RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 VPS25Q9BRG1 176 aa8□□□□□ -1.13
CLIC3-201ENST00000473911 LINC00472Q9H8W2 130 aa7.98□□□□□ -1.13
CLIC3-201ENST00000473911 IGHV6-1A0A0B4J1U7 121 aa7.97□□□□□ -1.13
CLIC3-201ENST00000473911 RBM3P98179 157 aaKnown RBP7.97□□□□□ -1.13
CLIC3-201ENST00000473911 DSCR8Q96T75 97 aa7.97□□□□□ -1.13
CLIC3-201ENST00000473911 KRTAP16-1A8MUX0 517 aa7.96□□□□□ -1.14
CLIC3-201ENST00000473911 GTF2H5Q6ZYL4 71 aa7.96□□□□□ -1.14
CLIC3-201ENST00000473911 NOTCH2NLQ7Z3S9 236 aa7.95□□□□□ -1.14
CLIC3-201ENST00000473911 A0A1W2PPM0 123 aa7.93□□□□□ -1.14
CLIC3-201ENST00000473911 BAALC-AS2P0C853 105 aa7.93□□□□□ -1.14
CLIC3-201ENST00000473911 LYRM7Q5U5X0 104 aa7.92□□□□□ -1.14
CLIC3-201ENST00000473911 FAM236DA0A1B0GTK5 79 aa7.91□□□□□ -1.14
CLIC3-201ENST00000473911 C9JAW5 83 aa7.91□□□□□ -1.14
CLIC3-201ENST00000473911 K7EP34 96 aa7.91□□□□□ -1.14
CLIC3-201ENST00000473911 FAM236CP0DP71 79 aa7.91□□□□□ -1.14
CLIC3-201ENST00000473911 NAA38Q9BRA0 125 aaKnown RBP7.91□□□□□ -1.14
CLIC3-201ENST00000473911 A0A1B0GVX0 72 aa7.9□□□□□ -1.14
CLIC3-201ENST00000473911 C8orf87E5RJ46 101 aa7.9□□□□□ -1.14
CLIC3-201ENST00000473911 C21orf62-AS1Q17RA5 79 aa7.89□□□□□ -1.15
CLIC3-201ENST00000473911 ATXN8Q156A1 80 aa7.88□□□□□ -1.15
CLIC3-201ENST00000473911 J3KT08 172 aa7.87□□□□□ -1.15
CLIC3-201ENST00000473911 RBM12B-AS1Q9P1G2 102 aa7.87□□□□□ -1.15
CLIC3-201ENST00000473911 KRTAP9-8Q9BYQ0 159 aa7.86□□□□□ -1.15
CLIC3-201ENST00000473911 SPCS1Q9Y6A9 102 aa7.86□□□□□ -1.15
CLIC3-201ENST00000473911 Q6ZQT0 140 aa7.84□□□□□ -1.15
CLIC3-201ENST00000473911 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.16
CLIC3-201ENST00000473911 F8W1H4 67 aa7.83□□□□□ -1.16
CLIC3-201ENST00000473911 JMJD7-PLA2G4BH0Y9G9 81 aa7.83□□□□□ -1.16
CLIC3-201ENST00000473911 NDUFB1O75438 58 aa7.82□□□□□ -1.16
CLIC3-201ENST00000473911 HRES1P13985 223 aa7.82□□□□□ -1.16
CLIC3-201ENST00000473911 LOC110117498A0A087WWA1 95 aa7.79□□□□□ -1.16
CLIC3-201ENST00000473911 MPLKIPQ8TAP9 179 aa7.79□□□□□ -1.16
CLIC3-201ENST00000473911 ZCCHC13Q8WW36 166 aaKnown RBP7.79□□□□□ -1.16
CLIC3-201ENST00000473911 PDE6GP18545 87 aa7.78□□□□□ -1.16
CLIC3-201ENST00000473911 A0A1B0GW54 56 aa7.77□□□□□ -1.17
CLIC3-201ENST00000473911 A8MWP4 228 aa7.76□□□□□ -1.17
CLIC3-201ENST00000473911 K7ERU9 68 aa7.76□□□□□ -1.17
CLIC3-201ENST00000473911 MTURNQ8N3F0 131 aa7.76□□□□□ -1.17
CLIC3-201ENST00000473911 C14orf132Q9NPU4 83 aa7.76□□□□□ -1.17
CLIC3-201ENST00000473911 C8orf17Q9NRJ1 99 aa7.74□□□□□ -1.17
CLIC3-201ENST00000473911 SPINK7P58062 85 aa7.73□□□□□ -1.17
CLIC3-201ENST00000473911 Q8N9P0 234 aaPredicted RBP7.73□□□□□ -1.17
CLIC3-201ENST00000473911 PRO0461Q9UI25 63 aa7.73□□□□□ -1.17
CLIC3-201ENST00000473911 IGKV3D-7A0A0C4DH55 119 aa7.72□□□□□ -1.17
CLIC3-201ENST00000473911 NREPQ16612 68 aa7.71□□□□□ -1.18
CLIC3-201ENST00000473911 J3QR89 54 aa7.7□□□□□ -1.18
CLIC3-201ENST00000473911 LCE2BO14633 110 aa7.7□□□□□ -1.18
CLIC3-201ENST00000473911 MT2AP02795 61 aa7.7□□□□□ -1.18
CLIC3-201ENST00000473911 SYNE2Q8WXH0 6885 aaKnown RBP7.69□□□□□ -1.18
CLIC3-201ENST00000473911 Q6ZVQ6 151 aa7.69□□□□□ -1.18
CLIC3-201ENST00000473911 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
CLIC3-201ENST00000473911 PRR15Q8IV56 129 aa7.67□□□□□ -1.18
CLIC3-201ENST00000473911 H3BT86 120 aa7.66□□□□□ -1.18
CLIC3-201ENST00000473911 MT1FP04733 61 aa7.66□□□□□ -1.18
CLIC3-201ENST00000473911 KRTAP10-10P60014 251 aa7.64□□□□□ -1.19
CLIC3-201ENST00000473911 WFDC13Q8IUB5 93 aa7.64□□□□□ -1.19
CLIC3-201ENST00000473911 SMCPP49901 116 aaPredicted RBP7.63□□□□□ -1.19
CLIC3-201ENST00000473911 MACF1Q9UPN3 7388 aaKnown RBP7.63□□□□□ -1.19
CLIC3-201ENST00000473911 KRTAP9-3Q9BYQ3 159 aa7.62□□□□□ -1.19
CLIC3-201ENST00000473911 MMP24-AS1A0A0U1RRL7 71 aa7.61□□□□□ -1.19
CLIC3-201ENST00000473911 ETDBQ3ZM63 59 aa7.61□□□□□ -1.19
CLIC3-201ENST00000473911 TMEM254Q8TBM7 123 aa7.61□□□□□ -1.19
CLIC3-201ENST00000473911 MRPL34Q9BQ48 92 aaKnown RBP7.61□□□□□ -1.19
CLIC3-201ENST00000473911 K7EQZ3 153 aa7.59□□□□□ -1.19
CLIC3-201ENST00000473911 NDUFS5O43920 106 aa7.59□□□□□ -1.19
CLIC3-201ENST00000473911 hDV103S1A0JD37 113 aa7.58□□□□□ -1.2
CLIC3-201ENST00000473911 BPY2O14599 106 aa7.56□□□□□ -1.2
CLIC3-201ENST00000473911 FAM240AA0A1B0GVK7 77 aa7.52□□□□□ -1.21
CLIC3-201ENST00000473911 IGKV2D-30A0A075B6S6 120 aa7.49□□□□□ -1.21
CLIC3-201ENST00000473911 IGKV2-30P06310 120 aa7.49□□□□□ -1.21
CLIC3-201ENST00000473911 ACYP1P07311 99 aa7.49□□□□□ -1.21
CLIC3-201ENST00000473911 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
CLIC3-201ENST00000473911 Q8N9L7 120 aa7.47□□□□□ -1.21
CLIC3-201ENST00000473911 SCGB1A1P11684 91 aa7.46□□□□□ -1.22
CLIC3-201ENST00000473911 CASC2Q6XLA1 102 aa7.46□□□□□ -1.22
CLIC3-201ENST00000473911 C7orf65Q6ZTY9 151 aa7.45□□□□□ -1.22
CLIC3-201ENST00000473911 HCG22E2RYF7 251 aa7.43□□□□□ -1.22
CLIC3-201ENST00000473911 Q5W150 140 aa7.43□□□□□ -1.22
CLIC3-201ENST00000473911 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
CLIC3-201ENST00000473911 UBL5Q9BZL1 73 aa7.4□□□□□ -1.22
CLIC3-201ENST00000473911 LINC00846Q9NV44 126 aa7.39□□□□□ -1.23
CLIC3-201ENST00000473911 CXCL6P80162 114 aa7.38□□□□□ -1.23
CLIC3-201ENST00000473911 C4orf26Q17RF5 130 aa7.34□□□□□ -1.23
CLIC3-201ENST00000473911 IMUPQ9GZP8 106 aa7.34□□□□□ -1.23
CLIC3-201ENST00000473911 KRTAP6-3Q3LI67 103 aa7.33□□□□□ -1.24
CLIC3-201ENST00000473911 LINC00643Q86TS7 51 aa7.32□□□□□ -1.24
CLIC3-201ENST00000473911 PCP4P48539 62 aa7.31□□□□□ -1.24
CLIC3-201ENST00000473911 NEBP20929 6669 aa7.28□□□□□ -1.24
CLIC3-201ENST00000473911 MT-ATP8P03928 68 aa7.27□□□□□ -1.25
CLIC3-201ENST00000473911 C5orf47Q569G3 176 aa7.24□□□□□ -1.25
CLIC3-201ENST00000473911 ATP5EP2Q5VTU8 51 aa7.24□□□□□ -1.25
CLIC3-201ENST00000473911 TP53AIP1Q9HCN2 124 aa7.22□□□□□ -1.25
CLIC3-201ENST00000473911 C1orf64Q8NEQ6 169 aa7.21□□□□□ -1.26
CLIC3-201ENST00000473911 S4R3F8 94 aa7.21□□□□□ -1.26
CLIC3-201ENST00000473911 FAM236AA0A1B0GUQ0 79 aa7.19□□□□□ -1.26
CLIC3-201ENST00000473911 FAM236BA0A1B0GV22 79 aa7.19□□□□□ -1.26
CLIC3-201ENST00000473911 KRTAP3-1Q9BYR8 98 aa7.19□□□□□ -1.26
CLIC3-201ENST00000473911 CSAG1Q6PB30 78 aa7.16□□□□□ -1.26
CLIC3-201ENST00000473911 LCA10Q71F78 164 aa7.13□□□□□ -1.27
CLIC3-201ENST00000473911 MUC12Q9UKN1 5478 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms