RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 DEFB116Q30KQ4 102 aa12.55□□□□□ -0.4
SMIM11A-204ENST00000474455 KRTAP13-1Q8IUC0 172 aa12.55□□□□□ -0.4
SMIM11A-204ENST00000474455 CASC2Q6XLA1 102 aa12.55□□□□□ -0.4
SMIM11A-204ENST00000474455 A8MWP4 228 aa12.54□□□□□ -0.4
SMIM11A-204ENST00000474455 LINC00208Q96KT6 92 aa12.51□□□□□ -0.41
SMIM11A-204ENST00000474455 LINC00472Q9H8W2 130 aa12.51□□□□□ -0.41
SMIM11A-204ENST00000474455 H0Y9P7 68 aa12.51□□□□□ -0.41
SMIM11A-204ENST00000474455 IGLV7-43P04211 117 aa12.51□□□□□ -0.41
SMIM11A-204ENST00000474455 KRTAP17-1Q9BYP8 105 aa12.51□□□□□ -0.41
SMIM11A-204ENST00000474455 RPL37AP61513 92 aaKnown RBP12.5□□□□□ -0.41
SMIM11A-204ENST00000474455 C1orf195Q5TG92 126 aa12.49□□□□□ -0.41
SMIM11A-204ENST00000474455 CDK2AP2O75956 126 aa12.48□□□□□ -0.41
SMIM11A-204ENST00000474455 ZNF861PO60384 105 aa12.46□□□□□ -0.41
SMIM11A-204ENST00000474455 BIRC6Q9NR09 4857 aa12.45□□□□□ -0.42
SMIM11A-204ENST00000474455 PRR4Q16378 134 aa12.44□□□□□ -0.42
SMIM11A-204ENST00000474455 KRTAP10-4P60372 401 aaPredicted RBP12.44□□□□□ -0.42
SMIM11A-204ENST00000474455 PKHD1L1Q86WI1 4243 aa12.38□□□□□ -0.43
SMIM11A-204ENST00000474455 MMP24-AS1A0A0U1RRL7 71 aa12.38□□□□□ -0.43
SMIM11A-204ENST00000474455 PSPHP1O15172 72 aa12.37□□□□□ -0.43
SMIM11A-204ENST00000474455 ANAPC11Q9NYG5 84 aa12.36□□□□□ -0.43
SMIM11A-204ENST00000474455 LIMD2Q9BT23 127 aa12.36□□□□□ -0.43
SMIM11A-204ENST00000474455 TP53AIP1Q9HCN2 124 aa12.35□□□□□ -0.43
SMIM11A-204ENST00000474455 Q5VSD8 79 aa12.34□□□□□ -0.43
SMIM11A-204ENST00000474455 FAM229AH3BQW9 127 aa12.32□□□□□ -0.44
SMIM11A-204ENST00000474455 MOBPQ13875 183 aa12.32□□□□□ -0.44
SMIM11A-204ENST00000474455 ASB16-AS1Q495Z4 193 aa12.31□□□□□ -0.44
SMIM11A-204ENST00000474455 IGLV7-46A0A075B6I9 117 aa12.3□□□□□ -0.44
SMIM11A-204ENST00000474455 A8MUN3 132 aa12.3□□□□□ -0.44
SMIM11A-204ENST00000474455 Q8N9P0 234 aaPredicted RBP12.3□□□□□ -0.44
SMIM11A-204ENST00000474455 Q5VV11 94 aa12.27□□□□□ -0.44
SMIM11A-204ENST00000474455 PLA2G1BP04054 148 aaKnown RBP12.27□□□□□ -0.45
SMIM11A-204ENST00000474455 LINC00483Q53H64 154 aa12.25□□□□□ -0.45
SMIM11A-204ENST00000474455 SPINK6Q6UWN8 80 aa12.25□□□□□ -0.45
SMIM11A-204ENST00000474455 Q8N1X5 172 aa12.25□□□□□ -0.45
SMIM11A-204ENST00000474455 Q96NJ1 140 aa12.25□□□□□ -0.45
SMIM11A-204ENST00000474455 LRP1Q07954 4544 aaKnown RBP12.25□□□□□ -0.45
SMIM11A-204ENST00000474455 KRTAP1-4P0C5Y4 121 aa12.23□□□□□ -0.45
SMIM11A-204ENST00000474455 ZNF706Q9Y5V0 76 aaPredicted RBP12.23□□□□□ -0.45
SMIM11A-204ENST00000474455 HERC2O95714 4834 aa12.22□□□□□ -0.45
SMIM11A-204ENST00000474455 C8orf17Q9NRJ1 99 aa12.21□□□□□ -0.45
SMIM11A-204ENST00000474455 COA5Q86WW8 74 aa12.21□□□□□ -0.46
SMIM11A-204ENST00000474455 KRTAP4-5Q9BYR2 181 aa12.2□□□□□ -0.46
SMIM11A-204ENST00000474455 A0A087X002 238 aa12.19□□□□□ -0.46
SMIM11A-204ENST00000474455 IGLV9-49A0A0B4J1Y8 123 aa12.19□□□□□ -0.46
SMIM11A-204ENST00000474455 PMAIP1Q13794 54 aa12.19□□□□□ -0.46
SMIM11A-204ENST00000474455 LOC101927531A0A1B0GV80 90 aa12.18□□□□□ -0.46
SMIM11A-204ENST00000474455 FLG2Q5D862 2391 aaPredicted RBP12.18□□□□□ -0.46
SMIM11A-204ENST00000474455 FAT3Q8TDW7 4589 aa12.18□□□□□ -0.46
SMIM11A-204ENST00000474455 PRR15LQ9BU68 103 aa12.17□□□□□ -0.46
SMIM11A-204ENST00000474455 A0A1B0GVX0 72 aa12.17□□□□□ -0.46
SMIM11A-204ENST00000474455 Q75L30 129 aa12.17□□□□□ -0.46
SMIM11A-204ENST00000474455 CHKB-CPT1BH3BT56 60 aa12.16□□□□□ -0.46
SMIM11A-204ENST00000474455 MYCBP2O75592 4640 aa12.15□□□□□ -0.47
SMIM11A-204ENST00000474455 KRTAP13-2Q52LG2 175 aa12.14□□□□□ -0.47
SMIM11A-204ENST00000474455 ABCA13Q86UQ4 5058 aa12.14□□□□□ -0.47
SMIM11A-204ENST00000474455 CD164Q04900 197 aa12.12□□□□□ -0.47
SMIM11A-204ENST00000474455 TNXBP22105 4242 aa12.11□□□□□ -0.47
SMIM11A-204ENST00000474455 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
SMIM11A-204ENST00000474455 PCOTHQ58A44 107 aa12.09□□□□□ -0.47
SMIM11A-204ENST00000474455 PRR26Q8N8Z3 221 aa12.09□□□□□ -0.47
SMIM11A-204ENST00000474455 IGHV6-1A0A0B4J1U7 121 aa12.07□□□□□ -0.48
SMIM11A-204ENST00000474455 LINC01558Q9Y6Z2 57 aa12.07□□□□□ -0.48
SMIM11A-204ENST00000474455 NDUFS5O43920 106 aa12.05□□□□□ -0.48
SMIM11A-204ENST00000474455 SEC61GP60059 68 aa12.03□□□□□ -0.48
SMIM11A-204ENST00000474455 ATP11AUNQ6ZP68 121 aa12.02□□□□□ -0.48
SMIM11A-204ENST00000474455 A6NED7 52 aa12□□□□□ -0.49
SMIM11A-204ENST00000474455 TYMSOSQ8TAI1 123 aa11.98□□□□□ -0.49
SMIM11A-204ENST00000474455 CDC42SE1Q9NRR8 79 aa11.97□□□□□ -0.49
SMIM11A-204ENST00000474455 HRES1P13985 223 aa11.96□□□□□ -0.49
SMIM11A-204ENST00000474455 LCA10Q71F78 164 aa11.96□□□□□ -0.49
SMIM11A-204ENST00000474455 A8MU10 97 aa11.95□□□□□ -0.5
SMIM11A-204ENST00000474455 SSBP3-AS1Q7Z2R9 100 aa11.95□□□□□ -0.5
SMIM11A-204ENST00000474455 SPAG11AQ6PDA7 123 aa11.92□□□□□ -0.5
SMIM11A-204ENST00000474455 C8orf87E5RJ46 101 aa11.9□□□□□ -0.5
SMIM11A-204ENST00000474455 KRTAP13-3Q3SY46 172 aa11.89□□□□□ -0.51
SMIM11A-204ENST00000474455 KRTAP10-8P60410 259 aa11.89□□□□□ -0.51
SMIM11A-204ENST00000474455 NOTCH2NLQ7Z3S9 236 aa11.89□□□□□ -0.51
SMIM11A-204ENST00000474455 KTN1-AS1Q86SY8 53 aa11.88□□□□□ -0.51
SMIM11A-204ENST00000474455 SPTSSBQ8NFR3 76 aa11.87□□□□□ -0.51
SMIM11A-204ENST00000474455 PCLOQ9Y6V0 5065 aa11.85□□□□□ -0.51
SMIM11A-204ENST00000474455 MT1HL1P0DM35 61 aa11.85□□□□□ -0.51
SMIM11A-204ENST00000474455 DMBT1Q9UGM3 2413 aaPredicted RBP11.84□□□□□ -0.51
SMIM11A-204ENST00000474455 LINC00304Q8N9R0 145 aa11.83□□□□□ -0.52
SMIM11A-204ENST00000474455 A6NN06 94 aa11.82□□□□□ -0.52
SMIM11A-204ENST00000474455 ACYP2P14621 99 aa11.8□□□□□ -0.52
SMIM11A-204ENST00000474455 Q5W150 140 aa11.8□□□□□ -0.52
SMIM11A-204ENST00000474455 C4orf48Q5BLP8 95 aa11.78□□□□□ -0.52
SMIM11A-204ENST00000474455 SPINK1P00995 79 aa11.73□□□□□ -0.53
SMIM11A-204ENST00000474455 SPINK7P58062 85 aa11.73□□□□□ -0.53
SMIM11A-204ENST00000474455 DMAC1Q96GE9 116 aa11.72□□□□□ -0.53
SMIM11A-204ENST00000474455 LINC00313P59037 77 aa11.68□□□□□ -0.54
SMIM11A-204ENST00000474455 C7orf65Q6ZTY9 151 aa11.66□□□□□ -0.54
SMIM11A-204ENST00000474455 RETNLBQ9BQ08 111 aa11.63□□□□□ -0.55
SMIM11A-204ENST00000474455 IGKV2-30P06310 120 aa11.62□□□□□ -0.55
SMIM11A-204ENST00000474455 RPS29P62273 56 aaKnown RBP11.62□□□□□ -0.55
SMIM11A-204ENST00000474455 J3QL48 77 aa11.59□□□□□ -0.55
SMIM11A-204ENST00000474455 RBM12B-AS1Q9P1G2 102 aa11.58□□□□□ -0.56
SMIM11A-204ENST00000474455 HERC1Q15751 4861 aa11.52□□□□□ -0.57
SMIM11A-204ENST00000474455 A0A1B0GU69 56 aa11.52□□□□□ -0.57
SMIM11A-204ENST00000474455 KRTAP16-1A8MUX0 517 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms