RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 M0R2T5 61 aa5.79□□□□□ -1.48
CKS1B-206ENST00000474215 SMIM6P0DI80 62 aa5.79□□□□□ -1.48
CKS1B-206ENST00000474215 C9JAW5 83 aa5.78□□□□□ -1.48
CKS1B-206ENST00000474215 ATXN8Q156A1 80 aa5.78□□□□□ -1.48
CKS1B-206ENST00000474215 NAA38Q9BRA0 125 aaKnown RBP5.78□□□□□ -1.48
CKS1B-206ENST00000474215 KRTAP16-1A8MUX0 517 aa5.77□□□□□ -1.49
CKS1B-206ENST00000474215 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
CKS1B-206ENST00000474215 NOTCH2NLQ7Z3S9 236 aa5.77□□□□□ -1.49
CKS1B-206ENST00000474215 IGHV6-1A0A0B4J1U7 121 aa5.76□□□□□ -1.49
CKS1B-206ENST00000474215 C21orf62-AS1Q17RA5 79 aa5.76□□□□□ -1.49
CKS1B-206ENST00000474215 JMJD7-PLA2G4BH0Y9G9 81 aa5.74□□□□□ -1.49
CKS1B-206ENST00000474215 Q6ZQT0 140 aa5.74□□□□□ -1.49
CKS1B-206ENST00000474215 TRBV20-1A0A075B6N2 111 aa5.73□□□□□ -1.49
CKS1B-206ENST00000474215 A0A1B0GVX0 72 aa5.73□□□□□ -1.49
CKS1B-206ENST00000474215 TSTD3H0UI37 97 aa5.73□□□□□ -1.49
CKS1B-206ENST00000474215 J3KT08 172 aa5.73□□□□□ -1.49
CKS1B-206ENST00000474215 C8orf87E5RJ46 101 aa5.72□□□□□ -1.49
CKS1B-206ENST00000474215 LOC110117498A0A087WWA1 95 aa5.71□□□□□ -1.5
CKS1B-206ENST00000474215 A0A1B0GW54 56 aa5.71□□□□□ -1.5
CKS1B-206ENST00000474215 LYRM7Q5U5X0 104 aa5.71□□□□□ -1.5
CKS1B-206ENST00000474215 PDE6GP18545 87 aa5.7□□□□□ -1.5
CKS1B-206ENST00000474215 BATFQ16520 125 aa5.7□□□□□ -1.5
CKS1B-206ENST00000474215 FLGP20930 4061 aaPredicted RBP5.68□□□□□ -1.5
CKS1B-206ENST00000474215 NDUFB1O75438 58 aa5.68□□□□□ -1.5
CKS1B-206ENST00000474215 FSIP2Q5CZC0 6907 aa5.67□□□□□ -1.5
CKS1B-206ENST00000474215 LOC105371267A0A1B0GV96 52 aa5.67□□□□□ -1.5
CKS1B-206ENST00000474215 C14orf132Q9NPU4 83 aa5.67□□□□□ -1.5
CKS1B-206ENST00000474215 C9orf118A6NHY6 69 aa5.65□□□□□ -1.5
CKS1B-206ENST00000474215 LCE1DQ5T752 114 aa5.65□□□□□ -1.5
CKS1B-206ENST00000474215 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.5
CKS1B-206ENST00000474215 A8MWP4 228 aa5.64□□□□□ -1.51
CKS1B-206ENST00000474215 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
CKS1B-206ENST00000474215 FAM236DA0A1B0GTK5 79 aa5.63□□□□□ -1.51
CKS1B-206ENST00000474215 TAX1BP3O14907 124 aa5.63□□□□□ -1.51
CKS1B-206ENST00000474215 FAM236CP0DP71 79 aa5.63□□□□□ -1.51
CKS1B-206ENST00000474215 HRES1P13985 223 aa5.63□□□□□ -1.51
CKS1B-206ENST00000474215 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
CKS1B-206ENST00000474215 ZCCHC13Q8WW36 166 aaKnown RBP5.63□□□□□ -1.51
CKS1B-206ENST00000474215 RBM12B-AS1Q9P1G2 102 aa5.63□□□□□ -1.51
CKS1B-206ENST00000474215 IGKV3D-7A0A0C4DH55 119 aa5.62□□□□□ -1.51
CKS1B-206ENST00000474215 A0A1W2PPM0 123 aa5.62□□□□□ -1.51
CKS1B-206ENST00000474215 NREPQ16612 68 aa5.62□□□□□ -1.51
CKS1B-206ENST00000474215 Q8N9P0 234 aaPredicted RBP5.62□□□□□ -1.51
CKS1B-206ENST00000474215 C8orf17Q9NRJ1 99 aa5.62□□□□□ -1.51
CKS1B-206ENST00000474215 H3BT86 120 aa5.61□□□□□ -1.51
CKS1B-206ENST00000474215 SPINK7P58062 85 aa5.59□□□□□ -1.51
CKS1B-206ENST00000474215 PRR15Q8IV56 129 aa5.59□□□□□ -1.51
CKS1B-206ENST00000474215 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
CKS1B-206ENST00000474215 Q6ZVQ6 151 aa5.58□□□□□ -1.52
CKS1B-206ENST00000474215 MTURNQ8N3F0 131 aa5.58□□□□□ -1.52
CKS1B-206ENST00000474215 SPCS1Q9Y6A9 102 aa5.54□□□□□ -1.52
CKS1B-206ENST00000474215 MMP24-AS1A0A0U1RRL7 71 aa5.53□□□□□ -1.52
CKS1B-206ENST00000474215 TMEM254Q8TBM7 123 aa5.53□□□□□ -1.52
CKS1B-206ENST00000474215 MRPL34Q9BQ48 92 aaKnown RBP5.53□□□□□ -1.52
CKS1B-206ENST00000474215 K7EQZ3 153 aa5.52□□□□□ -1.53
CKS1B-206ENST00000474215 BPY2O14599 106 aa5.52□□□□□ -1.53
CKS1B-206ENST00000474215 hDV103S1A0JD37 113 aa5.51□□□□□ -1.53
CKS1B-206ENST00000474215 COL5A1-AS1Q5SY13 56 aa5.51□□□□□ -1.53
CKS1B-206ENST00000474215 MT2AP02795 61 aa5.5□□□□□ -1.53
CKS1B-206ENST00000474215 NDUFS5O43920 106 aa5.48□□□□□ -1.53
CKS1B-206ENST00000474215 WFDC13Q8IUB5 93 aa5.48□□□□□ -1.53
CKS1B-206ENST00000474215 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
CKS1B-206ENST00000474215 PRO0461Q9UI25 63 aa5.46□□□□□ -1.54
CKS1B-206ENST00000474215 MT1FP04733 61 aa5.45□□□□□ -1.54
CKS1B-206ENST00000474215 Q8N9L7 120 aa5.45□□□□□ -1.54
CKS1B-206ENST00000474215 K7EP34 96 aa5.44□□□□□ -1.54
CKS1B-206ENST00000474215 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
CKS1B-206ENST00000474215 CASC2Q6XLA1 102 aa5.44□□□□□ -1.54
CKS1B-206ENST00000474215 USH2AO75445 5202 aa5.43□□□□□ -1.54
CKS1B-206ENST00000474215 Q5W150 140 aa5.43□□□□□ -1.54
CKS1B-206ENST00000474215 UBL5Q9BZL1 73 aa5.42□□□□□ -1.54
CKS1B-206ENST00000474215 LINC00846Q9NV44 126 aa5.42□□□□□ -1.54
CKS1B-206ENST00000474215 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
CKS1B-206ENST00000474215 IGKV2D-30A0A075B6S6 120 aa5.4□□□□□ -1.54
CKS1B-206ENST00000474215 HCG22E2RYF7 251 aa5.4□□□□□ -1.54
CKS1B-206ENST00000474215 IGKV2-30P06310 120 aa5.4□□□□□ -1.54
CKS1B-206ENST00000474215 H1FX-AS1Q4G0G2 97 aa5.39□□□□□ -1.55
CKS1B-206ENST00000474215 GTF2H5Q6ZYL4 71 aa5.39□□□□□ -1.55
CKS1B-206ENST00000474215 CXCL6P80162 114 aa5.38□□□□□ -1.55
CKS1B-206ENST00000474215 C7orf65Q6ZTY9 151 aa5.38□□□□□ -1.55
CKS1B-206ENST00000474215 SSPOA2VEC9 5147 aa5.37□□□□□ -1.55
CKS1B-206ENST00000474215 F8W1H4 67 aa5.37□□□□□ -1.55
CKS1B-206ENST00000474215 PCP4L1A6NKN8 68 aa5.36□□□□□ -1.55
CKS1B-206ENST00000474215 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
CKS1B-206ENST00000474215 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
CKS1B-206ENST00000474215 ETDBQ3ZM63 59 aa5.33□□□□□ -1.56
CKS1B-206ENST00000474215 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
CKS1B-206ENST00000474215 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
CKS1B-206ENST00000474215 H3BS24 57 aa5.28□□□□□ -1.56
CKS1B-206ENST00000474215 TP53AIP1Q9HCN2 124 aa5.28□□□□□ -1.56
CKS1B-206ENST00000474215 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
CKS1B-206ENST00000474215 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
CKS1B-206ENST00000474215 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
CKS1B-206ENST00000474215 ACYP1P07311 99 aa5.23□□□□□ -1.57
CKS1B-206ENST00000474215 C1orf64Q8NEQ6 169 aa5.22□□□□□ -1.57
CKS1B-206ENST00000474215 C5orf47Q569G3 176 aa5.21□□□□□ -1.58
CKS1B-206ENST00000474215 KRTAP19-6Q3LI70 58 aa5.19□□□□□ -1.58
CKS1B-206ENST00000474215 S4R3F8 94 aa5.19□□□□□ -1.58
CKS1B-206ENST00000474215 FAM240AA0A1B0GVK7 77 aa5.18□□□□□ -1.58
CKS1B-206ENST00000474215 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms