RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	IGLV5-48	A0A075B6I7	105 aa		3.74	□□□□□ -1.81
HDAC9-223	ENST00000476135		F8WEM9	126 aa		3.74	□□□□□ -1.81
HDAC9-223	ENST00000476135		K7ERJ3	54 aa		3.74	□□□□□ -1.81
HDAC9-223	ENST00000476135	COX6C	P09669	75 aa		3.74	□□□□□ -1.81
HDAC9-223	ENST00000476135	PSMB2	P49721	201 aa		3.74	□□□□□ -1.81
HDAC9-223	ENST00000476135	CD164	Q04900	197 aa		3.74	□□□□□ -1.81
HDAC9-223	ENST00000476135		Q6Q795	121 aa		3.74	□□□□□ -1.81
HDAC9-223	ENST00000476135	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.74	□□□□□ -1.81
HDAC9-223	ENST00000476135		Q6ZQY7	126 aa		3.74	□□□□□ -1.81
HDAC9-223	ENST00000476135	DEFB105A	Q8NG35	78 aa		3.74	□□□□□ -1.81
HDAC9-223	ENST00000476135		A0A1B0GX51	115 aa		3.73	□□□□□ -1.81
HDAC9-223	ENST00000476135	MT1F	P04733	61 aa		3.73	□□□□□ -1.81
HDAC9-223	ENST00000476135	OCIAD2	Q56VL3	154 aa		3.73	□□□□□ -1.81
HDAC9-223	ENST00000476135	SMIM29	Q86T20	159 aa		3.73	□□□□□ -1.81
HDAC9-223	ENST00000476135	PPDPFL	Q8WWR9	84 aa		3.73	□□□□□ -1.81
HDAC9-223	ENST00000476135	DNAL4	O96015	105 aa		3.72	□□□□□ -1.81
HDAC9-223	ENST00000476135	RPL37	P61927	97 aa	Known RBP	3.72	□□□□□ -1.81
HDAC9-223	ENST00000476135		H3BQ85	93 aa		3.7	□□□□□ -1.82
HDAC9-223	ENST00000476135	SCGB1C2	P0DMR2	95 aa		3.7	□□□□□ -1.82
HDAC9-223	ENST00000476135	BATF	Q16520	125 aa		3.7	□□□□□ -1.82
HDAC9-223	ENST00000476135	LYRM7	Q5U5X0	104 aa		3.7	□□□□□ -1.82
HDAC9-223	ENST00000476135	NOTCH2NL	Q7Z3S9	236 aa		3.7	□□□□□ -1.82
HDAC9-223	ENST00000476135	LIMD2	Q9BT23	127 aa		3.7	□□□□□ -1.82
HDAC9-223	ENST00000476135	FAM240A	A0A1B0GVK7	77 aa		3.69	□□□□□ -1.82
HDAC9-223	ENST00000476135	KRTAP10-10	P60014	251 aa		3.69	□□□□□ -1.82
HDAC9-223	ENST00000476135	CLEC2B	Q92478	149 aa		3.69	□□□□□ -1.82
HDAC9-223	ENST00000476135	SNHG12	Q9BXW3	62 aa		3.69	□□□□□ -1.82
HDAC9-223	ENST00000476135	MUC12	Q9UKN1	5478 aa		3.68	□□□□□ -1.82
HDAC9-223	ENST00000476135		Q6JHZ5	121 aa		3.68	□□□□□ -1.82
HDAC9-223	ENST00000476135	ORMDL1	Q9P0S3	153 aa		3.68	□□□□□ -1.82
HDAC9-223	ENST00000476135	LST1	O00453	97 aa		3.67	□□□□□ -1.82
HDAC9-223	ENST00000476135	TRAC	P01848	142 aa		3.67	□□□□□ -1.82
HDAC9-223	ENST00000476135	FABP2	P12104	132 aa		3.67	□□□□□ -1.82
HDAC9-223	ENST00000476135	KRTAP2-3	P0C7H8	128 aa		3.66	□□□□□ -1.82
HDAC9-223	ENST00000476135	ATXN8	Q156A1	80 aa		3.66	□□□□□ -1.82
HDAC9-223	ENST00000476135	KRTAP2-4	Q9BYR9	128 aa		3.66	□□□□□ -1.82
HDAC9-223	ENST00000476135	TMEM256-PLSCR3	K7ERE1	68 aa		3.65	□□□□□ -1.83
HDAC9-223	ENST00000476135	HRCT1	Q6UXD1	115 aa		3.65	□□□□□ -1.83
HDAC9-223	ENST00000476135	TRBV20-1	A0A075B6N2	111 aa		3.64	□□□□□ -1.83
HDAC9-223	ENST00000476135		H3BUT2	72 aa		3.64	□□□□□ -1.83
HDAC9-223	ENST00000476135	TCL1B	O95988	128 aa		3.64	□□□□□ -1.83
HDAC9-223	ENST00000476135	IGFL1	Q6UW32	110 aa		3.64	□□□□□ -1.83
HDAC9-223	ENST00000476135	NAA38	Q9BRA0	125 aa	Known RBP	3.64	□□□□□ -1.83
HDAC9-223	ENST00000476135		H3BMG7	143 aa		3.63	□□□□□ -1.83
HDAC9-223	ENST00000476135	COL5A1-AS1	Q5SY13	56 aa		3.63	□□□□□ -1.83
HDAC9-223	ENST00000476135		A0A1W2PPM0	123 aa		3.62	□□□□□ -1.83
HDAC9-223	ENST00000476135	TAX1BP3	O14907	124 aa		3.62	□□□□□ -1.83
HDAC9-223	ENST00000476135		Q5XG85	94 aa		3.62	□□□□□ -1.83
HDAC9-223	ENST00000476135	ANKRD29	Q8N6D5	301 aa		3.62	□□□□□ -1.83
HDAC9-223	ENST00000476135	SS18L2	Q9UHA2	77 aa		3.62	□□□□□ -1.83
HDAC9-223	ENST00000476135	TRBV7-7	A0A0K0K1E9	115 aa		3.61	□□□□□ -1.83
HDAC9-223	ENST00000476135	C4orf26	Q17RF5	130 aa		3.61	□□□□□ -1.83
HDAC9-223	ENST00000476135		A0A0G2JQZ4	141 aa		3.6	□□□□□ -1.83
HDAC9-223	ENST00000476135		A0A1B0GV72	72 aa		3.6	□□□□□ -1.83
HDAC9-223	ENST00000476135	BAALC-AS2	P0C853	105 aa		3.6	□□□□□ -1.83
HDAC9-223	ENST00000476135	KRTAP10-5	P60370	271 aa		3.6	□□□□□ -1.83
HDAC9-223	ENST00000476135	CXCL6	P80162	114 aa		3.6	□□□□□ -1.83
HDAC9-223	ENST00000476135	TEN1	Q86WV5	123 aa		3.6	□□□□□ -1.83
HDAC9-223	ENST00000476135		C9JAW5	83 aa		3.59	□□□□□ -1.83
HDAC9-223	ENST00000476135	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.59	□□□□□ -1.83
HDAC9-223	ENST00000476135	RBM3	P98179	157 aa	Known RBP	3.59	□□□□□ -1.83
HDAC9-223	ENST00000476135	DSCR8	Q96T75	97 aa		3.59	□□□□□ -1.83
HDAC9-223	ENST00000476135	SPCS1	Q9Y6A9	102 aa		3.59	□□□□□ -1.83
HDAC9-223	ENST00000476135	TRBV7-4	A0A0J9YYF1	115 aa		3.58	□□□□□ -1.84
HDAC9-223	ENST00000476135		H3BT86	120 aa		3.58	□□□□□ -1.84
HDAC9-223	ENST00000476135	CCK	P06307	115 aa		3.58	□□□□□ -1.84
HDAC9-223	ENST00000476135		A0A087WSZ3	146 aa		3.57	□□□□□ -1.84
HDAC9-223	ENST00000476135	KRTAP5-9	P26371	169 aa		3.57	□□□□□ -1.84
HDAC9-223	ENST00000476135	C1orf195	Q5TG92	126 aa		3.57	□□□□□ -1.84
HDAC9-223	ENST00000476135	ATP11AUN	Q6ZP68	121 aa		3.57	□□□□□ -1.84
HDAC9-223	ENST00000476135	VPS25	Q9BRG1	176 aa		3.57	□□□□□ -1.84
HDAC9-223	ENST00000476135		A0A1W2PNM2	257 aa		3.56	□□□□□ -1.84
HDAC9-223	ENST00000476135	PSPHP1	O15172	72 aa		3.56	□□□□□ -1.84
HDAC9-223	ENST00000476135	PDE6G	P18545	87 aa		3.56	□□□□□ -1.84
HDAC9-223	ENST00000476135	KRTAP5-1	Q6L8H4	278 aa		3.56	□□□□□ -1.84
HDAC9-223	ENST00000476135	C20orf166-AS1	Q96NR2	134 aa		3.56	□□□□□ -1.84
HDAC9-223	ENST00000476135	LOC110117498	A0A087WWA1	95 aa		3.55	□□□□□ -1.84
HDAC9-223	ENST00000476135		K7EP34	96 aa		3.55	□□□□□ -1.84
HDAC9-223	ENST00000476135	GTF2H5	Q6ZYL4	71 aa		3.55	□□□□□ -1.84
HDAC9-223	ENST00000476135	KMT2D	O14686	5537 aa		3.54	□□□□□ -1.84
HDAC9-223	ENST00000476135		A0A1B0GW54	56 aa		3.54	□□□□□ -1.84
HDAC9-223	ENST00000476135	NDUFS5	O43920	106 aa		3.53	□□□□□ -1.84
HDAC9-223	ENST00000476135		Q6ZQT0	140 aa		3.53	□□□□□ -1.84
HDAC9-223	ENST00000476135	OBSCN-AS1	Q96MR7	158 aa		3.53	□□□□□ -1.84
HDAC9-223	ENST00000476135	SIGMAR1	Q99720	223 aa		3.53	□□□□□ -1.84
HDAC9-223	ENST00000476135	C14orf132	Q9NPU4	83 aa		3.53	□□□□□ -1.84
HDAC9-223	ENST00000476135	PRO0628	Q9UI54	55 aa		3.52	□□□□□ -1.85
HDAC9-223	ENST00000476135	MDN1	Q9NU22	5596 aa		3.52	□□□□□ -1.85
HDAC9-223	ENST00000476135	KRTAP2-1	Q9BYU5	128 aa		3.51	□□□□□ -1.85
HDAC9-223	ENST00000476135	SMIM26	A0A096LP01	95 aa		3.5	□□□□□ -1.85
HDAC9-223	ENST00000476135	IGHV6-1	A0A0B4J1U7	121 aa		3.5	□□□□□ -1.85
HDAC9-223	ENST00000476135	FAM236D	A0A1B0GTK5	79 aa		3.5	□□□□□ -1.85
HDAC9-223	ENST00000476135		J3KT08	172 aa		3.5	□□□□□ -1.85
HDAC9-223	ENST00000476135	IGKV4-1	P06312	121 aa		3.5	□□□□□ -1.85
HDAC9-223	ENST00000476135	FAM236C	P0DP71	79 aa		3.5	□□□□□ -1.85
HDAC9-223	ENST00000476135		Q96NJ1	140 aa		3.5	□□□□□ -1.85
HDAC9-223	ENST00000476135		F8W1H4	67 aa		3.49	□□□□□ -1.85
HDAC9-223	ENST00000476135	PRO0461	Q9UI25	63 aa		3.49	□□□□□ -1.85
HDAC9-223	ENST00000476135	LINC00472	Q9H8W2	130 aa		3.48	□□□□□ -1.85
HDAC9-223	ENST00000476135	C8orf87	E5RJ46	101 aa		3.47	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms