528 89 aa2.36□□□□□ -2.03
CKS1B-207ENST00000477676 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
CKS1B-207ENST00000477676 COX6B2Q6YFQ2 88 aa2.36□□□□□ -2.03
CKS1B-207ENST00000477676 TEN1Q86WV5 123 aa2.36□□□□□ -2.03
CKS1B-207ENST00000477676 SERP1Q9Y6X1 66 aa2.36□□□□□ -2.03
CKS1B-207ENST00000477676 TRBV20-1A0A075B6N2 111 aa2.35□□□□□ -2.03
CKS1B-207ENST00000477676 TRAV12-1A0A0B4J245 112 aa2.35□□□□□ -2.03
CKS1B-207ENST00000477676 FAM236AA0A1B0GUQ0 79 aa2.35□□□□□ -2.03
CKS1B-207ENST00000477676 FAM236BA0A1B0GV22 79 aa2.35□□□□□ -2.03
CKS1B-207ENST00000477676 H7C2G1 150 aa2.35□□□□□ -2.03
CKS1B-207ENST00000477676 ZNF73O43830 326 aaPredicted RBP2.35□□□□□ -2.03
CKS1B-207ENST00000477676 HIST1H4AP62805 103 aaKnown RBP2.35□□□□□ -2.03
CKS1B-207ENST00000477676 TRAV23DV6A0A075B6W5 121 aa2.34□□□□□ -2.03
CKS1B-207ENST00000477676 H3BT86 120 aa2.34□□□□□ -2.03
CKS1B-207ENST00000477676 MT2AP02795 61 aa2.34□□□□□ -2.03
CKS1B-207ENST00000477676 NMUP48645 174 aa2.34□□□□□ -2.03
CKS1B-207ENST00000477676 NPC2P61916 151 aa2.34□□□□□ -2.03
CKS1B-207ENST00000477676 IFI27L1Q96BM0 104 aa2.34□□□□□ -2.03
CKS1B-207ENST00000477676 LIMD2Q9BT23 127 aa2.34□□□□□ -2.03
CKS1B-207ENST00000477676 SYNE2Q8WXH0 6885 aaKnown RBP2.33□□□□□ -2.04
CKS1B-207ENST00000477676 MYMXA0A1B0GTQ4 84 aa2.33□□□□□ -2.04
CKS1B-207ENST00000477676 LEPROTO15243 131 aa2.33□□□□□ -2.04
CKS1B-207ENST00000477676 MT1FP04733 61 aa2.33□□□□□ -2.04
CKS1B-207ENST00000477676 PMCHL2Q9BQD1 86 aa2.33□□□□□ -2.04
CKS1B-207ENST00000477676 NAA38Q9BRA0 125 aaKnown RBP2.33□□□□□ -2.04
CKS1B-207ENST00000477676 TMEM256-PLSCR3K7ERE1 68 aa2.32□□□□□ -2.04
CKS1B-207ENST00000477676 COX7CP15954 63 aa2.32□□□□□ -2.04
CKS1B-207ENST00000477676 LINC00313P59037 77 aa2.32□□□□□ -2.04
CKS1B-207ENST00000477676 S100A7L2Q5SY68 101 aa2.32□□□□□ -2.04
CKS1B-207ENST00000477676 CEND1Q8N111 149 aa2.32□□□□□ -2.04
CKS1B-207ENST00000477676 TRAPPC1Q9Y5R8 145 aa2.32□□□□□ -2.04
CKS1B-207ENST00000477676 ATOX1O00244 68 aa2.31□□□□□ -2.04
CKS1B-207ENST00000477676 KRTDAPP60985 99 aa2.31□□□□□ -2.04
CKS1B-207ENST00000477676 MT-ATP8P03928 68 aa2.3□□□□□ -2.04
CKS1B-207ENST00000477676 ELOF1P60002 83 aaKnown RBP2.3□□□□□ -2.04
CKS1B-207ENST00000477676 LINC01554Q52M75 96 aa2.3□□□□□ -2.04
CKS1B-207ENST00000477676 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
CKS1B-207ENST00000477676 PCP2Q8IVA1 136 aa2.3□□□□□ -2.04
CKS1B-207ENST00000477676 DEFB105AQ8NG35 78 aa2.3□□□□□ -2.04
CKS1B-207ENST00000477676 PPDPFLQ8WWR9 84 aa2.3□□□□□ -2.04
CKS1B-207ENST00000477676 CHCHD1Q96BP2 118 aaKnown RBP2.3□□□□□ -2.04
CKS1B-207ENST00000477676 IGLV5-48A0A075B6I7 105 aa2.29□□□□□ -2.04
CKS1B-207ENST00000477676 TRBV7-7A0A0K0K1E9 115 aa2.29□□□□□ -2.04
CKS1B-207ENST00000477676 LINC00308Q8TCZ7 52 aa2.29□□□□□ -2.04
CKS1B-207ENST00000477676 SPCS1Q9Y6A9 102 aa2.29□□□□□ -2.04
CKS1B-207ENST00000477676 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
CKS1B-207ENST00000477676 TEX49A0A1B0GTD5 131 aa2.28□□□□□ -2.04
CKS1B-207ENST00000477676 A0A1W2PPM0 123 aa2.28□□□□□ -2.04
CKS1B-207ENST00000477676 TCL1BO95988 128 aa2.28□□□□□ -2.04
CKS1B-207ENST00000477676 COX7BP24311 80 aa2.28□□□□□ -2.04
CKS1B-207ENST00000477676 HINT1P49773 126 aaPredicted RBP2.28□□□□□ -2.04
CKS1B-207ENST00000477676 KRTAP19-6Q3LI70 58 aa2.28□□□□□ -2.04
CKS1B-207ENST00000477676 OBSCN-AS1Q96MR7 158 aa2.28□□□□□ -2.04
CKS1B-207ENST00000477676 NHP2Q9NX24 153 aaKnown RBP2.28□□□□□ -2.04
CKS1B-207ENST00000477676 K7ERS5 55 aa2.27□□□□□ -2.05
CKS1B-207ENST00000477676 NDUFC1O43677 76 aa2.27□□□□□ -2.05
CKS1B-207ENST00000477676 SPATA45Q537H7 98 aa2.27□□□□□ -2.05
CKS1B-207ENST00000477676 BVES-AS1Q5T3Y7 98 aa2.27□□□□□ -2.05
CKS1B-207ENST00000477676 ATP11AUNQ6ZP68 121 aa2.27□□□□□ -2.05
CKS1B-207ENST00000477676 TTTY13Q9BZ97 58 aa2.27□□□□□ -2.05
CKS1B-207ENST00000477676 LEPROTL1O95214 131 aa2.26□□□□□ -2.05
CKS1B-207ENST00000477676 IGKCP01834 107 aa2.26□□□□□ -2.05
CKS1B-207ENST00000477676 ACYP1P07311 99 aa2.26□□□□□ -2.05
CKS1B-207ENST00000477676 PLNP26678 52 aa2.26□□□□□ -2.05
CKS1B-207ENST00000477676 KRTAP10-10P60014 251 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms