RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SIGMAR1Q99720 223 aa4.03□□□□□ -1.76
USP48-207ENST00000471752 LINC00472Q9H8W2 130 aa4.03□□□□□ -1.76
USP48-207ENST00000471752 IGKV4-1P06312 121 aa4.02□□□□□ -1.77
USP48-207ENST00000471752 LINC00313P59037 77 aa4.02□□□□□ -1.77
USP48-207ENST00000471752 VAMP8Q9BV40 100 aa4.02□□□□□ -1.77
USP48-207ENST00000471752 SS18L2Q9UHA2 77 aa4.02□□□□□ -1.77
USP48-207ENST00000471752 ANKRD29Q8N6D5 301 aa4.01□□□□□ -1.77
USP48-207ENST00000471752 PYY3Q5JQD4 70 aa4□□□□□ -1.77
USP48-207ENST00000471752 IGHV6-1A0A0B4J1U7 121 aa3.99□□□□□ -1.77
USP48-207ENST00000471752 A0A1B0GX51 115 aa3.99□□□□□ -1.77
USP48-207ENST00000471752 TRBV7-4A0A0J9YYF1 115 aa3.98□□□□□ -1.77
USP48-207ENST00000471752 TRBV20-1A0A075B6N2 111 aa3.97□□□□□ -1.77
USP48-207ENST00000471752 SNCGO76070 127 aa3.97□□□□□ -1.77
USP48-207ENST00000471752 CCKP06307 115 aa3.97□□□□□ -1.77
USP48-207ENST00000471752 ORMDL1Q9P0S3 153 aa3.97□□□□□ -1.77
USP48-207ENST00000471752 FAM236DA0A1B0GTK5 79 aa3.96□□□□□ -1.78
USP48-207ENST00000471752 FAM236CP0DP71 79 aa3.96□□□□□ -1.78
USP48-207ENST00000471752 PSMB2P49721 201 aa3.96□□□□□ -1.78
USP48-207ENST00000471752 KRTAP10-10P60014 251 aa3.96□□□□□ -1.78
USP48-207ENST00000471752 HSD52Q0P140 79 aa3.95□□□□□ -1.78
USP48-207ENST00000471752 VPS25Q9BRG1 176 aa3.95□□□□□ -1.78
USP48-207ENST00000471752 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
USP48-207ENST00000471752 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
USP48-207ENST00000471752 TMEM256-PLSCR3K7ERE1 68 aa3.93□□□□□ -1.78
USP48-207ENST00000471752 DNAL4O96015 105 aa3.93□□□□□ -1.78
USP48-207ENST00000471752 TRACP01848 142 aa3.93□□□□□ -1.78
USP48-207ENST00000471752 NAA38Q9BRA0 125 aaKnown RBP3.93□□□□□ -1.78
USP48-207ENST00000471752 UBE2V1Q13404 147 aa3.92□□□□□ -1.78
USP48-207ENST00000471752 BAALC-AS2P0C853 105 aa3.91□□□□□ -1.78
USP48-207ENST00000471752 SPINK7P58062 85 aa3.91□□□□□ -1.78
USP48-207ENST00000471752 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.79
USP48-207ENST00000471752 SCGB1C2P0DMR2 95 aa3.9□□□□□ -1.79
USP48-207ENST00000471752 RBM3P98179 157 aaKnown RBP3.9□□□□□ -1.79
USP48-207ENST00000471752 ZCCHC13Q8WW36 166 aaKnown RBP3.9□□□□□ -1.79
USP48-207ENST00000471752 RBM12B-AS1Q9P1G2 102 aa3.9□□□□□ -1.79
USP48-207ENST00000471752 TMA7Q9Y2S6 64 aaKnown RBP3.9□□□□□ -1.79
USP48-207ENST00000471752 Q6ZQT0 140 aa3.89□□□□□ -1.79
USP48-207ENST00000471752 UQCR10Q9UDW1 63 aa3.89□□□□□ -1.79
USP48-207ENST00000471752 IGKV3D-7A0A0C4DH55 119 aa3.88□□□□□ -1.79
USP48-207ENST00000471752 COX6CP09669 75 aa3.88□□□□□ -1.79
USP48-207ENST00000471752 C8orf87E5RJ46 101 aa3.87□□□□□ -1.79
USP48-207ENST00000471752 Q8N9P0 234 aaPredicted RBP3.87□□□□□ -1.79
USP48-207ENST00000471752 C9JAW5 83 aa3.86□□□□□ -1.79
USP48-207ENST00000471752 H3BQ85 93 aa3.86□□□□□ -1.79
USP48-207ENST00000471752 DSCR8Q96T75 97 aa3.86□□□□□ -1.79
USP48-207ENST00000471752 C8orf17Q9NRJ1 99 aa3.86□□□□□ -1.79
USP48-207ENST00000471752 C21orf62-AS1Q17RA5 79 aa3.84□□□□□ -1.79
USP48-207ENST00000471752 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.79
USP48-207ENST00000471752 WFDC13Q8IUB5 93 aa3.84□□□□□ -1.79
USP48-207ENST00000471752 A8MWP4 228 aa3.83□□□□□ -1.8
USP48-207ENST00000471752 C14orf132Q9NPU4 83 aa3.83□□□□□ -1.8
USP48-207ENST00000471752 LOC110117498A0A087WWA1 95 aa3.81□□□□□ -1.8
USP48-207ENST00000471752 MMP24-AS1A0A0U1RRL7 71 aa3.81□□□□□ -1.8
USP48-207ENST00000471752 J3KT08 172 aa3.81□□□□□ -1.8
USP48-207ENST00000471752 Q5W150 140 aa3.81□□□□□ -1.8
USP48-207ENST00000471752 Q6ZVQ6 151 aa3.81□□□□□ -1.8
USP48-207ENST00000471752 LYRM7Q5U5X0 104 aa3.8□□□□□ -1.8
USP48-207ENST00000471752 PRR15Q8IV56 129 aa3.8□□□□□ -1.8
USP48-207ENST00000471752 NDUFB1O75438 58 aa3.79□□□□□ -1.8
USP48-207ENST00000471752 ATXN8Q156A1 80 aa3.79□□□□□ -1.8
USP48-207ENST00000471752 K7EQZ3 153 aa3.78□□□□□ -1.8
USP48-207ENST00000471752 MTURNQ8N3F0 131 aa3.78□□□□□ -1.8
USP48-207ENST00000471752 NREPQ16612 68 aa3.77□□□□□ -1.81
USP48-207ENST00000471752 JMJD7-PLA2G4BH0Y9G9 81 aa3.76□□□□□ -1.81
USP48-207ENST00000471752 H1FX-AS1Q4G0G2 97 aa3.76□□□□□ -1.81
USP48-207ENST00000471752 Q8N9L7 120 aa3.76□□□□□ -1.81
USP48-207ENST00000471752 MRPL34Q9BQ48 92 aaKnown RBP3.76□□□□□ -1.81
USP48-207ENST00000471752 IGKV2D-30A0A075B6S6 120 aa3.75□□□□□ -1.81
USP48-207ENST00000471752 IGKV2-30P06310 120 aa3.75□□□□□ -1.81
USP48-207ENST00000471752 TMEM254Q8TBM7 123 aa3.75□□□□□ -1.81
USP48-207ENST00000471752 hDV103S1A0JD37 113 aa3.74□□□□□ -1.81
USP48-207ENST00000471752 BATFQ16520 125 aa3.74□□□□□ -1.81
USP48-207ENST00000471752 M0R143 59 aa3.73□□□□□ -1.81
USP48-207ENST00000471752 NDUFS5O43920 106 aa3.73□□□□□ -1.81
USP48-207ENST00000471752 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
USP48-207ENST00000471752 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
USP48-207ENST00000471752 A0A1B0GW54 56 aa3.72□□□□□ -1.81
USP48-207ENST00000471752 BPY2O14599 106 aa3.72□□□□□ -1.81
USP48-207ENST00000471752 TAX1BP3O14907 124 aa3.72□□□□□ -1.81
USP48-207ENST00000471752 PDE6GP18545 87 aa3.72□□□□□ -1.81
USP48-207ENST00000471752 C4orf26Q17RF5 130 aa3.72□□□□□ -1.81
USP48-207ENST00000471752 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
USP48-207ENST00000471752 NEBP20929 6669 aa3.71□□□□□ -1.82
USP48-207ENST00000471752 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
USP48-207ENST00000471752 HCG22E2RYF7 251 aa3.68□□□□□ -1.82
USP48-207ENST00000471752 MT1BP07438 61 aa3.68□□□□□ -1.82
USP48-207ENST00000471752 C5orf47Q569G3 176 aa3.68□□□□□ -1.82
USP48-207ENST00000471752 A0A1W2PPM0 123 aa3.67□□□□□ -1.82
USP48-207ENST00000471752 SMIM6P0DI80 62 aa3.66□□□□□ -1.82
USP48-207ENST00000471752 CASC2Q6XLA1 102 aa3.66□□□□□ -1.82
USP48-207ENST00000471752 H3BT86 120 aa3.65□□□□□ -1.83
USP48-207ENST00000471752 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.83
USP48-207ENST00000471752 LINC00846Q9NV44 126 aa3.65□□□□□ -1.83
USP48-207ENST00000471752 MDN1Q9NU22 5596 aa3.65□□□□□ -1.83
USP48-207ENST00000471752 LOC105371267A0A1B0GV96 52 aa3.64□□□□□ -1.83
USP48-207ENST00000471752 KMT2DO14686 5537 aa3.64□□□□□ -1.83
USP48-207ENST00000471752 A0A087WVE0 104 aa3.63□□□□□ -1.83
USP48-207ENST00000471752 TSTD3H0UI37 97 aa3.63□□□□□ -1.83
USP48-207ENST00000471752 LCA10Q71F78 164 aa3.62□□□□□ -1.83
USP48-207ENST00000471752 PRO0461Q9UI25 63 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms