RNA–Protein interactions for RNA: ENST00000472419.1

VEPH1-207, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 3

Gene VEPH1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-207ENST00000472419 PTPN13Q12923 2485 aa0.49□□□□□ -2.33
VEPH1-207ENST00000472419 SETXQ7Z333 2677 aaKnown RBP0.49□□□□□ -2.33
VEPH1-207ENST00000472419 DNAH11Q96DT5 4516 aa0.48□□□□□ -2.33
VEPH1-207ENST00000472419 HIVEP3Q5T1R4 2406 aa0.47□□□□□ -2.33
VEPH1-207ENST00000472419 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
VEPH1-207ENST00000472419 MYCBP2O75592 4640 aa0.47□□□□□ -2.33
VEPH1-207ENST00000472419 SRRM2Q9UQ35 2752 aaKnown RBP0.47□□□□□ -2.33
VEPH1-207ENST00000472419 ACANP16112 2415 aa0.47□□□□□ -2.33
VEPH1-207ENST00000472419 NSD1Q96L73 2696 aaPredicted RBP0.47□□□□□ -2.33
VEPH1-207ENST00000472419 GCN1Q92616 2671 aaKnown RBP0.46□□□□□ -2.34
VEPH1-207ENST00000472419 SETD2Q9BYW2 2564 aaPredicted RBP0.46□□□□□ -2.34
VEPH1-207ENST00000472419 PKD1P98161 4303 aa0.46□□□□□ -2.34
VEPH1-207ENST00000472419 SACSQ9NZJ4 4579 aa0.46□□□□□ -2.34
VEPH1-207ENST00000472419 CACNA1AO00555 2505 aa0.45□□□□□ -2.34
VEPH1-207ENST00000472419 WNK1Q9H4A3 2382 aa0.45□□□□□ -2.34
VEPH1-207ENST00000472419 H0YGG7 62 aa0.45□□□□□ -2.34
VEPH1-207ENST00000472419 ZZEF1O43149 2961 aa0.45□□□□□ -2.34
VEPH1-207ENST00000472419 DEFB131AP59861 70 aa0.45□□□□□ -2.34
VEPH1-207ENST00000472419 NF1P21359 2839 aa0.45□□□□□ -2.34
VEPH1-207ENST00000472419 LPAP08519 4548 aa0.44□□□□□ -2.34
VEPH1-207ENST00000472419 STAB1Q9NY15 2570 aa0.44□□□□□ -2.34
VEPH1-207ENST00000472419 FLNCQ14315 2725 aa0.44□□□□□ -2.34
VEPH1-207ENST00000472419 MUC5BQ9HC84 5762 aaPredicted RBP0.44□□□□□ -2.34
VEPH1-207ENST00000472419 HRNRQ86YZ3 2850 aaPredicted RBP0.44□□□□□ -2.34
VEPH1-207ENST00000472419 DNAH3Q8TD57 4116 aa0.44□□□□□ -2.34
VEPH1-207ENST00000472419 NOP10Q9NPE3 64 aaKnown RBP0.43□□□□□ -2.34
VEPH1-207ENST00000472419 NCOR2Q9Y618 2525 aa0.43□□□□□ -2.34
VEPH1-207ENST00000472419 CUBNO60494 3623 aa0.43□□□□□ -2.34
VEPH1-207ENST00000472419 HECTD4Q9Y4D8 3996 aa0.42□□□□□ -2.34
VEPH1-207ENST00000472419 PKHD1L1Q86WI1 4243 aa0.42□□□□□ -2.34
VEPH1-207ENST00000472419 APC2O95996 2303 aa0.42□□□□□ -2.34
VEPH1-207ENST00000472419 SPRR2DP22532 72 aa0.42□□□□□ -2.34
VEPH1-207ENST00000472419 FLNBO75369 2602 aaKnown RBP0.41□□□□□ -2.34
VEPH1-207ENST00000472419 HSPG2P98160 4391 aa0.41□□□□□ -2.34
VEPH1-207ENST00000472419 M0QY20 66 aa0.41□□□□□ -2.34
VEPH1-207ENST00000472419 SPENQ96T58 3664 aaKnown RBP0.41□□□□□ -2.34
VEPH1-207ENST00000472419 TACC2O95359 2948 aa0.41□□□□□ -2.34
VEPH1-207ENST00000472419 RPL39P62891 51 aaKnown RBP0.4□□□□□ -2.35
VEPH1-207ENST00000472419 CLPSL2Q6UWE3 100 aa0.4□□□□□ -2.35
VEPH1-207ENST00000472419 SPTBN4Q9H254 2564 aa0.4□□□□□ -2.35
VEPH1-207ENST00000472419 DMXL1Q9Y485 3027 aa0.39□□□□□ -2.35
VEPH1-207ENST00000472419 ANK3Q12955 4377 aaKnown RBP0.39□□□□□ -2.35
VEPH1-207ENST00000472419 COL7A1Q02388 2944 aa0.38□□□□□ -2.35
VEPH1-207ENST00000472419 POLR2KP53803 58 aaKnown RBP0.38□□□□□ -2.35
VEPH1-207ENST00000472419 DMBT1Q9UGM3 2413 aaPredicted RBP0.38□□□□□ -2.35
VEPH1-207ENST00000472419 DNAH2Q9P225 4427 aa0.38□□□□□ -2.35
VEPH1-207ENST00000472419 RANBP2P49792 3224 aaKnown RBP0.38□□□□□ -2.35
VEPH1-207ENST00000472419 COL6A5A8TX70 2615 aa0.37□□□□□ -2.35
VEPH1-207ENST00000472419 IGSF10Q6WRI0 2623 aa0.37□□□□□ -2.35
VEPH1-207ENST00000472419 VPS13DQ5THJ4 4388 aa0.37□□□□□ -2.35
VEPH1-207ENST00000472419 ACACAQ13085 2346 aa0.37□□□□□ -2.35
VEPH1-207ENST00000472419 PKHD1P08F94 4074 aa0.37□□□□□ -2.35
VEPH1-207ENST00000472419 ANKHD1Q8IWZ3 2542 aaKnown RBP0.37□□□□□ -2.35
VEPH1-207ENST00000472419 DNAH9Q9NYC9 4486 aa0.37□□□□□ -2.35
VEPH1-207ENST00000472419 NBEAL2Q6ZNJ1 2754 aa0.36□□□□□ -2.35
VEPH1-207ENST00000472419 RIF1Q5UIP0 2472 aaKnown RBP0.36□□□□□ -2.35
VEPH1-207ENST00000472419 C9orf92A6NGG3 77 aa0.36□□□□□ -2.35
VEPH1-207ENST00000472419 H3BNG1 76 aa0.36□□□□□ -2.35
VEPH1-207ENST00000472419 SPRR2BP35325 72 aa0.36□□□□□ -2.35
VEPH1-207ENST00000472419 RPL39LQ96EH5 51 aaKnown RBP0.36□□□□□ -2.35
VEPH1-207ENST00000472419 CHD7Q9P2D1 2997 aa0.36□□□□□ -2.35
VEPH1-207ENST00000472419 FLGP20930 4061 aaPredicted RBP0.36□□□□□ -2.35
VEPH1-207ENST00000472419 APOBP04114 4563 aaKnown RBP0.36□□□□□ -2.35
VEPH1-207ENST00000472419 MDN1Q9NU22 5596 aa0.36□□□□□ -2.35
VEPH1-207ENST00000472419 LRRK2Q5S007 2527 aa0.36□□□□□ -2.35
VEPH1-207ENST00000472419 DCHS2Q6V1P9 2916 aa0.36□□□□□ -2.35
VEPH1-207ENST00000472419 EPG5Q9HCE0 2579 aa0.35□□□□□ -2.35
VEPH1-207ENST00000472419 A8MTW9 85 aa0.35□□□□□ -2.35
VEPH1-207ENST00000472419 DNAH7Q8WXX0 4024 aa0.35□□□□□ -2.35
VEPH1-207ENST00000472419 MTORP42345 2549 aa0.35□□□□□ -2.35
VEPH1-207ENST00000472419 DNAH6Q9C0G6 4158 aa0.35□□□□□ -2.35
VEPH1-207ENST00000472419 SONP18583 2426 aaKnown RBP0.35□□□□□ -2.35
VEPH1-207ENST00000472419 DYNC2H1Q8NCM8 4307 aaKnown RBP0.34□□□□□ -2.35
VEPH1-207ENST00000472419 NBPF19A0A087WUL8 3843 aa0.34□□□□□ -2.35
VEPH1-207ENST00000472419 HIVEP1P15822 2718 aa0.34□□□□□ -2.35
VEPH1-207ENST00000472419 COL6A3P12111 3177 aa0.34□□□□□ -2.35
VEPH1-207ENST00000472419 KRTAP6-2Q3LI66 62 aa0.34□□□□□ -2.36
VEPH1-207ENST00000472419 ANKRD11Q6UB99 2663 aaPredicted RBP0.34□□□□□ -2.36
VEPH1-207ENST00000472419 SPG11Q96JI7 2443 aa0.34□□□□□ -2.36
VEPH1-207ENST00000472419 CCDC168Q8NDH2 2452 aa0.33□□□□□ -2.36
VEPH1-207ENST00000472419 LRP1BQ9NZR2 4599 aa0.33□□□□□ -2.36
VEPH1-207ENST00000472419 CRYBG3Q68DQ2 2970 aa0.33□□□□□ -2.36
VEPH1-207ENST00000472419 M0QZ58 72 aa0.33□□□□□ -2.36
VEPH1-207ENST00000472419 USP9YO00507 2555 aaPredicted RBP0.33□□□□□ -2.36
VEPH1-207ENST00000472419 TENM2Q9NT68 2774 aa0.33□□□□□ -2.36
VEPH1-207ENST00000472419 LAMA5O15230 3695 aa0.33□□□□□ -2.36
VEPH1-207ENST00000472419 COL12A1Q99715 3063 aa0.32□□□□□ -2.36
VEPH1-207ENST00000472419 FAT3Q8TDW7 4589 aa0.32□□□□□ -2.36
VEPH1-207ENST00000472419 DNAH8Q96JB1 4490 aa0.32□□□□□ -2.36
VEPH1-207ENST00000472419 AKAP9Q99996 3911 aa0.32□□□□□ -2.36
VEPH1-207ENST00000472419 KALRNO60229 2985 aa0.32□□□□□ -2.36
VEPH1-207ENST00000472419 FAM186AA6NE01 2351 aa0.32□□□□□ -2.36
VEPH1-207ENST00000472419 ACACBO00763 2458 aa0.31□□□□□ -2.36
VEPH1-207ENST00000472419 SVEP1Q4LDE5 3571 aa0.31□□□□□ -2.36
VEPH1-207ENST00000472419 TEP1Q99973 2627 aaKnown RBP0.31□□□□□ -2.36
VEPH1-207ENST00000472419 TNP1P09430 55 aa0.31□□□□□ -2.36
VEPH1-207ENST00000472419 MAP1AP78559 2803 aaPredicted RBP0.31□□□□□ -2.36
VEPH1-207ENST00000472419 ZANQ9Y493 2812 aa0.31□□□□□ -2.36
VEPH1-207ENST00000472419 HMCN2Q8NDA2 5059 aa0.3□□□□□ -2.36
VEPH1-207ENST00000472419 UTP20O75691 2785 aaKnown RBP0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms