RNA–Protein interactions for RNA: ENST00000476672.1

FXR1-212, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-212ENST00000476672 SPINK6Q6UWN8 80 aa4.3□□□□□ -1.72
FXR1-212ENST00000476672 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
FXR1-212ENST00000476672 DEFB116Q30KQ4 102 aa4.29□□□□□ -1.72
FXR1-212ENST00000476672 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
FXR1-212ENST00000476672 SRRM2Q9UQ35 2752 aaKnown RBP4.28□□□□□ -1.72
FXR1-212ENST00000476672 A8MWP4 228 aa4.28□□□□□ -1.72
FXR1-212ENST00000476672 KRTAP13-2Q52LG2 175 aa4.28□□□□□ -1.72
FXR1-212ENST00000476672 PRR15Q8IV56 129 aa4.28□□□□□ -1.72
FXR1-212ENST00000476672 Q96NJ1 140 aa4.28□□□□□ -1.72
FXR1-212ENST00000476672 DYNC1H1Q14204 4646 aaKnown RBP4.28□□□□□ -1.72
FXR1-212ENST00000476672 A0A087X002 238 aa4.27□□□□□ -1.73
FXR1-212ENST00000476672 HCG22E2RYF7 251 aa4.27□□□□□ -1.73
FXR1-212ENST00000476672 ASB16-AS1Q495Z4 193 aa4.27□□□□□ -1.73
FXR1-212ENST00000476672 KRTAP29-1A8MX34 341 aaPredicted RBP4.26□□□□□ -1.73
FXR1-212ENST00000476672 NDUFB1O75438 58 aa4.26□□□□□ -1.73
FXR1-212ENST00000476672 PLA2G1BP04054 148 aaKnown RBP4.26□□□□□ -1.73
FXR1-212ENST00000476672 Q5XG85 94 aa4.26□□□□□ -1.73
FXR1-212ENST00000476672 OCR1Q9BZK8 76 aa4.26□□□□□ -1.73
FXR1-212ENST00000476672 SMR3BP02814 79 aaPredicted RBP4.25□□□□□ -1.73
FXR1-212ENST00000476672 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
FXR1-212ENST00000476672 KMT2CQ8NEZ4 4911 aaKnown RBP4.24□□□□□ -1.73
FXR1-212ENST00000476672 H3BS24 57 aa4.23□□□□□ -1.73
FXR1-212ENST00000476672 A0A1B0GVX0 72 aa4.22□□□□□ -1.73
FXR1-212ENST00000476672 CDK2AP2O75956 126 aa4.22□□□□□ -1.73
FXR1-212ENST00000476672 CASC2Q6XLA1 102 aa4.22□□□□□ -1.73
FXR1-212ENST00000476672 TYMSOSQ8TAI1 123 aa4.22□□□□□ -1.73
FXR1-212ENST00000476672 MMP24-AS1A0A0U1RRL7 71 aa4.21□□□□□ -1.74
FXR1-212ENST00000476672 SPINK1P00995 79 aa4.21□□□□□ -1.74
FXR1-212ENST00000476672 KLKP1Q107X0 134 aa4.21□□□□□ -1.74
FXR1-212ENST00000476672 WFDC13Q8IUB5 93 aa4.21□□□□□ -1.74
FXR1-212ENST00000476672 C20orf197Q8N268 126 aa4.21□□□□□ -1.74
FXR1-212ENST00000476672 LIMD2Q9BT23 127 aa4.2□□□□□ -1.74
FXR1-212ENST00000476672 C8orf17Q9NRJ1 99 aa4.2□□□□□ -1.74
FXR1-212ENST00000476672 APOBP04114 4563 aaKnown RBP4.2□□□□□ -1.74
FXR1-212ENST00000476672 IGHV6-1A0A0B4J1U7 121 aa4.19□□□□□ -1.74
FXR1-212ENST00000476672 hDV103S1A0JD37 113 aa4.19□□□□□ -1.74
FXR1-212ENST00000476672 RPS29P62273 56 aaKnown RBP4.19□□□□□ -1.74
FXR1-212ENST00000476672 C5orf47Q569G3 176 aa4.19□□□□□ -1.74
FXR1-212ENST00000476672 C1orf195Q5TG92 126 aa4.19□□□□□ -1.74
FXR1-212ENST00000476672 SPAG11AQ6PDA7 123 aa4.19□□□□□ -1.74
FXR1-212ENST00000476672 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
FXR1-212ENST00000476672 TMEM254Q8TBM7 123 aa4.19□□□□□ -1.74
FXR1-212ENST00000476672 A0A0U1RQV1 116 aa4.18□□□□□ -1.74
FXR1-212ENST00000476672 C8orf87E5RJ46 101 aa4.18□□□□□ -1.74
FXR1-212ENST00000476672 NDUFC1O43677 76 aa4.18□□□□□ -1.74
FXR1-212ENST00000476672 CYSTM1Q9H1C7 97 aa4.18□□□□□ -1.74
FXR1-212ENST00000476672 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
FXR1-212ENST00000476672 RYR3Q15413 4870 aa4.17□□□□□ -1.74
FXR1-212ENST00000476672 TMEM258P61165 79 aa4.17□□□□□ -1.74
FXR1-212ENST00000476672 LINC00304Q8N9R0 145 aa4.17□□□□□ -1.74
FXR1-212ENST00000476672 TP53AIP1Q9HCN2 124 aa4.17□□□□□ -1.74
FXR1-212ENST00000476672 SNURFQ9Y675 71 aa4.17□□□□□ -1.74
FXR1-212ENST00000476672 PKHD1P08F94 4074 aa4.16□□□□□ -1.74
FXR1-212ENST00000476672 MRPL34Q9BQ48 92 aaKnown RBP4.16□□□□□ -1.74
FXR1-212ENST00000476672 H7BZZ5 65 aa4.15□□□□□ -1.75
FXR1-212ENST00000476672 NOTCH2NLQ7Z3S9 236 aa4.15□□□□□ -1.75
FXR1-212ENST00000476672 ZCCHC13Q8WW36 166 aaKnown RBP4.15□□□□□ -1.75
FXR1-212ENST00000476672 H3BPC8 53 aa4.14□□□□□ -1.75
FXR1-212ENST00000476672 MP68P56378 58 aa4.14□□□□□ -1.75
FXR1-212ENST00000476672 LINC00313P59037 77 aa4.14□□□□□ -1.75
FXR1-212ENST00000476672 FAT1Q14517 4588 aa4.12□□□□□ -1.75
FXR1-212ENST00000476672 H0Y9P7 68 aa4.12□□□□□ -1.75
FXR1-212ENST00000476672 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
FXR1-212ENST00000476672 Q5VSD8 79 aa4.12□□□□□ -1.75
FXR1-212ENST00000476672 RYR1P21817 5038 aa4.12□□□□□ -1.75
FXR1-212ENST00000476672 TRAV22A0A0B4J277 110 aa4.11□□□□□ -1.75
FXR1-212ENST00000476672 FAM236DA0A1B0GTK5 79 aa4.1□□□□□ -1.75
FXR1-212ENST00000476672 NDUFS5O43920 106 aa4.1□□□□□ -1.75
FXR1-212ENST00000476672 FAM236CP0DP71 79 aa4.1□□□□□ -1.75
FXR1-212ENST00000476672 KRTAP10-8P60410 259 aa4.1□□□□□ -1.75
FXR1-212ENST00000476672 RPS28P62857 69 aaKnown RBP4.1□□□□□ -1.75
FXR1-212ENST00000476672 Q8N9P0 234 aaPredicted RBP4.1□□□□□ -1.75
FXR1-212ENST00000476672 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
FXR1-212ENST00000476672 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
FXR1-212ENST00000476672 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
FXR1-212ENST00000476672 C1orf64Q8NEQ6 169 aa4.09□□□□□ -1.75
FXR1-212ENST00000476672 ATP5EP56381 51 aaPredicted RBP4.08□□□□□ -1.76
FXR1-212ENST00000476672 KRTAP10-6P60371 365 aaPredicted RBP4.07□□□□□ -1.76
FXR1-212ENST00000476672 KRTAP13-3Q3SY46 172 aa4.07□□□□□ -1.76
FXR1-212ENST00000476672 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
FXR1-212ENST00000476672 Q5W150 140 aa4.06□□□□□ -1.76
FXR1-212ENST00000476672 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
FXR1-212ENST00000476672 SPANXA2-OT1Q8N9U9 137 aa4.05□□□□□ -1.76
FXR1-212ENST00000476672 SERP1Q9Y6X1 66 aa4.05□□□□□ -1.76
FXR1-212ENST00000476672 HSPG2P98160 4391 aa4.04□□□□□ -1.76
FXR1-212ENST00000476672 LOC101927531A0A1B0GV80 90 aa4.04□□□□□ -1.76
FXR1-212ENST00000476672 CYP4F30PQ9H0H9 118 aa4.03□□□□□ -1.76
FXR1-212ENST00000476672 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
FXR1-212ENST00000476672 EPPK1P58107 5090 aaKnown RBP4.02□□□□□ -1.77
FXR1-212ENST00000476672 IGLV7-46A0A075B6I9 117 aa4.01□□□□□ -1.77
FXR1-212ENST00000476672 A8MUU9 505 aa4□□□□□ -1.77
FXR1-212ENST00000476672 OXTP01178 125 aa4□□□□□ -1.77
FXR1-212ENST00000476672 MT1HL1P0DM35 61 aa4□□□□□ -1.77
FXR1-212ENST00000476672 FP248Q71RG6 208 aaPredicted RBP4□□□□□ -1.77
FXR1-212ENST00000476672 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
FXR1-212ENST00000476672 RETNLBQ9BQ08 111 aa4□□□□□ -1.77
FXR1-212ENST00000476672 IGKV2-30P06310 120 aa3.99□□□□□ -1.77
FXR1-212ENST00000476672 C9orf92A6NGG3 77 aa3.98□□□□□ -1.77
FXR1-212ENST00000476672 PCOTHQ58A44 107 aa3.98□□□□□ -1.77
FXR1-212ENST00000476672 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms