RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	SPINK6	Q6UWN8	80 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447	SACS	Q9NZJ4	4579 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447	DOPEY2	Q9Y3R5	2298 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447	LYST	Q99698	3801 aa		0.3	□□□□□ -2.36
TARDBP-208	ENST00000477447	FRAS1	Q86XX4	4008 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	NF1	P21359	2839 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	CACNA1A	O00555	2505 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	TACC2	O95359	2948 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	HIVEP1	P15822	2718 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447		M0QZ58	72 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	SRRM2	Q9UQ35	2752 aa	Known RBP	0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	EP300	Q09472	2414 aa	Predicted RBP	0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	BSN	Q9UPA5	3926 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	RANBP2	P49792	3224 aa	Known RBP	0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	PKD1L2	Q7Z442	2459 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	DNAH8	Q96JB1	4490 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	APOB	P04114	4563 aa	Known RBP	0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	UNC79	Q9P2D8	2635 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	KNL1	Q8NG31	2342 aa		0.29	□□□□□ -2.36
TARDBP-208	ENST00000477447	CUBN	O60494	3623 aa		0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447	CEP290	O15078	2479 aa		0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447	ZFYVE26	Q68DK2	2539 aa		0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447	SPEN	Q96T58	3664 aa	Known RBP	0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447	UTP20	O75691	2785 aa	Known RBP	0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447		H3BSH0	61 aa		0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447	TOMM7	Q9P0U1	55 aa		0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447	AKAP6	Q13023	2319 aa		0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447	WDR87	Q6ZQQ6	2873 aa		0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447	DNAH3	Q8TD57	4116 aa		0.28	□□□□□ -2.36
TARDBP-208	ENST00000477447	PKD1	P98161	4303 aa		0.28	□□□□□ -2.37
TARDBP-208	ENST00000477447	USP24	Q9UPU5	2620 aa		0.28	□□□□□ -2.37
TARDBP-208	ENST00000477447	GCN1	Q92616	2671 aa	Known RBP	0.28	□□□□□ -2.37
TARDBP-208	ENST00000477447	HSPG2	P98160	4391 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	DNAH9	Q9NYC9	4486 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	NBPF19	A0A087WUL8	3843 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	USP9Y	O00507	2555 aa	Predicted RBP	0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	EPG5	Q9HCE0	2579 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	CHD8	Q9HCK8	2581 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	STAB1	Q9NY15	2570 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	TENM2	Q9NT68	2774 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447		H0YGG7	62 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	HECTD4	Q9Y4D8	3996 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	LPA	P08519	4548 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	FLNB	O75369	2602 aa	Known RBP	0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	CELSR1	Q9NYQ6	3014 aa		0.27	□□□□□ -2.37
TARDBP-208	ENST00000477447	PKDREJ	Q9NTG1	2253 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	PDE4DIP	Q5VU43	2346 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	KMT2D	O14686	5537 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	NCOR1	O75376	2440 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	HIVEP3	Q5T1R4	2406 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	ANK3	Q12955	4377 aa	Known RBP	0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	VPS13D	Q5THJ4	4388 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	CHD7	Q9P2D1	2997 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447		K7EIM0	57 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	DEFB104A	Q8WTQ1	72 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447		U3KQA8	63 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	SPTA1	P02549	2419 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	PTPN13	Q12923	2485 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	PKD1L1	Q8TDX9	2849 aa		0.26	□□□□□ -2.37
TARDBP-208	ENST00000477447	DMXL1	Q9Y485	3027 aa		0.25	□□□□□ -2.37
TARDBP-208	ENST00000477447	TEP1	Q99973	2627 aa	Known RBP	0.25	□□□□□ -2.37
TARDBP-208	ENST00000477447	NBAS	A2RRP1	2371 aa		0.25	□□□□□ -2.37
TARDBP-208	ENST00000477447	DNAH2	Q9P225	4427 aa		0.25	□□□□□ -2.37
TARDBP-208	ENST00000477447	C9orf92	A6NGG3	77 aa		0.25	□□□□□ -2.37
TARDBP-208	ENST00000477447	TNP1	P09430	55 aa		0.25	□□□□□ -2.37
TARDBP-208	ENST00000477447	ZAN	Q9Y493	2812 aa		0.25	□□□□□ -2.37
TARDBP-208	ENST00000477447	FAT3	Q8TDW7	4589 aa		0.25	□□□□□ -2.37
TARDBP-208	ENST00000477447	ITPR3	Q14573	2671 aa		0.25	□□□□□ -2.37
TARDBP-208	ENST00000477447	RELN	P78509	3460 aa		0.25	□□□□□ -2.37
TARDBP-208	ENST00000477447	PKHD1	P08F94	4074 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	ZFHX4	Q86UP3	3567 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	NCOR2	Q9Y618	2525 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	WNK1	Q9H4A3	2382 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	COL12A1	Q99715	3063 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	KALRN	O60229	2985 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	SPRR2D	P22532	72 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	KRTAP8-1	Q8IUC2	63 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	TMEM167A	Q8TBQ9	72 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	LRP1	Q07954	4544 aa	Known RBP	0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	DYNC2H1	Q8NCM8	4307 aa	Known RBP	0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	CCDC168	Q8NDH2	2452 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	CSPG4	Q6UVK1	2322 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	SVEP1	Q4LDE5	3571 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	CSMD1	Q96PZ7	3565 aa		0.24	□□□□□ -2.37
TARDBP-208	ENST00000477447	SPTBN5	Q9NRC6	3674 aa	Known RBP	0.23	□□□□□ -2.37
TARDBP-208	ENST00000477447	ZZEF1	O43149	2961 aa		0.23	□□□□□ -2.37
TARDBP-208	ENST00000477447	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.23	□□□□□ -2.37
TARDBP-208	ENST00000477447		H3BNG1	76 aa		0.23	□□□□□ -2.37
TARDBP-208	ENST00000477447	NBEAL2	Q6ZNJ1	2754 aa		0.23	□□□□□ -2.37
TARDBP-208	ENST00000477447	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.23	□□□□□ -2.37
TARDBP-208	ENST00000477447	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.23	□□□□□ -2.37
TARDBP-208	ENST00000477447	DNAH6	Q9C0G6	4158 aa		0.23	□□□□□ -2.37
TARDBP-208	ENST00000477447	NIPBL	Q6KC79	2804 aa	eCLIP	0.23	□□□□□ -2.37
TARDBP-208	ENST00000477447	SMG1	Q96Q15	3661 aa	Known RBP	0.23	□□□□□ -2.37
TARDBP-208	ENST00000477447	APC2	O95996	2303 aa		0.22	□□□□□ -2.37
TARDBP-208	ENST00000477447	ITPR1	Q14643	2758 aa		0.22	□□□□□ -2.37
TARDBP-208	ENST00000477447	SPRR2B	P35325	72 aa		0.22	□□□□□ -2.37
TARDBP-208	ENST00000477447	TRIO	O75962	3097 aa		0.22	□□□□□ -2.37

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