RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 IGLV9-49A0A0B4J1Y8 123 aa4.17□□□□□ -1.74
SHQ1-207ENST00000475558 TRBV7-7A0A0K0K1E9 115 aa4.17□□□□□ -1.74
SHQ1-207ENST00000475558 C3orf22Q8N5N4 141 aa4.17□□□□□ -1.74
SHQ1-207ENST00000475558 VPS25Q9BRG1 176 aa4.17□□□□□ -1.74
SHQ1-207ENST00000475558 ATP5EP2Q5VTU8 51 aa4.16□□□□□ -1.74
SHQ1-207ENST00000475558 A0A1W2PNM2 257 aa4.15□□□□□ -1.75
SHQ1-207ENST00000475558 SPINK1P00995 79 aa4.15□□□□□ -1.75
SHQ1-207ENST00000475558 RPS29P62273 56 aaKnown RBP4.15□□□□□ -1.75
SHQ1-207ENST00000475558 Q5XG85 94 aa4.15□□□□□ -1.75
SHQ1-207ENST00000475558 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
SHQ1-207ENST00000475558 IMUPQ9GZP8 106 aa4.15□□□□□ -1.75
SHQ1-207ENST00000475558 J3KT08 172 aa4.14□□□□□ -1.75
SHQ1-207ENST00000475558 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
SHQ1-207ENST00000475558 MOBPQ13875 183 aa4.14□□□□□ -1.75
SHQ1-207ENST00000475558 SIGMAR1Q99720 223 aa4.14□□□□□ -1.75
SHQ1-207ENST00000475558 LIMD2Q9BT23 127 aa4.14□□□□□ -1.75
SHQ1-207ENST00000475558 LINC00846Q9NV44 126 aa4.14□□□□□ -1.75
SHQ1-207ENST00000475558 A0A1B0GV72 72 aa4.13□□□□□ -1.75
SHQ1-207ENST00000475558 CXCL6P80162 114 aa4.13□□□□□ -1.75
SHQ1-207ENST00000475558 ASB16-AS1Q495Z4 193 aa4.13□□□□□ -1.75
SHQ1-207ENST00000475558 C5orf47Q569G3 176 aa4.12□□□□□ -1.75
SHQ1-207ENST00000475558 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
SHQ1-207ENST00000475558 A0A087WSZ3 146 aa4.11□□□□□ -1.75
SHQ1-207ENST00000475558 BPY2O14599 106 aa4.11□□□□□ -1.75
SHQ1-207ENST00000475558 NDUFB1O75438 58 aa4.11□□□□□ -1.75
SHQ1-207ENST00000475558 Q6ZVQ6 151 aa4.11□□□□□ -1.75
SHQ1-207ENST00000475558 A0A087X002 238 aa4.1□□□□□ -1.75
SHQ1-207ENST00000475558 KRTAP10-8P60410 259 aa4.1□□□□□ -1.75
SHQ1-207ENST00000475558 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.75
SHQ1-207ENST00000475558 LINC00304Q8N9R0 145 aa4.09□□□□□ -1.75
SHQ1-207ENST00000475558 PRR26Q8N8Z3 221 aa4.08□□□□□ -1.76
SHQ1-207ENST00000475558 LINC00472Q9H8W2 130 aa4.08□□□□□ -1.76
SHQ1-207ENST00000475558 HRCT1Q6UXD1 115 aa4.06□□□□□ -1.76
SHQ1-207ENST00000475558 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
SHQ1-207ENST00000475558 A8MWP4 228 aa4.05□□□□□ -1.76
SHQ1-207ENST00000475558 SCGB1A1P11684 91 aa4.05□□□□□ -1.76
SHQ1-207ENST00000475558 LPAP08519 4548 aa4.04□□□□□ -1.76
SHQ1-207ENST00000475558 A0A0G2JQZ4 141 aa4.04□□□□□ -1.76
SHQ1-207ENST00000475558 IGKV4-1P06312 121 aa4.04□□□□□ -1.76
SHQ1-207ENST00000475558 IGKV3D-7A0A0C4DH55 119 aa4.03□□□□□ -1.76
SHQ1-207ENST00000475558 A0A0U1RQV1 116 aa4.03□□□□□ -1.76
SHQ1-207ENST00000475558 MT-ATP8P03928 68 aa4.03□□□□□ -1.76
SHQ1-207ENST00000475558 HIST1H4AP62805 103 aaKnown RBP4.03□□□□□ -1.76
SHQ1-207ENST00000475558 PRR15Q8IV56 129 aa4.03□□□□□ -1.76
SHQ1-207ENST00000475558 SMIM20Q8N5G0 67 aa4.03□□□□□ -1.76
SHQ1-207ENST00000475558 C8orf87E5RJ46 101 aa4.02□□□□□ -1.77
SHQ1-207ENST00000475558 DSCR10P59022 87 aa4.01□□□□□ -1.77
SHQ1-207ENST00000475558 C1orf195Q5TG92 126 aa4.01□□□□□ -1.77
SHQ1-207ENST00000475558 FP248Q71RG6 208 aaPredicted RBP4.01□□□□□ -1.77
SHQ1-207ENST00000475558 MUC2Q02817 5179 aa4□□□□□ -1.77
SHQ1-207ENST00000475558 Q96NJ1 140 aa4□□□□□ -1.77
SHQ1-207ENST00000475558 A0A1B0GVX0 72 aa3.99□□□□□ -1.77
SHQ1-207ENST00000475558 LINC00313P59037 77 aa3.99□□□□□ -1.77
SHQ1-207ENST00000475558 FAT4Q6V0I7 4981 aa3.98□□□□□ -1.77
SHQ1-207ENST00000475558 HCG22E2RYF7 251 aa3.98□□□□□ -1.77
SHQ1-207ENST00000475558 ATOX1O00244 68 aa3.98□□□□□ -1.77
SHQ1-207ENST00000475558 DEFB116Q30KQ4 102 aa3.98□□□□□ -1.77
SHQ1-207ENST00000475558 V9GYY9 64 aa3.98□□□□□ -1.77
SHQ1-207ENST00000475558 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
SHQ1-207ENST00000475558 IGHV6-1A0A0B4J1U7 121 aa3.96□□□□□ -1.78
SHQ1-207ENST00000475558 hDV103S1A0JD37 113 aa3.96□□□□□ -1.78
SHQ1-207ENST00000475558 K7EQZ3 153 aa3.96□□□□□ -1.78
SHQ1-207ENST00000475558 CASC2Q6XLA1 102 aa3.96□□□□□ -1.78
SHQ1-207ENST00000475558 C8orf17Q9NRJ1 99 aa3.96□□□□□ -1.78
SHQ1-207ENST00000475558 PRR4Q16378 134 aa3.95□□□□□ -1.78
SHQ1-207ENST00000475558 TMEM254Q8TBM7 123 aa3.95□□□□□ -1.78
SHQ1-207ENST00000475558 FAM236AA0A1B0GUQ0 79 aa3.94□□□□□ -1.78
SHQ1-207ENST00000475558 FAM236BA0A1B0GV22 79 aa3.94□□□□□ -1.78
SHQ1-207ENST00000475558 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
SHQ1-207ENST00000475558 UQCRQO14949 82 aa3.93□□□□□ -1.78
SHQ1-207ENST00000475558 Q8N9L7 120 aa3.93□□□□□ -1.78
SHQ1-207ENST00000475558 IGLV7-46A0A075B6I9 117 aa3.92□□□□□ -1.78
SHQ1-207ENST00000475558 TRAV7A0A075B6U4 112 aa3.92□□□□□ -1.78
SHQ1-207ENST00000475558 A0A087WVE0 104 aa3.92□□□□□ -1.78
SHQ1-207ENST00000475558 MMP24-AS1A0A0U1RRL7 71 aa3.91□□□□□ -1.78
SHQ1-207ENST00000475558 H3BPC8 53 aa3.91□□□□□ -1.78
SHQ1-207ENST00000475558 SERP2Q8N6R1 65 aa3.91□□□□□ -1.78
SHQ1-207ENST00000475558 ANAPC13Q9BS18 74 aa3.91□□□□□ -1.78
SHQ1-207ENST00000475558 WFDC13Q8IUB5 93 aa3.9□□□□□ -1.79
SHQ1-207ENST00000475558 Q8N9P0 234 aaPredicted RBP3.9□□□□□ -1.79
SHQ1-207ENST00000475558 MP68P56378 58 aa3.89□□□□□ -1.79
SHQ1-207ENST00000475558 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
SHQ1-207ENST00000475558 COX7CP15954 63 aa3.88□□□□□ -1.79
SHQ1-207ENST00000475558 OCR1Q9BZK8 76 aa3.88□□□□□ -1.79
SHQ1-207ENST00000475558 NDUFS5O43920 106 aa3.87□□□□□ -1.79
SHQ1-207ENST00000475558 TPRXLQ17RH7 258 aa3.87□□□□□ -1.79
SHQ1-207ENST00000475558 C20orf166-AS1Q96NR2 134 aa3.86□□□□□ -1.79
SHQ1-207ENST00000475558 A8MUU9 505 aa3.85□□□□□ -1.79
SHQ1-207ENST00000475558 NDUFC1O43677 76 aa3.85□□□□□ -1.79
SHQ1-207ENST00000475558 Q75L30 129 aa3.85□□□□□ -1.79
SHQ1-207ENST00000475558 NOTCH2NLQ7Z3S9 236 aa3.85□□□□□ -1.79
SHQ1-207ENST00000475558 RETNLBQ9BQ08 111 aa3.85□□□□□ -1.79
SHQ1-207ENST00000475558 MUC17Q685J3 4493 aa3.84□□□□□ -1.79
SHQ1-207ENST00000475558 KRTAP16-1A8MUX0 517 aa3.84□□□□□ -1.79
SHQ1-207ENST00000475558 ATP11AUNQ6ZP68 121 aa3.84□□□□□ -1.79
SHQ1-207ENST00000475558 TRAV22A0A0B4J277 110 aa3.83□□□□□ -1.8
SHQ1-207ENST00000475558 KRTAP13-3Q3SY46 172 aa3.83□□□□□ -1.8
SHQ1-207ENST00000475558 LOC101927531A0A1B0GV80 90 aa3.82□□□□□ -1.8
SHQ1-207ENST00000475558 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
SHQ1-207ENST00000475558 C9orf92A6NGG3 77 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms