RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 IGKV4-1P06312 121 aa8.13□□□□□ -1.11
CLDN11-204ENST00000477531 LINC00313P59037 77 aa8.13□□□□□ -1.11
CLDN11-204ENST00000477531 CCKP06307 115 aa8.11□□□□□ -1.11
CLDN11-204ENST00000477531 JMJD7-PLA2G4BH0Y9G9 81 aa8.1□□□□□ -1.11
CLDN11-204ENST00000477531 RBM3P98179 157 aaKnown RBP8.1□□□□□ -1.11
CLDN11-204ENST00000477531 FSIP2Q5CZC0 6907 aa8.1□□□□□ -1.11
CLDN11-204ENST00000477531 DSCR8Q96T75 97 aa8.08□□□□□ -1.12
CLDN11-204ENST00000477531 MTURNQ8N3F0 131 aa8.07□□□□□ -1.12
CLDN11-204ENST00000477531 DEFB116Q30KQ4 102 aa8.06□□□□□ -1.12
CLDN11-204ENST00000477531 VPS25Q9BRG1 176 aa8.06□□□□□ -1.12
CLDN11-204ENST00000477531 LINC00472Q9H8W2 130 aa8.05□□□□□ -1.12
CLDN11-204ENST00000477531 C21orf62-AS1Q17RA5 79 aa8.04□□□□□ -1.12
CLDN11-204ENST00000477531 IGHV6-1A0A0B4J1U7 121 aa8.03□□□□□ -1.12
CLDN11-204ENST00000477531 PDE6GP18545 87 aa8.03□□□□□ -1.12
CLDN11-204ENST00000477531 PRO0461Q9UI25 63 aa8.03□□□□□ -1.12
CLDN11-204ENST00000477531 LOC110117498A0A087WWA1 95 aa8.01□□□□□ -1.13
CLDN11-204ENST00000477531 FAM236DA0A1B0GTK5 79 aa8.01□□□□□ -1.13
CLDN11-204ENST00000477531 KRTAP16-1A8MUX0 517 aa8.01□□□□□ -1.13
CLDN11-204ENST00000477531 F8W1H4 67 aa8.01□□□□□ -1.13
CLDN11-204ENST00000477531 FAM236CP0DP71 79 aa8.01□□□□□ -1.13
CLDN11-204ENST00000477531 SMCPP49901 116 aaPredicted RBP8□□□□□ -1.13
CLDN11-204ENST00000477531 NOTCH2NLQ7Z3S9 236 aa8□□□□□ -1.13
CLDN11-204ENST00000477531 C8orf87E5RJ46 101 aa7.99□□□□□ -1.13
CLDN11-204ENST00000477531 C14orf132Q9NPU4 83 aa7.99□□□□□ -1.13
CLDN11-204ENST00000477531 Q6ZQT0 140 aa7.98□□□□□ -1.13
CLDN11-204ENST00000477531 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
CLDN11-204ENST00000477531 A0A1B0GV90 55 aa7.97□□□□□ -1.13
CLDN11-204ENST00000477531 A0A1B0GW54 56 aa7.97□□□□□ -1.13
CLDN11-204ENST00000477531 A0A1B0GVX0 72 aa7.96□□□□□ -1.14
CLDN11-204ENST00000477531 J3KT08 172 aa7.96□□□□□ -1.14
CLDN11-204ENST00000477531 NDUFB1O75438 58 aa7.92□□□□□ -1.14
CLDN11-204ENST00000477531 ETDBQ3ZM63 59 aa7.9□□□□□ -1.14
CLDN11-204ENST00000477531 HRES1P13985 223 aa7.89□□□□□ -1.15
CLDN11-204ENST00000477531 KRTAP9-8Q9BYQ0 159 aa7.88□□□□□ -1.15
CLDN11-204ENST00000477531 ZCCHC13Q8WW36 166 aaKnown RBP7.87□□□□□ -1.15
CLDN11-204ENST00000477531 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
CLDN11-204ENST00000477531 A8MWP4 228 aa7.83□□□□□ -1.16
CLDN11-204ENST00000477531 SPINK7P58062 85 aa7.81□□□□□ -1.16
CLDN11-204ENST00000477531 NREPQ16612 68 aa7.81□□□□□ -1.16
CLDN11-204ENST00000477531 Q8N9P0 234 aaPredicted RBP7.81□□□□□ -1.16
CLDN11-204ENST00000477531 C8orf17Q9NRJ1 99 aa7.81□□□□□ -1.16
CLDN11-204ENST00000477531 IGKV3D-7A0A0C4DH55 119 aa7.77□□□□□ -1.17
CLDN11-204ENST00000477531 MT2AP02795 61 aa7.76□□□□□ -1.17
CLDN11-204ENST00000477531 Q6ZVQ6 151 aa7.76□□□□□ -1.17
CLDN11-204ENST00000477531 UBL5Q9BZL1 73 aa7.76□□□□□ -1.17
CLDN11-204ENST00000477531 ACYP1P07311 99 aa7.75□□□□□ -1.17
CLDN11-204ENST00000477531 KRTAP10-10P60014 251 aa7.74□□□□□ -1.17
CLDN11-204ENST00000477531 PRR15Q8IV56 129 aa7.74□□□□□ -1.17
CLDN11-204ENST00000477531 LINC00846Q9NV44 126 aa7.74□□□□□ -1.17
CLDN11-204ENST00000477531 FAM240AA0A1B0GVK7 77 aa7.73□□□□□ -1.17
CLDN11-204ENST00000477531 BPY2O14599 106 aa7.71□□□□□ -1.18
CLDN11-204ENST00000477531 WFDC13Q8IUB5 93 aa7.71□□□□□ -1.18
CLDN11-204ENST00000477531 J3QR89 54 aa7.7□□□□□ -1.18
CLDN11-204ENST00000477531 MT1FP04733 61 aa7.69□□□□□ -1.18
CLDN11-204ENST00000477531 TMEM254Q8TBM7 123 aa7.69□□□□□ -1.18
CLDN11-204ENST00000477531 MRPL34Q9BQ48 92 aaKnown RBP7.69□□□□□ -1.18
CLDN11-204ENST00000477531 USH2AO75445 5202 aa7.68□□□□□ -1.18
CLDN11-204ENST00000477531 NDUFS5O43920 106 aa7.66□□□□□ -1.18
CLDN11-204ENST00000477531 MMP24-AS1A0A0U1RRL7 71 aa7.65□□□□□ -1.18
CLDN11-204ENST00000477531 hDV103S1A0JD37 113 aa7.65□□□□□ -1.18
CLDN11-204ENST00000477531 KRTAP9-3Q9BYQ3 159 aa7.63□□□□□ -1.19
CLDN11-204ENST00000477531 SSPOA2VEC9 5147 aa7.62□□□□□ -1.19
CLDN11-204ENST00000477531 K7EQZ3 153 aa7.62□□□□□ -1.19
CLDN11-204ENST00000477531 CXCL6P80162 114 aa7.62□□□□□ -1.19
CLDN11-204ENST00000477531 LCE2BO14633 110 aa7.6□□□□□ -1.19
CLDN11-204ENST00000477531 ATP5EP2Q5VTU8 51 aa7.6□□□□□ -1.19
CLDN11-204ENST00000477531 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.58□□□□□ -1.2
CLDN11-204ENST00000477531 K7ERU9 68 aa7.57□□□□□ -1.2
CLDN11-204ENST00000477531 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
CLDN11-204ENST00000477531 LINC00643Q86TS7 51 aa7.56□□□□□ -1.2
CLDN11-204ENST00000477531 Q8N9L7 120 aa7.56□□□□□ -1.2
CLDN11-204ENST00000477531 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
CLDN11-204ENST00000477531 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
CLDN11-204ENST00000477531 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
CLDN11-204ENST00000477531 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
CLDN11-204ENST00000477531 KRTAP9-7A8MTY7 169 aa7.52□□□□□ -1.21
CLDN11-204ENST00000477531 CASC2Q6XLA1 102 aa7.52□□□□□ -1.21
CLDN11-204ENST00000477531 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
CLDN11-204ENST00000477531 Q5W150 140 aa7.49□□□□□ -1.21
CLDN11-204ENST00000477531 FCGBPQ9Y6R7 5405 aaPredicted RBP7.49□□□□□ -1.21
CLDN11-204ENST00000477531 HIST1H4AP62805 103 aaKnown RBP7.46□□□□□ -1.22
CLDN11-204ENST00000477531 C4orf26Q17RF5 130 aa7.4□□□□□ -1.22
CLDN11-204ENST00000477531 KRTAP19-6Q3LI70 58 aa7.38□□□□□ -1.23
CLDN11-204ENST00000477531 TP53AIP1Q9HCN2 124 aa7.37□□□□□ -1.23
CLDN11-204ENST00000477531 A0A087WVE0 104 aa7.36□□□□□ -1.23
CLDN11-204ENST00000477531 IMUPQ9GZP8 106 aa7.36□□□□□ -1.23
CLDN11-204ENST00000477531 MT-ATP8P03928 68 aa7.31□□□□□ -1.24
CLDN11-204ENST00000477531 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
CLDN11-204ENST00000477531 FAM236AA0A1B0GUQ0 79 aa7.28□□□□□ -1.24
CLDN11-204ENST00000477531 FAM236BA0A1B0GV22 79 aa7.28□□□□□ -1.24
CLDN11-204ENST00000477531 S4R3F8 94 aa7.28□□□□□ -1.24
CLDN11-204ENST00000477531 C1orf64Q8NEQ6 169 aa7.27□□□□□ -1.25
CLDN11-204ENST00000477531 UQCRQO14949 82 aa7.25□□□□□ -1.25
CLDN11-204ENST00000477531 CSAG1Q6PB30 78 aa7.25□□□□□ -1.25
CLDN11-204ENST00000477531 MACF1Q9UPN3 7388 aaKnown RBP7.24□□□□□ -1.25
CLDN11-204ENST00000477531 TRAV22A0A0B4J277 110 aa7.24□□□□□ -1.25
CLDN11-204ENST00000477531 SCGB1A1P11684 91 aa7.24□□□□□ -1.25
CLDN11-204ENST00000477531 KRTAP3-1Q9BYR8 98 aa7.23□□□□□ -1.25
CLDN11-204ENST00000477531 ATOX1O00244 68 aa7.2□□□□□ -1.26
CLDN11-204ENST00000477531 OCR1Q9BZK8 76 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms