RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 C9orf118A6NHY6 69 aa7.68□□□□□ -1.18
SSR4-208ENST00000471880 J3KT08 172 aa7.68□□□□□ -1.18
SSR4-208ENST00000471880 LOC110117498A0A087WWA1 95 aa7.67□□□□□ -1.18
SSR4-208ENST00000471880 KRTAP16-1A8MUX0 517 aa7.67□□□□□ -1.18
SSR4-208ENST00000471880 NDUFB1O75438 58 aa7.67□□□□□ -1.18
SSR4-208ENST00000471880 MTURNQ8N3F0 131 aa7.67□□□□□ -1.18
SSR4-208ENST00000471880 C8orf87E5RJ46 101 aa7.66□□□□□ -1.18
SSR4-208ENST00000471880 PDE6GP18545 87 aa7.66□□□□□ -1.18
SSR4-208ENST00000471880 A0A1W2PPM0 123 aa7.65□□□□□ -1.18
SSR4-208ENST00000471880 TAX1BP3O14907 124 aa7.65□□□□□ -1.18
SSR4-208ENST00000471880 FLGP20930 4061 aaPredicted RBP7.62□□□□□ -1.19
SSR4-208ENST00000471880 FAM236DA0A1B0GTK5 79 aa7.61□□□□□ -1.19
SSR4-208ENST00000471880 H3BT86 120 aa7.61□□□□□ -1.19
SSR4-208ENST00000471880 FAM236CP0DP71 79 aa7.61□□□□□ -1.19
SSR4-208ENST00000471880 NREPQ16612 68 aa7.61□□□□□ -1.19
SSR4-208ENST00000471880 LCE2DQ5TA82 110 aaPredicted RBP7.61□□□□□ -1.19
SSR4-208ENST00000471880 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
SSR4-208ENST00000471880 A0A1B0GW54 56 aa7.6□□□□□ -1.19
SSR4-208ENST00000471880 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
SSR4-208ENST00000471880 SPCS1Q9Y6A9 102 aa7.59□□□□□ -1.19
SSR4-208ENST00000471880 A8MWP4 228 aa7.58□□□□□ -1.2
SSR4-208ENST00000471880 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
SSR4-208ENST00000471880 C8orf17Q9NRJ1 99 aa7.56□□□□□ -1.2
SSR4-208ENST00000471880 IGKV3D-7A0A0C4DH55 119 aa7.55□□□□□ -1.2
SSR4-208ENST00000471880 RBM12B-AS1Q9P1G2 102 aa7.54□□□□□ -1.2
SSR4-208ENST00000471880 COL5A1-AS1Q5SY13 56 aa7.53□□□□□ -1.2
SSR4-208ENST00000471880 ZCCHC13Q8WW36 166 aaKnown RBP7.53□□□□□ -1.2
SSR4-208ENST00000471880 Q6ZVQ6 151 aa7.51□□□□□ -1.21
SSR4-208ENST00000471880 PRR15Q8IV56 129 aa7.5□□□□□ -1.21
SSR4-208ENST00000471880 PCP4L1A6NKN8 68 aa7.48□□□□□ -1.21
SSR4-208ENST00000471880 NDUFS5O43920 106 aa7.48□□□□□ -1.21
SSR4-208ENST00000471880 Q8N9P0 234 aaPredicted RBP7.48□□□□□ -1.21
SSR4-208ENST00000471880 FSIP2Q5CZC0 6907 aa7.48□□□□□ -1.21
SSR4-208ENST00000471880 BPY2O14599 106 aa7.47□□□□□ -1.21
SSR4-208ENST00000471880 HRES1P13985 223 aa7.47□□□□□ -1.21
SSR4-208ENST00000471880 K7EQZ3 153 aa7.46□□□□□ -1.22
SSR4-208ENST00000471880 SPINK7P58062 85 aa7.46□□□□□ -1.22
SSR4-208ENST00000471880 MRPL34Q9BQ48 92 aaKnown RBP7.45□□□□□ -1.22
SSR4-208ENST00000471880 MMP24-AS1A0A0U1RRL7 71 aa7.44□□□□□ -1.22
SSR4-208ENST00000471880 K7EP34 96 aa7.44□□□□□ -1.22
SSR4-208ENST00000471880 SMCPP49901 116 aaPredicted RBP7.44□□□□□ -1.22
SSR4-208ENST00000471880 TMEM254Q8TBM7 123 aa7.44□□□□□ -1.22
SSR4-208ENST00000471880 hDV103S1A0JD37 113 aa7.43□□□□□ -1.22
SSR4-208ENST00000471880 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
SSR4-208ENST00000471880 Q8N9L7 120 aa7.41□□□□□ -1.22
SSR4-208ENST00000471880 WFDC13Q8IUB5 93 aa7.4□□□□□ -1.22
SSR4-208ENST00000471880 MPLKIPQ8TAP9 179 aa7.4□□□□□ -1.22
SSR4-208ENST00000471880 GTF2H5Q6ZYL4 71 aa7.38□□□□□ -1.23
SSR4-208ENST00000471880 UBL5Q9BZL1 73 aa7.37□□□□□ -1.23
SSR4-208ENST00000471880 PRO0461Q9UI25 63 aa7.37□□□□□ -1.23
SSR4-208ENST00000471880 CASC2Q6XLA1 102 aa7.36□□□□□ -1.23
SSR4-208ENST00000471880 KRTAP9-8Q9BYQ0 159 aa7.35□□□□□ -1.23
SSR4-208ENST00000471880 LINC00846Q9NV44 126 aa7.35□□□□□ -1.23
SSR4-208ENST00000471880 IGKV2D-30A0A075B6S6 120 aa7.32□□□□□ -1.24
SSR4-208ENST00000471880 HCG22E2RYF7 251 aa7.32□□□□□ -1.24
SSR4-208ENST00000471880 IGKV2-30P06310 120 aa7.32□□□□□ -1.24
SSR4-208ENST00000471880 F8W1H4 67 aa7.29□□□□□ -1.24
SSR4-208ENST00000471880 ETDBQ3ZM63 59 aa7.28□□□□□ -1.24
SSR4-208ENST00000471880 Q5W150 140 aa7.26□□□□□ -1.25
SSR4-208ENST00000471880 C7orf65Q6ZTY9 151 aa7.26□□□□□ -1.25
SSR4-208ENST00000471880 MT2AP02795 61 aa7.24□□□□□ -1.25
SSR4-208ENST00000471880 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
SSR4-208ENST00000471880 CXCL6P80162 114 aa7.23□□□□□ -1.25
SSR4-208ENST00000471880 MT1FP04733 61 aa7.19□□□□□ -1.26
SSR4-208ENST00000471880 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
SSR4-208ENST00000471880 C4orf26Q17RF5 130 aa7.15□□□□□ -1.26
SSR4-208ENST00000471880 USH2AO75445 5202 aa7.13□□□□□ -1.27
SSR4-208ENST00000471880 SSPOA2VEC9 5147 aa7.12□□□□□ -1.27
SSR4-208ENST00000471880 LCE2BO14633 110 aa7.11□□□□□ -1.27
SSR4-208ENST00000471880 KRTAP9-3Q9BYQ3 159 aa7.11□□□□□ -1.27
SSR4-208ENST00000471880 TP53AIP1Q9HCN2 124 aa7.1□□□□□ -1.27
SSR4-208ENST00000471880 ACYP1P07311 99 aa7.08□□□□□ -1.28
SSR4-208ENST00000471880 HIST1H4AP62805 103 aaKnown RBP7.07□□□□□ -1.28
SSR4-208ENST00000471880 FAM240AA0A1B0GVK7 77 aa7.02□□□□□ -1.29
SSR4-208ENST00000471880 C1orf64Q8NEQ6 169 aa7.02□□□□□ -1.29
SSR4-208ENST00000471880 C5orf47Q569G3 176 aa7.01□□□□□ -1.29
SSR4-208ENST00000471880 ATP5EP2Q5VTU8 51 aa7.01□□□□□ -1.29
SSR4-208ENST00000471880 A0A1B0GV90 55 aa7□□□□□ -1.29
SSR4-208ENST00000471880 S4R3F8 94 aa6.99□□□□□ -1.29
SSR4-208ENST00000471880 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
SSR4-208ENST00000471880 FAM236AA0A1B0GUQ0 79 aa6.95□□□□□ -1.3
SSR4-208ENST00000471880 FAM236BA0A1B0GV22 79 aa6.95□□□□□ -1.3
SSR4-208ENST00000471880 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
SSR4-208ENST00000471880 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.94□□□□□ -1.3
SSR4-208ENST00000471880 KRTAP3-1Q9BYR8 98 aa6.94□□□□□ -1.3
SSR4-208ENST00000471880 CYP4F30PQ9H0H9 118 aa6.94□□□□□ -1.3
SSR4-208ENST00000471880 A0A087WVE0 104 aa6.93□□□□□ -1.3
SSR4-208ENST00000471880 LOC101927531A0A1B0GV80 90 aa6.92□□□□□ -1.3
SSR4-208ENST00000471880 H0Y9P7 68 aa6.92□□□□□ -1.3
SSR4-208ENST00000471880 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
SSR4-208ENST00000471880 FCGBPQ9Y6R7 5405 aaPredicted RBP6.92□□□□□ -1.3
SSR4-208ENST00000471880 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
SSR4-208ENST00000471880 LCA10Q71F78 164 aa6.91□□□□□ -1.3
SSR4-208ENST00000471880 UQCRQO14949 82 aa6.9□□□□□ -1.3
SSR4-208ENST00000471880 ATOX1O00244 68 aa6.86□□□□□ -1.31
SSR4-208ENST00000471880 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
SSR4-208ENST00000471880 J3QR89 54 aa6.84□□□□□ -1.31
SSR4-208ENST00000471880 LINC00208Q96KT6 92 aa6.81□□□□□ -1.32
SSR4-208ENST00000471880 KRTAP19-6Q3LI70 58 aa6.8□□□□□ -1.32
SSR4-208ENST00000471880 MP68P56378 58 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms