RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 PLAC8Q9NZF1 115 aa1.5□□□□□ -2.17
SRGAP3-205ENST00000475560 TGP01266 2768 aa1.5□□□□□ -2.17
SRGAP3-205ENST00000475560 CACNA1EQ15878 2313 aa1.5□□□□□ -2.17
SRGAP3-205ENST00000475560 ADGRG4Q8IZF6 3080 aa1.5□□□□□ -2.17
SRGAP3-205ENST00000475560 HERC2O95714 4834 aa1.5□□□□□ -2.17
SRGAP3-205ENST00000475560 DNAJC13O75165 2243 aa1.5□□□□□ -2.17
SRGAP3-205ENST00000475560 OTOGQ6ZRI0 2925 aa1.5□□□□□ -2.17
SRGAP3-205ENST00000475560 RPS27P42677 84 aaKnown RBP1.49□□□□□ -2.17
SRGAP3-205ENST00000475560 C10orf95Q9H7T3 257 aa1.49□□□□□ -2.17
SRGAP3-205ENST00000475560 ITPR2Q14571 2701 aa1.49□□□□□ -2.17
SRGAP3-205ENST00000475560 SPTBN1Q01082 2364 aaKnown RBP1.49□□□□□ -2.17
SRGAP3-205ENST00000475560 NBPF19A0A087WUL8 3843 aa1.49□□□□□ -2.17
SRGAP3-205ENST00000475560 WDFY3Q8IZQ1 3526 aa1.49□□□□□ -2.17
SRGAP3-205ENST00000475560 CACNA1CQ13936 2221 aa1.48□□□□□ -2.17
SRGAP3-205ENST00000475560 NDUFA4O00483 81 aa1.48□□□□□ -2.17
SRGAP3-205ENST00000475560 NDUFA1O15239 70 aa1.48□□□□□ -2.17
SRGAP3-205ENST00000475560 LINC00308Q8TCZ7 52 aa1.48□□□□□ -2.17
SRGAP3-205ENST00000475560 CHD7Q9P2D1 2997 aa1.48□□□□□ -2.17
SRGAP3-205ENST00000475560 HIVEP1P15822 2718 aa1.48□□□□□ -2.17
SRGAP3-205ENST00000475560 LRBAP50851 2863 aa1.48□□□□□ -2.17
SRGAP3-205ENST00000475560 DMXL2Q8TDJ6 3036 aa1.47□□□□□ -2.17
SRGAP3-205ENST00000475560 ETDCA0A1B0GVM5 59 aa1.47□□□□□ -2.17
SRGAP3-205ENST00000475560 PIGYQ3MUY2 71 aa1.47□□□□□ -2.17
SRGAP3-205ENST00000475560 GAFA1Q96PS6 74 aa1.47□□□□□ -2.17
SRGAP3-205ENST00000475560 KCNQ1DNQ9H478 68 aa1.47□□□□□ -2.17
SRGAP3-205ENST00000475560 ABCA13Q86UQ4 5058 aa1.47□□□□□ -2.17
SRGAP3-205ENST00000475560 NSD1Q96L73 2696 aaPredicted RBP1.46□□□□□ -2.18
SRGAP3-205ENST00000475560 AHCTF1Q8WYP5 2266 aa1.46□□□□□ -2.18
SRGAP3-205ENST00000475560 SPINK7P58062 85 aa1.46□□□□□ -2.18
SRGAP3-205ENST00000475560 PRCDQ00LT1 54 aa1.46□□□□□ -2.18
SRGAP3-205ENST00000475560 TNCP24821 2201 aa1.46□□□□□ -2.18
SRGAP3-205ENST00000475560 SONP18583 2426 aaKnown RBP1.45□□□□□ -2.18
SRGAP3-205ENST00000475560 DMDP11532 3685 aa1.45□□□□□ -2.18
SRGAP3-205ENST00000475560 CRIP1P50238 77 aa1.45□□□□□ -2.18
SRGAP3-205ENST00000475560 DEFB112Q30KQ8 113 aa1.45□□□□□ -2.18
SRGAP3-205ENST00000475560 SPATA8Q6RVD6 105 aa1.45□□□□□ -2.18
SRGAP3-205ENST00000475560 SSBP3-AS1Q7Z2R9 100 aa1.45□□□□□ -2.18
SRGAP3-205ENST00000475560 KNTC1P50748 2209 aa1.45□□□□□ -2.18
SRGAP3-205ENST00000475560 BSNQ9UPA5 3926 aa1.45□□□□□ -2.18
SRGAP3-205ENST00000475560 NIPBLQ6KC79 2804 aaeCLIP1.44□□□□□ -2.18
SRGAP3-205ENST00000475560 USF3Q68DE3 2245 aa1.44□□□□□ -2.18
SRGAP3-205ENST00000475560 CSMD2Q7Z408 3487 aa1.44□□□□□ -2.18
SRGAP3-205ENST00000475560 SPENQ96T58 3664 aaKnown RBP1.44□□□□□ -2.18
SRGAP3-205ENST00000475560 TENM3Q9P273 2699 aa1.43□□□□□ -2.18
SRGAP3-205ENST00000475560 TENM2Q9NT68 2774 aa1.43□□□□□ -2.18
SRGAP3-205ENST00000475560 ACANP16112 2415 aa1.43□□□□□ -2.18
SRGAP3-205ENST00000475560 MRPL33O75394 65 aaKnown RBP1.43□□□□□ -2.18
SRGAP3-205ENST00000475560 COX7BP24311 80 aa1.43□□□□□ -2.18
SRGAP3-205ENST00000475560 MEGF8Q7Z7M0 2845 aa1.43□□□□□ -2.18
SRGAP3-205ENST00000475560 HERC1Q15751 4861 aa1.42□□□□□ -2.18
SRGAP3-205ENST00000475560 AKAP13Q12802 2813 aa1.42□□□□□ -2.18
SRGAP3-205ENST00000475560 MXRA5Q9NR99 2828 aa1.42□□□□□ -2.18
SRGAP3-205ENST00000475560 ACACAQ13085 2346 aa1.42□□□□□ -2.18
SRGAP3-205ENST00000475560 POLR2KP53803 58 aaKnown RBP1.42□□□□□ -2.18
SRGAP3-205ENST00000475560 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
SRGAP3-205ENST00000475560 PRRC2CQ9Y520 2896 aaKnown RBP1.42□□□□□ -2.18
SRGAP3-205ENST00000475560 APC2O95996 2303 aa1.41□□□□□ -2.18
SRGAP3-205ENST00000475560 LINC00959A0A1B0GUT2 108 aa1.41□□□□□ -2.18
SRGAP3-205ENST00000475560 RPL39P62891 51 aaKnown RBP1.41□□□□□ -2.18
SRGAP3-205ENST00000475560 RPL39LQ96EH5 51 aaKnown RBP1.41□□□□□ -2.18
SRGAP3-205ENST00000475560 CADP27708 2225 aa1.41□□□□□ -2.18
SRGAP3-205ENST00000475560 DEFB131BA0A096LNP1 70 aa1.4□□□□□ -2.19
SRGAP3-205ENST00000475560 LINC00158P58513 81 aa1.4□□□□□ -2.19
SRGAP3-205ENST00000475560 CENPEQ02224 2701 aa1.39□□□□□ -2.19
SRGAP3-205ENST00000475560 APCP25054 2843 aa1.39□□□□□ -2.19
SRGAP3-205ENST00000475560 A0A1B0GU69 56 aa1.39□□□□□ -2.19
SRGAP3-205ENST00000475560 ATMQ13315 3056 aa1.39□□□□□ -2.19
SRGAP3-205ENST00000475560 DCHS2Q6V1P9 2916 aa1.38□□□□□ -2.19
SRGAP3-205ENST00000475560 TMEM167AQ8TBQ9 72 aa1.38□□□□□ -2.19
SRGAP3-205ENST00000475560 LAMA5O15230 3695 aa1.38□□□□□ -2.19
SRGAP3-205ENST00000475560 CHD9Q3L8U1 2897 aa1.37□□□□□ -2.19
SRGAP3-205ENST00000475560 PRB3Q04118 309 aaPredicted RBP1.37□□□□□ -2.19
SRGAP3-205ENST00000475560 WT1-ASQ06250 92 aa1.37□□□□□ -2.19
SRGAP3-205ENST00000475560 Q8IZM0 81 aa1.37□□□□□ -2.19
SRGAP3-205ENST00000475560 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
SRGAP3-205ENST00000475560 CDKN2A-AS1Q9UH64 79 aa1.37□□□□□ -2.19
SRGAP3-205ENST00000475560 SVEP1Q4LDE5 3571 aa1.37□□□□□ -2.19
SRGAP3-205ENST00000475560 FAT4Q6V0I7 4981 aa1.36□□□□□ -2.19
SRGAP3-205ENST00000475560 M0QY20 66 aa1.36□□□□□ -2.19
SRGAP3-205ENST00000475560 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
SRGAP3-205ENST00000475560 RPL39P5Q59GN2 51 aa1.36□□□□□ -2.19
SRGAP3-205ENST00000475560 LEAP2Q969E1 77 aa1.36□□□□□ -2.19
SRGAP3-205ENST00000475560 LAMA1P25391 3075 aa1.36□□□□□ -2.19
SRGAP3-205ENST00000475560 KNL1Q8NG31 2342 aa1.35□□□□□ -2.19
SRGAP3-205ENST00000475560 URB1O60287 2271 aaKnown RBP1.35□□□□□ -2.19
SRGAP3-205ENST00000475560 COX6A2Q02221 97 aa1.35□□□□□ -2.19
SRGAP3-205ENST00000475560 TP53AIP1Q9HCN2 124 aa1.35□□□□□ -2.19
SRGAP3-205ENST00000475560 CUBNO60494 3623 aa1.35□□□□□ -2.19
SRGAP3-205ENST00000475560 FSIP2Q5CZC0 6907 aa1.35□□□□□ -2.19
SRGAP3-205ENST00000475560 PLCE1Q9P212 2302 aa1.34□□□□□ -2.19
SRGAP3-205ENST00000475560 DMBT1Q9UGM3 2413 aaPredicted RBP1.34□□□□□ -2.19
SRGAP3-205ENST00000475560 SPTY2D1-AS1A0A0U1RR47 76 aa1.34□□□□□ -2.19
SRGAP3-205ENST00000475560 DEFB108AA8MXU0 73 aa1.34□□□□□ -2.19
SRGAP3-205ENST00000475560 I3L2K1 104 aa1.34□□□□□ -2.19
SRGAP3-205ENST00000475560 K7EQZ3 153 aa1.34□□□□□ -2.19
SRGAP3-205ENST00000475560 IGLV5-48A0A075B6I7 105 aa1.33□□□□□ -2.2
SRGAP3-205ENST00000475560 STATHP02808 62 aa1.33□□□□□ -2.2
SRGAP3-205ENST00000475560 COX14Q96I36 57 aa1.33□□□□□ -2.2
SRGAP3-205ENST00000475560 MGAQ8IWI9 3026 aa1.33□□□□□ -2.2
SRGAP3-205ENST00000475560 MAP1AP78559 2803 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms