RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TRACP01848 142 aa3.21□□□□□ -1.9
RTFDC1-206ENST00000477485 S100A2P29034 98 aa3.21□□□□□ -1.9
RTFDC1-206ENST00000477485 SPINK7P58062 85 aa3.21□□□□□ -1.9
RTFDC1-206ENST00000477485 LYRM7Q5U5X0 104 aa3.21□□□□□ -1.9
RTFDC1-206ENST00000477485 VPS25Q9BRG1 176 aa3.21□□□□□ -1.9
RTFDC1-206ENST00000477485 DNAL4O96015 105 aa3.2□□□□□ -1.9
RTFDC1-206ENST00000477485 WFDC13Q8IUB5 93 aa3.2□□□□□ -1.9
RTFDC1-206ENST00000477485 ZCCHC13Q8WW36 166 aaKnown RBP3.2□□□□□ -1.9
RTFDC1-206ENST00000477485 TRBV7-4A0A0J9YYF1 115 aa3.19□□□□□ -1.9
RTFDC1-206ENST00000477485 C8orf87E5RJ46 101 aa3.19□□□□□ -1.9
RTFDC1-206ENST00000477485 CCKP06307 115 aa3.19□□□□□ -1.9
RTFDC1-206ENST00000477485 A0A1B0GVX0 72 aa3.18□□□□□ -1.9
RTFDC1-206ENST00000477485 LINC00472Q9H8W2 130 aa3.18□□□□□ -1.9
RTFDC1-206ENST00000477485 A0A0B4J2C4 111 aa3.17□□□□□ -1.9
RTFDC1-206ENST00000477485 A0A1B0GX51 115 aa3.17□□□□□ -1.9
RTFDC1-206ENST00000477485 HIST1H2BLQ99880 126 aa3.17□□□□□ -1.9
RTFDC1-206ENST00000477485 ORMDL1Q9P0S3 153 aa3.17□□□□□ -1.9
RTFDC1-206ENST00000477485 COX8AP10176 69 aa3.16□□□□□ -1.9
RTFDC1-206ENST00000477485 HIST3H2BBQ8N257 126 aa3.16□□□□□ -1.9
RTFDC1-206ENST00000477485 PSMB2P49721 201 aa3.15□□□□□ -1.91
RTFDC1-206ENST00000477485 C14orf144Q96I85 54 aa3.15□□□□□ -1.91
RTFDC1-206ENST00000477485 PRO1854Q9UHT4 67 aa3.15□□□□□ -1.91
RTFDC1-206ENST00000477485 TMEM256-PLSCR3K7ERE1 68 aa3.14□□□□□ -1.91
RTFDC1-206ENST00000477485 NDUFB1O75438 58 aa3.14□□□□□ -1.91
RTFDC1-206ENST00000477485 S100A6P06703 90 aa3.14□□□□□ -1.91
RTFDC1-206ENST00000477485 PCP4P48539 62 aa3.14□□□□□ -1.91
RTFDC1-206ENST00000477485 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
RTFDC1-206ENST00000477485 KRTAP4-7Q9BYR0 210 aa3.14□□□□□ -1.91
RTFDC1-206ENST00000477485 H3BQ85 93 aa3.13□□□□□ -1.91
RTFDC1-206ENST00000477485 DSCR8Q96T75 97 aa3.13□□□□□ -1.91
RTFDC1-206ENST00000477485 A6NN06 94 aa3.12□□□□□ -1.91
RTFDC1-206ENST00000477485 J3KT08 172 aa3.12□□□□□ -1.91
RTFDC1-206ENST00000477485 DLEU1O43261 78 aa3.12□□□□□ -1.91
RTFDC1-206ENST00000477485 CEND1Q8N111 149 aa3.12□□□□□ -1.91
RTFDC1-206ENST00000477485 PAM16Q9Y3D7 125 aa3.12□□□□□ -1.91
RTFDC1-206ENST00000477485 FAM236AA0A1B0GUQ0 79 aa3.11□□□□□ -1.91
RTFDC1-206ENST00000477485 FAM236BA0A1B0GV22 79 aa3.11□□□□□ -1.91
RTFDC1-206ENST00000477485 H1FX-AS1Q4G0G2 97 aa3.11□□□□□ -1.91
RTFDC1-206ENST00000477485 SPATA45Q537H7 98 aa3.11□□□□□ -1.91
RTFDC1-206ENST00000477485 HIGD1BQ9P298 99 aa3.11□□□□□ -1.91
RTFDC1-206ENST00000477485 IGKV3D-7A0A0C4DH55 119 aa3.1□□□□□ -1.91
RTFDC1-206ENST00000477485 COX6CP09669 75 aa3.1□□□□□ -1.91
RTFDC1-206ENST00000477485 FXYD2P54710 66 aa3.1□□□□□ -1.91
RTFDC1-206ENST00000477485 RBM3P98179 157 aaKnown RBP3.1□□□□□ -1.91
RTFDC1-206ENST00000477485 C2orf91Q6ZV80 131 aa3.1□□□□□ -1.91
RTFDC1-206ENST00000477485 C8orf17Q9NRJ1 99 aa3.1□□□□□ -1.91
RTFDC1-206ENST00000477485 K7ERJ3 54 aa3.09□□□□□ -1.91
RTFDC1-206ENST00000477485 NDUFS5O43920 106 aa3.09□□□□□ -1.91
RTFDC1-206ENST00000477485 UBE2V1Q13404 147 aa3.09□□□□□ -1.91
RTFDC1-206ENST00000477485 IGKV2D-30A0A075B6S6 120 aa3.08□□□□□ -1.92
RTFDC1-206ENST00000477485 C9JAW5 83 aa3.08□□□□□ -1.92
RTFDC1-206ENST00000477485 IGKV2-30P06310 120 aa3.08□□□□□ -1.92
RTFDC1-206ENST00000477485 S100A1P23297 94 aa3.08□□□□□ -1.92
RTFDC1-206ENST00000477485 KRTAP15-1Q3LI76 137 aa3.08□□□□□ -1.92
RTFDC1-206ENST00000477485 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
RTFDC1-206ENST00000477485 Q6ZVQ6 151 aa3.08□□□□□ -1.92
RTFDC1-206ENST00000477485 VAMP8Q9BV40 100 aa3.08□□□□□ -1.92
RTFDC1-206ENST00000477485 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
RTFDC1-206ENST00000477485 SCGB1C2P0DMR2 95 aa3.07□□□□□ -1.92
RTFDC1-206ENST00000477485 Q5VV11 94 aa3.06□□□□□ -1.92
RTFDC1-206ENST00000477485 Q6ZQT0 140 aa3.06□□□□□ -1.92
RTFDC1-206ENST00000477485 C5orf47Q569G3 176 aa3.05□□□□□ -1.92
RTFDC1-206ENST00000477485 NEBP20929 6669 aa3.04□□□□□ -1.92
RTFDC1-206ENST00000477485 LCE5AQ5TCM9 118 aa3.04□□□□□ -1.92
RTFDC1-206ENST00000477485 MRPL34Q9BQ48 92 aaKnown RBP3.04□□□□□ -1.92
RTFDC1-206ENST00000477485 BAALC-AS2P0C853 105 aa3.03□□□□□ -1.92
RTFDC1-206ENST00000477485 HSD52Q0P140 79 aa3.03□□□□□ -1.92
RTFDC1-206ENST00000477485 C7orf65Q6ZTY9 151 aa3.03□□□□□ -1.92
RTFDC1-206ENST00000477485 TMEM254Q8TBM7 123 aa3.03□□□□□ -1.92
RTFDC1-206ENST00000477485 IMUPQ9GZP8 106 aa3.03□□□□□ -1.92
RTFDC1-206ENST00000477485 MMP24-AS1A0A0U1RRL7 71 aa3.02□□□□□ -1.93
RTFDC1-206ENST00000477485 MT1BP07438 61 aa3.02□□□□□ -1.93
RTFDC1-206ENST00000477485 C4orf26Q17RF5 130 aa3.02□□□□□ -1.93
RTFDC1-206ENST00000477485 PRR15Q8IV56 129 aa3.02□□□□□ -1.93
RTFDC1-206ENST00000477485 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
RTFDC1-206ENST00000477485 hDV103S1A0JD37 113 aa3.01□□□□□ -1.93
RTFDC1-206ENST00000477485 NREPQ16612 68 aa3.01□□□□□ -1.93
RTFDC1-206ENST00000477485 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
RTFDC1-206ENST00000477485 JMJD7-PLA2G4BH0Y9G9 81 aa2.99□□□□□ -1.93
RTFDC1-206ENST00000477485 K7EQZ3 153 aa2.99□□□□□ -1.93
RTFDC1-206ENST00000477485 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
RTFDC1-206ENST00000477485 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
RTFDC1-206ENST00000477485 C14orf132Q9NPU4 83 aa2.99□□□□□ -1.93
RTFDC1-206ENST00000477485 S4R3F8 94 aa2.99□□□□□ -1.93
RTFDC1-206ENST00000477485 ATXN8Q156A1 80 aa2.98□□□□□ -1.93
RTFDC1-206ENST00000477485 Q5W150 140 aa2.98□□□□□ -1.93
RTFDC1-206ENST00000477485 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
RTFDC1-206ENST00000477485 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
RTFDC1-206ENST00000477485 LOC110117498A0A087WWA1 95 aa2.97□□□□□ -1.93
RTFDC1-206ENST00000477485 A0A1B0GW54 56 aa2.97□□□□□ -1.93
RTFDC1-206ENST00000477485 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
RTFDC1-206ENST00000477485 KRTAP19-8Q3LI54 63 aa2.97□□□□□ -1.93
RTFDC1-206ENST00000477485 CSAG1Q6PB30 78 aa2.97□□□□□ -1.93
RTFDC1-206ENST00000477485 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
RTFDC1-206ENST00000477485 HCG22E2RYF7 251 aa2.96□□□□□ -1.94
RTFDC1-206ENST00000477485 PDE6GP18545 87 aa2.96□□□□□ -1.94
RTFDC1-206ENST00000477485 SPRR2GQ9BYE4 73 aa2.96□□□□□ -1.94
RTFDC1-206ENST00000477485 NAA38Q9BRA0 125 aaKnown RBP2.95□□□□□ -1.94
RTFDC1-206ENST00000477485 BPY2O14599 106 aa2.94□□□□□ -1.94
RTFDC1-206ENST00000477485 SPRR2EP22531 72 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms