RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 Q5XG85 94 aa11.63□□□□□ -0.55
EDEM3-206ENST00000474725 FLG2Q5D862 2391 aaPredicted RBP11.63□□□□□ -0.55
EDEM3-206ENST00000474725 FAT3Q8TDW7 4589 aa11.62□□□□□ -0.55
EDEM3-206ENST00000474725 LIMD2Q9BT23 127 aa11.62□□□□□ -0.55
EDEM3-206ENST00000474725 ASB16-AS1Q495Z4 193 aa11.61□□□□□ -0.55
EDEM3-206ENST00000474725 HERC2O95714 4834 aa11.6□□□□□ -0.55
EDEM3-206ENST00000474725 RPS29P62273 56 aaKnown RBP11.58□□□□□ -0.55
EDEM3-206ENST00000474725 SNURFQ9Y675 71 aa11.58□□□□□ -0.56
EDEM3-206ENST00000474725 H7BZZ5 65 aa11.57□□□□□ -0.56
EDEM3-206ENST00000474725 MT1HL1P0DM35 61 aa11.57□□□□□ -0.56
EDEM3-206ENST00000474725 TNXBP22105 4242 aa11.57□□□□□ -0.56
EDEM3-206ENST00000474725 HCG22E2RYF7 251 aa11.56□□□□□ -0.56
EDEM3-206ENST00000474725 TMEM254Q8TBM7 123 aa11.56□□□□□ -0.56
EDEM3-206ENST00000474725 NDUFC1O43677 76 aa11.56□□□□□ -0.56
EDEM3-206ENST00000474725 C1orf195Q5TG92 126 aa11.56□□□□□ -0.56
EDEM3-206ENST00000474725 J3KT08 172 aa11.55□□□□□ -0.56
EDEM3-206ENST00000474725 OXTP01178 125 aa11.55□□□□□ -0.56
EDEM3-206ENST00000474725 RPS28P62857 69 aaKnown RBP11.54□□□□□ -0.56
EDEM3-206ENST00000474725 MYCBP2O75592 4640 aa11.53□□□□□ -0.56
EDEM3-206ENST00000474725 A8MWP4 228 aa11.5□□□□□ -0.57
EDEM3-206ENST00000474725 FAM236DA0A1B0GTK5 79 aa11.5□□□□□ -0.57
EDEM3-206ENST00000474725 FAM236CP0DP71 79 aa11.5□□□□□ -0.57
EDEM3-206ENST00000474725 A0A0U1RQV1 116 aa11.48□□□□□ -0.57
EDEM3-206ENST00000474725 PRR15Q8IV56 129 aa11.48□□□□□ -0.57
EDEM3-206ENST00000474725 KRTAP29-1A8MX34 341 aaPredicted RBP11.47□□□□□ -0.57
EDEM3-206ENST00000474725 ABCA13Q86UQ4 5058 aa11.47□□□□□ -0.57
EDEM3-206ENST00000474725 NDUFB1O75438 58 aa11.46□□□□□ -0.58
EDEM3-206ENST00000474725 WFDC13Q8IUB5 93 aa11.44□□□□□ -0.58
EDEM3-206ENST00000474725 A0A1B0GVX0 72 aa11.42□□□□□ -0.58
EDEM3-206ENST00000474725 RETNLBQ9BQ08 111 aa11.42□□□□□ -0.58
EDEM3-206ENST00000474725 IGHV6-1A0A0B4J1U7 121 aa11.41□□□□□ -0.58
EDEM3-206ENST00000474725 ATP5EP56381 51 aaPredicted RBP11.41□□□□□ -0.58
EDEM3-206ENST00000474725 C5orf47Q569G3 176 aa11.41□□□□□ -0.58
EDEM3-206ENST00000474725 CASC2Q6XLA1 102 aa11.39□□□□□ -0.59
EDEM3-206ENST00000474725 DMBT1Q9UGM3 2413 aaPredicted RBP11.36□□□□□ -0.59
EDEM3-206ENST00000474725 NOTCH2NLQ7Z3S9 236 aa11.35□□□□□ -0.59
EDEM3-206ENST00000474725 MMP24-AS1A0A0U1RRL7 71 aa11.35□□□□□ -0.59
EDEM3-206ENST00000474725 C8orf17Q9NRJ1 99 aa11.35□□□□□ -0.59
EDEM3-206ENST00000474725 SERP1Q9Y6X1 66 aa11.35□□□□□ -0.59
EDEM3-206ENST00000474725 J3QL48 77 aa11.32□□□□□ -0.6
EDEM3-206ENST00000474725 ZCCHC13Q8WW36 166 aaKnown RBP11.32□□□□□ -0.6
EDEM3-206ENST00000474725 MP68P56378 58 aa11.29□□□□□ -0.6
EDEM3-206ENST00000474725 C8orf87E5RJ46 101 aa11.29□□□□□ -0.6
EDEM3-206ENST00000474725 hDV103S1A0JD37 113 aa11.28□□□□□ -0.6
EDEM3-206ENST00000474725 LINC00313P59037 77 aa11.28□□□□□ -0.6
EDEM3-206ENST00000474725 H3BPC8 53 aa11.23□□□□□ -0.61
EDEM3-206ENST00000474725 FP248Q71RG6 208 aaPredicted RBP11.23□□□□□ -0.61
EDEM3-206ENST00000474725 H0Y9P7 68 aa11.21□□□□□ -0.61
EDEM3-206ENST00000474725 MRPL34Q9BQ48 92 aaKnown RBP11.2□□□□□ -0.62
EDEM3-206ENST00000474725 C9orf92A6NGG3 77 aa11.19□□□□□ -0.62
EDEM3-206ENST00000474725 LINC00208Q96KT6 92 aa11.19□□□□□ -0.62
EDEM3-206ENST00000474725 IGLV7-46A0A075B6I9 117 aa11.18□□□□□ -0.62
EDEM3-206ENST00000474725 KRTAP16-1A8MUX0 517 aa11.18□□□□□ -0.62
EDEM3-206ENST00000474725 TP53AIP1Q9HCN2 124 aa11.18□□□□□ -0.62
EDEM3-206ENST00000474725 TRAV22A0A0B4J277 110 aa11.17□□□□□ -0.62
EDEM3-206ENST00000474725 PRR4Q16378 134 aa11.17□□□□□ -0.62
EDEM3-206ENST00000474725 SMIM26A0A096LP01 95 aa11.12□□□□□ -0.63
EDEM3-206ENST00000474725 NDUFS5O43920 106 aa11.12□□□□□ -0.63
EDEM3-206ENST00000474725 PCLOQ9Y6V0 5065 aa11.12□□□□□ -0.63
EDEM3-206ENST00000474725 C1orf64Q8NEQ6 169 aa11.11□□□□□ -0.63
EDEM3-206ENST00000474725 Q8N9P0 234 aaPredicted RBP11.09□□□□□ -0.63
EDEM3-206ENST00000474725 CYP4F30PQ9H0H9 118 aa11.08□□□□□ -0.64
EDEM3-206ENST00000474725 KRTAP13-3Q3SY46 172 aa11.07□□□□□ -0.64
EDEM3-206ENST00000474725 SPANXA2-OT1Q8N9U9 137 aa11.05□□□□□ -0.64
EDEM3-206ENST00000474725 C4orf26Q17RF5 130 aa11□□□□□ -0.65
EDEM3-206ENST00000474725 C20orf166-AS1Q96NR2 134 aa11□□□□□ -0.65
EDEM3-206ENST00000474725 A8MUU9 505 aa10.99□□□□□ -0.65
EDEM3-206ENST00000474725 TPRXLQ17RH7 258 aa10.98□□□□□ -0.65
EDEM3-206ENST00000474725 XP32Q5T750 250 aa10.96□□□□□ -0.65
EDEM3-206ENST00000474725 Q5W150 140 aa10.96□□□□□ -0.65
EDEM3-206ENST00000474725 Q75L30 129 aa10.93□□□□□ -0.66
EDEM3-206ENST00000474725 PCOTHQ58A44 107 aa10.89□□□□□ -0.67
EDEM3-206ENST00000474725 LOC101927531A0A1B0GV80 90 aa10.88□□□□□ -0.67
EDEM3-206ENST00000474725 RPL37P61927 97 aaKnown RBP10.87□□□□□ -0.67
EDEM3-206ENST00000474725 MPLKIPQ8TAP9 179 aa10.86□□□□□ -0.67
EDEM3-206ENST00000474725 LPAP08519 4548 aa10.85□□□□□ -0.67
EDEM3-206ENST00000474725 SVIPQ8NHG7 77 aa10.83□□□□□ -0.68
EDEM3-206ENST00000474725 HERC1Q15751 4861 aa10.82□□□□□ -0.68
EDEM3-206ENST00000474725 ATP11AUNQ6ZP68 121 aa10.8□□□□□ -0.68
EDEM3-206ENST00000474725 Q1T7F1 81 aa10.79□□□□□ -0.68
EDEM3-206ENST00000474725 COA5Q86WW8 74 aa10.74□□□□□ -0.69
EDEM3-206ENST00000474725 IGKV2-30P06310 120 aa10.73□□□□□ -0.69
EDEM3-206ENST00000474725 LRP2P98164 4655 aa10.72□□□□□ -0.69
EDEM3-206ENST00000474725 V9GYY9 64 aa10.72□□□□□ -0.69
EDEM3-206ENST00000474725 IGKV2D-30A0A075B6S6 120 aa10.71□□□□□ -0.69
EDEM3-206ENST00000474725 HMCN2Q8NDA2 5059 aa10.67□□□□□ -0.7
EDEM3-206ENST00000474725 C7orf65Q6ZTY9 151 aa10.64□□□□□ -0.71
EDEM3-206ENST00000474725 SPINK7P58062 85 aa10.63□□□□□ -0.71
EDEM3-206ENST00000474725 HRES1P13985 223 aa10.62□□□□□ -0.71
EDEM3-206ENST00000474725 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
EDEM3-206ENST00000474725 PSPHP1O15172 72 aa10.58□□□□□ -0.72
EDEM3-206ENST00000474725 ACYP2P14621 99 aa10.56□□□□□ -0.72
EDEM3-206ENST00000474725 DMAC1Q96GE9 116 aa10.55□□□□□ -0.72
EDEM3-206ENST00000474725 PRO0628Q9UI54 55 aa10.54□□□□□ -0.72
EDEM3-206ENST00000474725 BRK1Q8WUW1 75 aa10.53□□□□□ -0.72
EDEM3-206ENST00000474725 A8MUN3 132 aa10.52□□□□□ -0.72
EDEM3-206ENST00000474725 MUC17Q685J3 4493 aa10.49□□□□□ -0.73
EDEM3-206ENST00000474725 Q5VV11 94 aa10.48□□□□□ -0.73
EDEM3-206ENST00000474725 PRR15LQ9BU68 103 aa10.47□□□□□ -0.73
EDEM3-206ENST00000474725 KRTAP4-1Q9BYQ7 146 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms