RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 GTF2H5Q6ZYL4 71 aa9.49□□□□□ -0.89
SMIM4-202ENST00000476842 C20orf166-AS1Q96NR2 134 aa9.48□□□□□ -0.89
SMIM4-202ENST00000476842 IGHV6-1A0A0B4J1U7 121 aa9.46□□□□□ -0.9
SMIM4-202ENST00000476842 A8MUU9 505 aa9.46□□□□□ -0.9
SMIM4-202ENST00000476842 NREPQ16612 68 aa9.46□□□□□ -0.9
SMIM4-202ENST00000476842 ATP11AUNQ6ZP68 121 aa9.45□□□□□ -0.9
SMIM4-202ENST00000476842 NOTCH2NLQ7Z3S9 236 aa9.45□□□□□ -0.9
SMIM4-202ENST00000476842 FAT4Q6V0I7 4981 aa9.45□□□□□ -0.9
SMIM4-202ENST00000476842 A0A1B0GVX0 72 aa9.44□□□□□ -0.9
SMIM4-202ENST00000476842 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
SMIM4-202ENST00000476842 C8orf87E5RJ46 101 aa9.42□□□□□ -0.9
SMIM4-202ENST00000476842 F8W1H4 67 aa9.42□□□□□ -0.9
SMIM4-202ENST00000476842 NDUFB1O75438 58 aa9.41□□□□□ -0.9
SMIM4-202ENST00000476842 A8MWP4 228 aa9.39□□□□□ -0.91
SMIM4-202ENST00000476842 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
SMIM4-202ENST00000476842 PRR15Q8IV56 129 aa9.33□□□□□ -0.92
SMIM4-202ENST00000476842 C8orf17Q9NRJ1 99 aa9.32□□□□□ -0.92
SMIM4-202ENST00000476842 ETDBQ3ZM63 59 aa9.31□□□□□ -0.92
SMIM4-202ENST00000476842 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
SMIM4-202ENST00000476842 Q6ZVQ6 151 aa9.31□□□□□ -0.92
SMIM4-202ENST00000476842 BPY2O14599 106 aa9.29□□□□□ -0.92
SMIM4-202ENST00000476842 KRTAP19-2Q3LHN2 52 aa9.28□□□□□ -0.92
SMIM4-202ENST00000476842 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
SMIM4-202ENST00000476842 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
SMIM4-202ENST00000476842 Q8N9P0 234 aaPredicted RBP9.26□□□□□ -0.93
SMIM4-202ENST00000476842 UBL5Q9BZL1 73 aa9.26□□□□□ -0.93
SMIM4-202ENST00000476842 K7EQZ3 153 aa9.25□□□□□ -0.93
SMIM4-202ENST00000476842 MMP24-AS1A0A0U1RRL7 71 aa9.22□□□□□ -0.93
SMIM4-202ENST00000476842 TMEM254Q8TBM7 123 aa9.2□□□□□ -0.94
SMIM4-202ENST00000476842 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
SMIM4-202ENST00000476842 A0A1B0GV90 55 aa9.18□□□□□ -0.94
SMIM4-202ENST00000476842 hDV103S1A0JD37 113 aa9.18□□□□□ -0.94
SMIM4-202ENST00000476842 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
SMIM4-202ENST00000476842 Q8N9L7 120 aa9.16□□□□□ -0.94
SMIM4-202ENST00000476842 COX6B2Q6YFQ2 88 aa9.14□□□□□ -0.95
SMIM4-202ENST00000476842 ACYP1P07311 99 aa9.12□□□□□ -0.95
SMIM4-202ENST00000476842 MT1HP80294 61 aa9.11□□□□□ -0.95
SMIM4-202ENST00000476842 CXCL6P80162 114 aa9.09□□□□□ -0.95
SMIM4-202ENST00000476842 CASC2Q6XLA1 102 aa9.09□□□□□ -0.95
SMIM4-202ENST00000476842 WFDC13Q8IUB5 93 aa9.09□□□□□ -0.95
SMIM4-202ENST00000476842 FAM240AA0A1B0GVK7 77 aa9.07□□□□□ -0.96
SMIM4-202ENST00000476842 NDUFS5O43920 106 aa9.07□□□□□ -0.96
SMIM4-202ENST00000476842 HRES1P13985 223 aa9.06□□□□□ -0.96
SMIM4-202ENST00000476842 SPINK7P58062 85 aa9.05□□□□□ -0.96
SMIM4-202ENST00000476842 HCG22E2RYF7 251 aa9.04□□□□□ -0.96
SMIM4-202ENST00000476842 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
SMIM4-202ENST00000476842 FLGP20930 4061 aaPredicted RBP9.04□□□□□ -0.96
SMIM4-202ENST00000476842 RBM12B-AS1Q9P1G2 102 aa9.01□□□□□ -0.97
SMIM4-202ENST00000476842 Q5W150 140 aa8.97□□□□□ -0.97
SMIM4-202ENST00000476842 M0R2T5 61 aa8.96□□□□□ -0.98
SMIM4-202ENST00000476842 FAM236DA0A1B0GTK5 79 aa8.95□□□□□ -0.98
SMIM4-202ENST00000476842 FAM236CP0DP71 79 aa8.95□□□□□ -0.98
SMIM4-202ENST00000476842 ATP5EP2Q5VTU8 51 aa8.94□□□□□ -0.98
SMIM4-202ENST00000476842 KRTAP10-6P60371 365 aaPredicted RBP8.9□□□□□ -0.98
SMIM4-202ENST00000476842 LINC00643Q86TS7 51 aa8.9□□□□□ -0.98
SMIM4-202ENST00000476842 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
SMIM4-202ENST00000476842 TP53AIP1Q9HCN2 124 aa8.88□□□□□ -0.99
SMIM4-202ENST00000476842 IGKV2D-30A0A075B6S6 120 aa8.87□□□□□ -0.99
SMIM4-202ENST00000476842 J3QR89 54 aa8.87□□□□□ -0.99
SMIM4-202ENST00000476842 IGKV2-30P06310 120 aa8.87□□□□□ -0.99
SMIM4-202ENST00000476842 C7orf65Q6ZTY9 151 aa8.86□□□□□ -0.99
SMIM4-202ENST00000476842 HIST1H4AP62805 103 aaKnown RBP8.85□□□□□ -0.99
SMIM4-202ENST00000476842 KRTAP9-2Q9BYQ4 174 aa8.79□□□□□ -1
SMIM4-202ENST00000476842 A0A087WVE0 104 aa8.75□□□□□ -1.01
SMIM4-202ENST00000476842 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
SMIM4-202ENST00000476842 H1FX-AS1Q4G0G2 97 aa8.71□□□□□ -1.02
SMIM4-202ENST00000476842 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
SMIM4-202ENST00000476842 UQCRQO14949 82 aa8.69□□□□□ -1.02
SMIM4-202ENST00000476842 C4orf26Q17RF5 130 aa8.69□□□□□ -1.02
SMIM4-202ENST00000476842 KRTAP9-8Q9BYQ0 159 aa8.69□□□□□ -1.02
SMIM4-202ENST00000476842 K7ERU9 68 aa8.66□□□□□ -1.02
SMIM4-202ENST00000476842 CYP4F30PQ9H0H9 118 aa8.65□□□□□ -1.02
SMIM4-202ENST00000476842 LOC101927531A0A1B0GV80 90 aa8.63□□□□□ -1.03
SMIM4-202ENST00000476842 ATOX1O00244 68 aa8.61□□□□□ -1.03
SMIM4-202ENST00000476842 H0Y9P7 68 aa8.6□□□□□ -1.03
SMIM4-202ENST00000476842 KRTAP3-1Q9BYR8 98 aa8.6□□□□□ -1.03
SMIM4-202ENST00000476842 OCR1Q9BZK8 76 aa8.59□□□□□ -1.03
SMIM4-202ENST00000476842 C1orf64Q8NEQ6 169 aa8.58□□□□□ -1.04
SMIM4-202ENST00000476842 MT2AP02795 61 aa8.57□□□□□ -1.04
SMIM4-202ENST00000476842 IMUPQ9GZP8 106 aa8.57□□□□□ -1.04
SMIM4-202ENST00000476842 MT-ATP8P03928 68 aa8.53□□□□□ -1.04
SMIM4-202ENST00000476842 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
SMIM4-202ENST00000476842 C5orf47Q569G3 176 aa8.51□□□□□ -1.05
SMIM4-202ENST00000476842 MT1FP04733 61 aa8.5□□□□□ -1.05
SMIM4-202ENST00000476842 MP68P56378 58 aa8.5□□□□□ -1.05
SMIM4-202ENST00000476842 LINC00208Q96KT6 92 aa8.5□□□□□ -1.05
SMIM4-202ENST00000476842 KRTAP10-10P60014 251 aa8.49□□□□□ -1.05
SMIM4-202ENST00000476842 S4R3F8 94 aa8.45□□□□□ -1.06
SMIM4-202ENST00000476842 H3BPC8 53 aa8.44□□□□□ -1.06
SMIM4-202ENST00000476842 KLKP1Q107X0 134 aa8.41□□□□□ -1.06
SMIM4-202ENST00000476842 KRTAP9-3Q9BYQ3 159 aa8.41□□□□□ -1.06
SMIM4-202ENST00000476842 LCA10Q71F78 164 aa8.4□□□□□ -1.06
SMIM4-202ENST00000476842 KRTAP9-6A0A140TA67 174 aa8.39□□□□□ -1.07
SMIM4-202ENST00000476842 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
SMIM4-202ENST00000476842 FAM236AA0A1B0GUQ0 79 aa8.37□□□□□ -1.07
SMIM4-202ENST00000476842 FAM236BA0A1B0GV22 79 aa8.37□□□□□ -1.07
SMIM4-202ENST00000476842 CRCT1Q9UGL9 99 aa8.37□□□□□ -1.07
SMIM4-202ENST00000476842 SMIM20Q8N5G0 67 aa8.36□□□□□ -1.07
SMIM4-202ENST00000476842 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
SMIM4-202ENST00000476842 A8MUN3 132 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms