RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ATP5EP2Q5VTU8 51 aa6.33□□□□□ -1.4
SP140-208ENST00000473711 HRCT1Q6UXD1 115 aa6.33□□□□□ -1.4
SP140-208ENST00000473711 SSBP3-AS1Q7Z2R9 100 aa6.33□□□□□ -1.4
SP140-208ENST00000473711 HSPG2P98160 4391 aa6.33□□□□□ -1.4
SP140-208ENST00000473711 FAT1Q14517 4588 aa6.33□□□□□ -1.4
SP140-208ENST00000473711 SMIM20Q8N5G0 67 aa6.32□□□□□ -1.4
SP140-208ENST00000473711 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
SP140-208ENST00000473711 PRR26Q8N8Z3 221 aa6.31□□□□□ -1.4
SP140-208ENST00000473711 TYMSOSQ8TAI1 123 aa6.3□□□□□ -1.4
SP140-208ENST00000473711 IGKV3D-7A0A0C4DH55 119 aa6.29□□□□□ -1.4
SP140-208ENST00000473711 PKHD1L1Q86WI1 4243 aa6.29□□□□□ -1.4
SP140-208ENST00000473711 A0A087WSZ3 146 aa6.28□□□□□ -1.4
SP140-208ENST00000473711 A0A1B0GW54 56 aa6.28□□□□□ -1.4
SP140-208ENST00000473711 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
SP140-208ENST00000473711 UBL5Q9BZL1 73 aa6.28□□□□□ -1.4
SP140-208ENST00000473711 NREPQ16612 68 aa6.27□□□□□ -1.41
SP140-208ENST00000473711 Q6ZVQ6 151 aa6.27□□□□□ -1.41
SP140-208ENST00000473711 J3KT08 172 aa6.26□□□□□ -1.41
SP140-208ENST00000473711 CD164Q04900 197 aa6.25□□□□□ -1.41
SP140-208ENST00000473711 TMEM258P61165 79 aa6.24□□□□□ -1.41
SP140-208ENST00000473711 RPS28P62857 69 aaKnown RBP6.24□□□□□ -1.41
SP140-208ENST00000473711 DEFB116Q30KQ4 102 aa6.21□□□□□ -1.42
SP140-208ENST00000473711 LINC00304Q8N9R0 145 aa6.21□□□□□ -1.42
SP140-208ENST00000473711 A0A087WVE0 104 aa6.2□□□□□ -1.42
SP140-208ENST00000473711 BPY2O14599 106 aa6.19□□□□□ -1.42
SP140-208ENST00000473711 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
SP140-208ENST00000473711 SPINK1P00995 79 aa6.18□□□□□ -1.42
SP140-208ENST00000473711 SPAG11AQ6PDA7 123 aa6.18□□□□□ -1.42
SP140-208ENST00000473711 LINC00472Q9H8W2 130 aa6.18□□□□□ -1.42
SP140-208ENST00000473711 DMBT1Q9UGM3 2413 aaPredicted RBP6.16□□□□□ -1.42
SP140-208ENST00000473711 CXCL6P80162 114 aa6.16□□□□□ -1.42
SP140-208ENST00000473711 Q96NJ1 140 aa6.16□□□□□ -1.42
SP140-208ENST00000473711 TRAV7A0A075B6U4 112 aa6.15□□□□□ -1.42
SP140-208ENST00000473711 IGKV4-1P06312 121 aa6.15□□□□□ -1.42
SP140-208ENST00000473711 Q5XG85 94 aa6.15□□□□□ -1.42
SP140-208ENST00000473711 LIMD2Q9BT23 127 aa6.15□□□□□ -1.42
SP140-208ENST00000473711 DSCR10P59022 87 aa6.14□□□□□ -1.43
SP140-208ENST00000473711 ASB16-AS1Q495Z4 193 aa6.14□□□□□ -1.43
SP140-208ENST00000473711 Q8N9L7 120 aa6.14□□□□□ -1.43
SP140-208ENST00000473711 OXTP01178 125 aa6.12□□□□□ -1.43
SP140-208ENST00000473711 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
SP140-208ENST00000473711 RPS29P62273 56 aaKnown RBP6.12□□□□□ -1.43
SP140-208ENST00000473711 C1orf195Q5TG92 126 aa6.12□□□□□ -1.43
SP140-208ENST00000473711 C5orf47Q569G3 176 aa6.11□□□□□ -1.43
SP140-208ENST00000473711 CYSTM1Q9H1C7 97 aa6.11□□□□□ -1.43
SP140-208ENST00000473711 K7EQZ3 153 aa6.1□□□□□ -1.43
SP140-208ENST00000473711 FAT3Q8TDW7 4589 aa6.1□□□□□ -1.43
SP140-208ENST00000473711 FAM236DA0A1B0GTK5 79 aa6.09□□□□□ -1.43
SP140-208ENST00000473711 A8MWP4 228 aa6.09□□□□□ -1.43
SP140-208ENST00000473711 FAM236CP0DP71 79 aa6.09□□□□□ -1.43
SP140-208ENST00000473711 C20orf197Q8N268 126 aa6.09□□□□□ -1.43
SP140-208ENST00000473711 NDUFC1O43677 76 aa6.08□□□□□ -1.44
SP140-208ENST00000473711 NDUFB1O75438 58 aa6.08□□□□□ -1.44
SP140-208ENST00000473711 LRP1Q07954 4544 aaKnown RBP6.08□□□□□ -1.44
SP140-208ENST00000473711 FLG2Q5D862 2391 aaPredicted RBP6.08□□□□□ -1.44
SP140-208ENST00000473711 KRTAP29-1A8MX34 341 aaPredicted RBP6.07□□□□□ -1.44
SP140-208ENST00000473711 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
SP140-208ENST00000473711 TNXBP22105 4242 aa6.07□□□□□ -1.44
SP140-208ENST00000473711 KLKP1Q107X0 134 aa6.06□□□□□ -1.44
SP140-208ENST00000473711 RETNLBQ9BQ08 111 aa6.06□□□□□ -1.44
SP140-208ENST00000473711 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
SP140-208ENST00000473711 MYCBP2O75592 4640 aa6.05□□□□□ -1.44
SP140-208ENST00000473711 IGHV6-1A0A0B4J1U7 121 aa6.05□□□□□ -1.44
SP140-208ENST00000473711 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
SP140-208ENST00000473711 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
SP140-208ENST00000473711 HMCN2Q8NDA2 5059 aa6.03□□□□□ -1.44
SP140-208ENST00000473711 H7BZZ5 65 aa6.02□□□□□ -1.45
SP140-208ENST00000473711 NOTCH2NLQ7Z3S9 236 aa6.02□□□□□ -1.45
SP140-208ENST00000473711 WFDC13Q8IUB5 93 aa6.02□□□□□ -1.45
SP140-208ENST00000473711 C8orf17Q9NRJ1 99 aa6.02□□□□□ -1.45
SP140-208ENST00000473711 HCG22E2RYF7 251 aa6.01□□□□□ -1.45
SP140-208ENST00000473711 MMP24-AS1A0A0U1RRL7 71 aa6□□□□□ -1.45
SP140-208ENST00000473711 LINC00313P59037 77 aa5.99□□□□□ -1.45
SP140-208ENST00000473711 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
SP140-208ENST00000473711 CASC2Q6XLA1 102 aa5.99□□□□□ -1.45
SP140-208ENST00000473711 C8orf87E5RJ46 101 aa5.98□□□□□ -1.45
SP140-208ENST00000473711 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
SP140-208ENST00000473711 SMIM26A0A096LP01 95 aa5.97□□□□□ -1.45
SP140-208ENST00000473711 hDV103S1A0JD37 113 aa5.97□□□□□ -1.45
SP140-208ENST00000473711 TMEM254Q8TBM7 123 aa5.96□□□□□ -1.46
SP140-208ENST00000473711 RNF213Q63HN8 5207 aa5.96□□□□□ -1.46
SP140-208ENST00000473711 C4orf26Q17RF5 130 aa5.95□□□□□ -1.46
SP140-208ENST00000473711 IGLV7-46A0A075B6I9 117 aa5.94□□□□□ -1.46
SP140-208ENST00000473711 C9orf92A6NGG3 77 aa5.94□□□□□ -1.46
SP140-208ENST00000473711 FP248Q71RG6 208 aaPredicted RBP5.94□□□□□ -1.46
SP140-208ENST00000473711 MRPL34Q9BQ48 92 aaKnown RBP5.94□□□□□ -1.46
SP140-208ENST00000473711 PRR4Q16378 134 aa5.93□□□□□ -1.46
SP140-208ENST00000473711 OCR1Q9BZK8 76 aa5.93□□□□□ -1.46
SP140-208ENST00000473711 A0A0U1RQV1 116 aa5.92□□□□□ -1.46
SP140-208ENST00000473711 KRTAP16-1A8MUX0 517 aa5.91□□□□□ -1.46
SP140-208ENST00000473711 NDUFS5O43920 106 aa5.91□□□□□ -1.46
SP140-208ENST00000473711 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
SP140-208ENST00000473711 KRTAP13-3Q3SY46 172 aa5.86□□□□□ -1.47
SP140-208ENST00000473711 Q8N9P0 234 aaPredicted RBP5.86□□□□□ -1.47
SP140-208ENST00000473711 TP53AIP1Q9HCN2 124 aa5.85□□□□□ -1.47
SP140-208ENST00000473711 PRO0628Q9UI54 55 aa5.84□□□□□ -1.47
SP140-208ENST00000473711 A8MUU9 505 aa5.82□□□□□ -1.48
SP140-208ENST00000473711 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
SP140-208ENST00000473711 Q5W150 140 aa5.81□□□□□ -1.48
SP140-208ENST00000473711 H0Y9P7 68 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms