RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 NOTCH2NLQ7Z3S9 236 aa9.81□□□□□ -0.84
TVP23B-202ENST00000476139 KRTAP21-3Q3LHN1 58 aa9.8□□□□□ -0.84
TVP23B-202ENST00000476139 PCOTHQ58A44 107 aa9.8□□□□□ -0.84
TVP23B-202ENST00000476139 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
TVP23B-202ENST00000476139 PKHD1P08F94 4074 aa9.79□□□□□ -0.84
TVP23B-202ENST00000476139 VPS13BQ7Z7G8 4022 aa9.79□□□□□ -0.84
TVP23B-202ENST00000476139 C8orf17Q9NRJ1 99 aa9.78□□□□□ -0.84
TVP23B-202ENST00000476139 PRO0628Q9UI54 55 aa9.78□□□□□ -0.84
TVP23B-202ENST00000476139 A0A1B0GVX0 72 aa9.75□□□□□ -0.85
TVP23B-202ENST00000476139 CDK2AP2O75956 126 aa9.75□□□□□ -0.85
TVP23B-202ENST00000476139 ASB16-AS1Q495Z4 193 aa9.74□□□□□ -0.85
TVP23B-202ENST00000476139 SACSQ9NZJ4 4579 aa9.73□□□□□ -0.85
TVP23B-202ENST00000476139 H3BPC8 53 aa9.72□□□□□ -0.85
TVP23B-202ENST00000476139 KRTAP13-2Q52LG2 175 aa9.71□□□□□ -0.85
TVP23B-202ENST00000476139 Q1T7F1 81 aa9.7□□□□□ -0.86
TVP23B-202ENST00000476139 SSBP3-AS1Q7Z2R9 100 aa9.7□□□□□ -0.86
TVP23B-202ENST00000476139 A8MUN3 132 aa9.69□□□□□ -0.86
TVP23B-202ENST00000476139 CD164Q04900 197 aa9.68□□□□□ -0.86
TVP23B-202ENST00000476139 SPANXA2-OT1Q8N9U9 137 aa9.68□□□□□ -0.86
TVP23B-202ENST00000476139 MRPL34Q9BQ48 92 aaKnown RBP9.66□□□□□ -0.86
TVP23B-202ENST00000476139 TP53AIP1Q9HCN2 124 aa9.65□□□□□ -0.87
TVP23B-202ENST00000476139 KRTAP1-4P0C5Y4 121 aa9.64□□□□□ -0.87
TVP23B-202ENST00000476139 COA5Q86WW8 74 aa9.62□□□□□ -0.87
TVP23B-202ENST00000476139 IGLV7-46A0A075B6I9 117 aa9.61□□□□□ -0.87
TVP23B-202ENST00000476139 Q5W150 140 aa9.6□□□□□ -0.87
TVP23B-202ENST00000476139 Q8N9P0 234 aaPredicted RBP9.59□□□□□ -0.87
TVP23B-202ENST00000476139 A8MU10 97 aa9.59□□□□□ -0.87
TVP23B-202ENST00000476139 PLA2G1BP04054 148 aaKnown RBP9.58□□□□□ -0.88
TVP23B-202ENST00000476139 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
TVP23B-202ENST00000476139 C1orf195Q5TG92 126 aa9.57□□□□□ -0.88
TVP23B-202ENST00000476139 PRR15LQ9BU68 103 aa9.56□□□□□ -0.88
TVP23B-202ENST00000476139 SMR3BP02814 79 aaPredicted RBP9.55□□□□□ -0.88
TVP23B-202ENST00000476139 DYNC1H1Q14204 4646 aaKnown RBP9.55□□□□□ -0.88
TVP23B-202ENST00000476139 Q5VV11 94 aa9.54□□□□□ -0.88
TVP23B-202ENST00000476139 SPAG11AQ6PDA7 123 aa9.52□□□□□ -0.89
TVP23B-202ENST00000476139 FAT1Q14517 4588 aa9.52□□□□□ -0.89
TVP23B-202ENST00000476139 CHKB-CPT1BH3BT56 60 aa9.51□□□□□ -0.89
TVP23B-202ENST00000476139 KMT2CQ8NEZ4 4911 aaKnown RBP9.51□□□□□ -0.89
TVP23B-202ENST00000476139 V9GYY9 64 aa9.51□□□□□ -0.89
TVP23B-202ENST00000476139 LINC00313P59037 77 aa9.51□□□□□ -0.89
TVP23B-202ENST00000476139 TYMSOSQ8TAI1 123 aa9.49□□□□□ -0.89
TVP23B-202ENST00000476139 HRES1P13985 223 aa9.48□□□□□ -0.89
TVP23B-202ENST00000476139 LIMD2Q9BT23 127 aa9.47□□□□□ -0.89
TVP23B-202ENST00000476139 C8orf87E5RJ46 101 aa9.46□□□□□ -0.89
TVP23B-202ENST00000476139 KRTAP13-3Q3SY46 172 aa9.46□□□□□ -0.89
TVP23B-202ENST00000476139 PRR26Q8N8Z3 221 aa9.46□□□□□ -0.9
TVP23B-202ENST00000476139 A0A1B0GVY2 172 aa9.45□□□□□ -0.9
TVP23B-202ENST00000476139 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
TVP23B-202ENST00000476139 RYR2Q92736 4967 aa9.44□□□□□ -0.9
TVP23B-202ENST00000476139 APOBP04114 4563 aaKnown RBP9.43□□□□□ -0.9
TVP23B-202ENST00000476139 LOC101927531A0A1B0GV80 90 aa9.42□□□□□ -0.9
TVP23B-202ENST00000476139 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
TVP23B-202ENST00000476139 SPINK1P00995 79 aa9.39□□□□□ -0.91
TVP23B-202ENST00000476139 A6NED7 52 aa9.39□□□□□ -0.91
TVP23B-202ENST00000476139 SPTSSBQ8NFR3 76 aa9.35□□□□□ -0.91
TVP23B-202ENST00000476139 LINC00304Q8N9R0 145 aa9.34□□□□□ -0.91
TVP23B-202ENST00000476139 KRTAP10-4P60372 401 aaPredicted RBP9.34□□□□□ -0.91
TVP23B-202ENST00000476139 LCA10Q71F78 164 aa9.34□□□□□ -0.91
TVP23B-202ENST00000476139 FAM229AH3BQW9 127 aa9.32□□□□□ -0.92
TVP23B-202ENST00000476139 Q75L30 129 aa9.32□□□□□ -0.92
TVP23B-202ENST00000476139 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
TVP23B-202ENST00000476139 IGKV2D-30A0A075B6S6 120 aa9.29□□□□□ -0.92
TVP23B-202ENST00000476139 IGKV2-30P06310 120 aa9.29□□□□□ -0.92
TVP23B-202ENST00000476139 PMAIP1Q13794 54 aa9.29□□□□□ -0.92
TVP23B-202ENST00000476139 SPINK7P58062 85 aa9.28□□□□□ -0.92
TVP23B-202ENST00000476139 ACYP2P14621 99 aa9.27□□□□□ -0.93
TVP23B-202ENST00000476139 PKHD1L1Q86WI1 4243 aa9.22□□□□□ -0.93
TVP23B-202ENST00000476139 RPS29P62273 56 aaKnown RBP9.21□□□□□ -0.94
TVP23B-202ENST00000476139 DMAC1Q96GE9 116 aa9.21□□□□□ -0.94
TVP23B-202ENST00000476139 RYR3Q15413 4870 aa9.21□□□□□ -0.94
TVP23B-202ENST00000476139 SEC61GP60059 68 aa9.2□□□□□ -0.94
TVP23B-202ENST00000476139 C9orf92A6NGG3 77 aa9.18□□□□□ -0.94
TVP23B-202ENST00000476139 LRP1Q07954 4544 aaKnown RBP9.17□□□□□ -0.94
TVP23B-202ENST00000476139 CDC42SE1Q9NRR8 79 aa9.16□□□□□ -0.94
TVP23B-202ENST00000476139 ATP11AUNQ6ZP68 121 aa9.13□□□□□ -0.95
TVP23B-202ENST00000476139 C7orf65Q6ZTY9 151 aa9.12□□□□□ -0.95
TVP23B-202ENST00000476139 HSPG2P98160 4391 aa9.11□□□□□ -0.95
TVP23B-202ENST00000476139 Q8N1X5 172 aa9.09□□□□□ -0.95
TVP23B-202ENST00000476139 A0A1B0GU69 56 aa9.07□□□□□ -0.96
TVP23B-202ENST00000476139 FLG2Q5D862 2391 aaPredicted RBP9.07□□□□□ -0.96
TVP23B-202ENST00000476139 TNXBP22105 4242 aa9.04□□□□□ -0.96
TVP23B-202ENST00000476139 A6NN06 94 aa9.03□□□□□ -0.96
TVP23B-202ENST00000476139 KRTAP17-1Q9BYP8 105 aa9.03□□□□□ -0.96
TVP23B-202ENST00000476139 Q5VSD8 79 aa9.02□□□□□ -0.97
TVP23B-202ENST00000476139 C20orf166-AS1Q96NR2 134 aa9.01□□□□□ -0.97
TVP23B-202ENST00000476139 A8MUU9 505 aa9□□□□□ -0.97
TVP23B-202ENST00000476139 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
TVP23B-202ENST00000476139 RYR1P21817 5038 aa8.98□□□□□ -0.97
TVP23B-202ENST00000476139 FAT3Q8TDW7 4589 aa8.98□□□□□ -0.97
TVP23B-202ENST00000476139 DMBT1Q9UGM3 2413 aaPredicted RBP8.97□□□□□ -0.97
TVP23B-202ENST00000476139 KTN1-AS1Q86SY8 53 aa8.97□□□□□ -0.97
TVP23B-202ENST00000476139 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
TVP23B-202ENST00000476139 MYCBP2O75592 4640 aa8.95□□□□□ -0.98
TVP23B-202ENST00000476139 EPPK1P58107 5090 aaKnown RBP8.88□□□□□ -0.99
TVP23B-202ENST00000476139 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
TVP23B-202ENST00000476139 UQCR11O14957 56 aa8.86□□□□□ -0.99
TVP23B-202ENST00000476139 KRTAP3-1Q9BYR8 98 aa8.85□□□□□ -0.99
TVP23B-202ENST00000476139 SPATA8Q6RVD6 105 aa8.84□□□□□ -0.99
TVP23B-202ENST00000476139 RBM12B-AS1Q9P1G2 102 aa8.81□□□□□ -1
TVP23B-202ENST00000476139 ADM2Q7Z4H4 148 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms