RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 PMAIP1Q13794 54 aa7.49□□□□□ -1.21
RNF220-211ENST00000474956 IGLV7-46A0A075B6I9 117 aa7.48□□□□□ -1.21
RNF220-211ENST00000474956 TP53AIP1Q9HCN2 124 aa7.47□□□□□ -1.21
RNF220-211ENST00000474956 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.21
RNF220-211ENST00000474956 COA5Q86WW8 74 aa7.46□□□□□ -1.22
RNF220-211ENST00000474956 MOBPQ13875 183 aa7.45□□□□□ -1.22
RNF220-211ENST00000474956 PRR15LQ9BU68 103 aa7.45□□□□□ -1.22
RNF220-211ENST00000474956 ASB16-AS1Q495Z4 193 aa7.45□□□□□ -1.22
RNF220-211ENST00000474956 PLAC8Q9NZF1 115 aa7.45□□□□□ -1.22
RNF220-211ENST00000474956 Q96NJ1 140 aa7.44□□□□□ -1.22
RNF220-211ENST00000474956 VPS13BQ7Z7G8 4022 aa7.44□□□□□ -1.22
RNF220-211ENST00000474956 WWC2-AS2Q96NR7 200 aa7.42□□□□□ -1.22
RNF220-211ENST00000474956 C8orf17Q9NRJ1 99 aa7.42□□□□□ -1.22
RNF220-211ENST00000474956 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
RNF220-211ENST00000474956 PCOTHQ58A44 107 aa7.42□□□□□ -1.22
RNF220-211ENST00000474956 SACSQ9NZJ4 4579 aa7.41□□□□□ -1.22
RNF220-211ENST00000474956 A8MU10 97 aa7.41□□□□□ -1.22
RNF220-211ENST00000474956 CIRBP-AS1Q8TBR5 109 aa7.41□□□□□ -1.22
RNF220-211ENST00000474956 H3BS24 57 aa7.41□□□□□ -1.22
RNF220-211ENST00000474956 Q75L30 129 aa7.41□□□□□ -1.22
RNF220-211ENST00000474956 ZNF861PO60384 105 aa7.4□□□□□ -1.23
RNF220-211ENST00000474956 CD164Q04900 197 aa7.4□□□□□ -1.23
RNF220-211ENST00000474956 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
RNF220-211ENST00000474956 A0A1B0GVX0 72 aa7.38□□□□□ -1.23
RNF220-211ENST00000474956 KRTAP10-1P60331 282 aa7.38□□□□□ -1.23
RNF220-211ENST00000474956 NDUFS5O43920 106 aa7.37□□□□□ -1.23
RNF220-211ENST00000474956 IGHV6-1A0A0B4J1U7 121 aa7.37□□□□□ -1.23
RNF220-211ENST00000474956 A6NED7 52 aa7.36□□□□□ -1.23
RNF220-211ENST00000474956 CDK2AP2O75956 126 aa7.36□□□□□ -1.23
RNF220-211ENST00000474956 ZNF706Q9Y5V0 76 aaPredicted RBP7.36□□□□□ -1.23
RNF220-211ENST00000474956 IGLV7-43P04211 117 aa7.35□□□□□ -1.23
RNF220-211ENST00000474956 MRPL34Q9BQ48 92 aaKnown RBP7.35□□□□□ -1.23
RNF220-211ENST00000474956 LCA10Q71F78 164 aa7.34□□□□□ -1.23
RNF220-211ENST00000474956 LINC01558Q9Y6Z2 57 aa7.34□□□□□ -1.23
RNF220-211ENST00000474956 A0A087X002 238 aa7.34□□□□□ -1.23
RNF220-211ENST00000474956 ATP11AUNQ6ZP68 121 aa7.34□□□□□ -1.23
RNF220-211ENST00000474956 NOTCH2NLQ7Z3S9 236 aa7.34□□□□□ -1.23
RNF220-211ENST00000474956 SPTSSBQ8NFR3 76 aa7.32□□□□□ -1.24
RNF220-211ENST00000474956 SPAG11AQ6PDA7 123 aa7.32□□□□□ -1.24
RNF220-211ENST00000474956 SPINK6Q6UWN8 80 aa7.31□□□□□ -1.24
RNF220-211ENST00000474956 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
RNF220-211ENST00000474956 HRES1P13985 223 aa7.3□□□□□ -1.24
RNF220-211ENST00000474956 KMT2CQ8NEZ4 4911 aaKnown RBP7.29□□□□□ -1.24
RNF220-211ENST00000474956 KTN1-AS1Q86SY8 53 aa7.28□□□□□ -1.24
RNF220-211ENST00000474956 FAT1Q14517 4588 aa7.28□□□□□ -1.24
RNF220-211ENST00000474956 KRTAP21-3Q3LHN1 58 aa7.27□□□□□ -1.24
RNF220-211ENST00000474956 DYNC1H1Q14204 4646 aaKnown RBP7.27□□□□□ -1.25
RNF220-211ENST00000474956 Q6ZSA8 131 aa7.25□□□□□ -1.25
RNF220-211ENST00000474956 KRTAP13-2Q52LG2 175 aa7.24□□□□□ -1.25
RNF220-211ENST00000474956 A6NN06 94 aa7.24□□□□□ -1.25
RNF220-211ENST00000474956 Q5W150 140 aa7.21□□□□□ -1.25
RNF220-211ENST00000474956 KRTAP13-3Q3SY46 172 aa7.21□□□□□ -1.26
RNF220-211ENST00000474956 SPINK7P58062 85 aa7.21□□□□□ -1.26
RNF220-211ENST00000474956 ACYP2P14621 99 aa7.18□□□□□ -1.26
RNF220-211ENST00000474956 PRR26Q8N8Z3 221 aa7.18□□□□□ -1.26
RNF220-211ENST00000474956 SMR3BP02814 79 aaPredicted RBP7.17□□□□□ -1.26
RNF220-211ENST00000474956 RYR2Q92736 4967 aa7.17□□□□□ -1.26
RNF220-211ENST00000474956 C8orf87E5RJ46 101 aa7.17□□□□□ -1.26
RNF220-211ENST00000474956 KRTAP1-4P0C5Y4 121 aa7.17□□□□□ -1.26
RNF220-211ENST00000474956 APOBP04114 4563 aaKnown RBP7.16□□□□□ -1.26
RNF220-211ENST00000474956 C7orf65Q6ZTY9 151 aa7.14□□□□□ -1.27
RNF220-211ENST00000474956 RBM12B-AS1Q9P1G2 102 aa7.14□□□□□ -1.27
RNF220-211ENST00000474956 SSBP3-AS1Q7Z2R9 100 aa7.13□□□□□ -1.27
RNF220-211ENST00000474956 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
RNF220-211ENST00000474956 DMAC1Q96GE9 116 aa7.12□□□□□ -1.27
RNF220-211ENST00000474956 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
RNF220-211ENST00000474956 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
RNF220-211ENST00000474956 LINC00313P59037 77 aa7.09□□□□□ -1.27
RNF220-211ENST00000474956 RYR3Q15413 4870 aa7.06□□□□□ -1.28
RNF220-211ENST00000474956 IGKV2-30P06310 120 aa7.05□□□□□ -1.28
RNF220-211ENST00000474956 A0A1B0GU69 56 aa7.04□□□□□ -1.28
RNF220-211ENST00000474956 LRP1Q07954 4544 aaKnown RBP7.03□□□□□ -1.28
RNF220-211ENST00000474956 TYMSOSQ8TAI1 123 aa7.02□□□□□ -1.28
RNF220-211ENST00000474956 A0A1B0GVY2 172 aa7.01□□□□□ -1.29
RNF220-211ENST00000474956 PKHD1L1Q86WI1 4243 aa7.01□□□□□ -1.29
RNF220-211ENST00000474956 KRTAP16-1A8MUX0 517 aa6.98□□□□□ -1.29
RNF220-211ENST00000474956 SPATA8Q6RVD6 105 aa6.98□□□□□ -1.29
RNF220-211ENST00000474956 KRTAP10-4P60372 401 aaPredicted RBP6.96□□□□□ -1.3
RNF220-211ENST00000474956 UQCR11O14957 56 aa6.94□□□□□ -1.3
RNF220-211ENST00000474956 IGKV2D-30A0A075B6S6 120 aa6.93□□□□□ -1.3
RNF220-211ENST00000474956 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
RNF220-211ENST00000474956 HSPG2P98160 4391 aa6.93□□□□□ -1.3
RNF220-211ENST00000474956 FLG2Q5D862 2391 aaPredicted RBP6.92□□□□□ -1.3
RNF220-211ENST00000474956 LINC00304Q8N9R0 145 aa6.91□□□□□ -1.3
RNF220-211ENST00000474956 PRAC1Q96KF2 57 aa6.89□□□□□ -1.31
RNF220-211ENST00000474956 SPINK1P00995 79 aa6.89□□□□□ -1.31
RNF220-211ENST00000474956 MYCBP2O75592 4640 aa6.89□□□□□ -1.31
RNF220-211ENST00000474956 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
RNF220-211ENST00000474956 KIAA1109Q2LD37 5005 aa6.87□□□□□ -1.31
RNF220-211ENST00000474956 KRTAP17-1Q9BYP8 105 aa6.86□□□□□ -1.31
RNF220-211ENST00000474956 ADM2Q7Z4H4 148 aa6.86□□□□□ -1.31
RNF220-211ENST00000474956 TNXBP22105 4242 aa6.85□□□□□ -1.31
RNF220-211ENST00000474956 DMBT1Q9UGM3 2413 aaPredicted RBP6.83□□□□□ -1.32
RNF220-211ENST00000474956 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
RNF220-211ENST00000474956 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
RNF220-211ENST00000474956 RYR1P21817 5038 aa6.8□□□□□ -1.32
RNF220-211ENST00000474956 LINC01554Q52M75 96 aa6.77□□□□□ -1.33
RNF220-211ENST00000474956 Q8N1X5 172 aa6.76□□□□□ -1.33
RNF220-211ENST00000474956 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
RNF220-211ENST00000474956 RPS29P62273 56 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms