RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 SPRR1BP22528 89 aa1.47□□□□□ -2.17
SCN3A-207ENST00000471697 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
SCN3A-207ENST00000471697 FBN2P35556 2912 aa1.47□□□□□ -2.17
SCN3A-207ENST00000471697 FRYQ5TBA9 3013 aa1.46□□□□□ -2.18
SCN3A-207ENST00000471697 NOP10Q9NPE3 64 aaKnown RBP1.46□□□□□ -2.18
SCN3A-207ENST00000471697 AKAP6Q13023 2319 aa1.46□□□□□ -2.18
SCN3A-207ENST00000471697 CSPG4Q6UVK1 2322 aa1.46□□□□□ -2.18
SCN3A-207ENST00000471697 ABCA2Q9BZC7 2435 aa1.46□□□□□ -2.18
SCN3A-207ENST00000471697 WNK1Q9H4A3 2382 aa1.45□□□□□ -2.18
SCN3A-207ENST00000471697 DMXL1Q9Y485 3027 aa1.45□□□□□ -2.18
SCN3A-207ENST00000471697 ZZEF1O43149 2961 aa1.45□□□□□ -2.18
SCN3A-207ENST00000471697 BIRC6Q9NR09 4857 aa1.45□□□□□ -2.18
SCN3A-207ENST00000471697 TEX15Q9BXT5 2789 aa1.45□□□□□ -2.18
SCN3A-207ENST00000471697 CFAP46Q8IYW2 2715 aa1.45□□□□□ -2.18
SCN3A-207ENST00000471697 MGAQ8IWI9 3026 aa1.45□□□□□ -2.18
SCN3A-207ENST00000471697 SPTBN2O15020 2390 aa1.44□□□□□ -2.18
SCN3A-207ENST00000471697 RYR3Q15413 4870 aa1.44□□□□□ -2.18
SCN3A-207ENST00000471697 LOC400499M0QZD8 3231 aa1.44□□□□□ -2.18
SCN3A-207ENST00000471697 HYDINQ4G0P3 5121 aa1.44□□□□□ -2.18
SCN3A-207ENST00000471697 RIF1Q5UIP0 2472 aaKnown RBP1.44□□□□□ -2.18
SCN3A-207ENST00000471697 APELAP0DMC3 54 aa1.44□□□□□ -2.18
SCN3A-207ENST00000471697 RHPN1-AS1Q9BWJ2 59 aa1.44□□□□□ -2.18
SCN3A-207ENST00000471697 LCE3DQ9BYE3 92 aa1.44□□□□□ -2.18
SCN3A-207ENST00000471697 C10orf95Q9H7T3 257 aa1.44□□□□□ -2.18
SCN3A-207ENST00000471697 FAM186AA6NE01 2351 aa1.44□□□□□ -2.18
SCN3A-207ENST00000471697 POLQO75417 2590 aa1.44□□□□□ -2.18
SCN3A-207ENST00000471697 SPG11Q96JI7 2443 aa1.43□□□□□ -2.18
SCN3A-207ENST00000471697 PRLHP81277 87 aa1.43□□□□□ -2.18
SCN3A-207ENST00000471697 Q5VSD8 79 aa1.43□□□□□ -2.18
SCN3A-207ENST00000471697 TENM4Q6N022 2769 aa1.43□□□□□ -2.18
SCN3A-207ENST00000471697 RYR1P21817 5038 aa1.43□□□□□ -2.18
SCN3A-207ENST00000471697 SETD2Q9BYW2 2564 aaPredicted RBP1.43□□□□□ -2.18
SCN3A-207ENST00000471697 CHD7Q9P2D1 2997 aa1.42□□□□□ -2.18
SCN3A-207ENST00000471697 APLNQ9ULZ1 77 aa1.42□□□□□ -2.18
SCN3A-207ENST00000471697 EPPK1P58107 5090 aaKnown RBP1.42□□□□□ -2.18
SCN3A-207ENST00000471697 JMJD1CQ15652 2540 aa1.42□□□□□ -2.18
SCN3A-207ENST00000471697 BOD1L1Q8NFC6 3051 aa1.42□□□□□ -2.18
SCN3A-207ENST00000471697 SPTAN1Q13813 2472 aaKnown RBP1.42□□□□□ -2.18
SCN3A-207ENST00000471697 WDFY3Q8IZQ1 3526 aa1.41□□□□□ -2.18
SCN3A-207ENST00000471697 CACNA1HO95180 2353 aa1.41□□□□□ -2.18
SCN3A-207ENST00000471697 Q9Y3F1 56 aa1.41□□□□□ -2.18
SCN3A-207ENST00000471697 GVINP1Q7Z2Y8 2422 aa1.41□□□□□ -2.18
SCN3A-207ENST00000471697 HIVEP2P31629 2446 aa1.4□□□□□ -2.18
SCN3A-207ENST00000471697 NBEAQ8NFP9 2946 aa1.4□□□□□ -2.18
SCN3A-207ENST00000471697 LAMA5O15230 3695 aa1.4□□□□□ -2.19
SCN3A-207ENST00000471697 VPS13AQ96RL7 3174 aa1.4□□□□□ -2.19
SCN3A-207ENST00000471697 LELP1Q5T871 98 aa1.4□□□□□ -2.19
SCN3A-207ENST00000471697 S4R3F8 94 aa1.4□□□□□ -2.19
SCN3A-207ENST00000471697 CSMD1Q96PZ7 3565 aa1.39□□□□□ -2.19
SCN3A-207ENST00000471697 FBN1P35555 2871 aaKnown RBP1.39□□□□□ -2.19
SCN3A-207ENST00000471697 DEFB108BQ8NET1 73 aa1.39□□□□□ -2.19
SCN3A-207ENST00000471697 PRO0255Q9UI72 69 aa1.39□□□□□ -2.19
SCN3A-207ENST00000471697 KMT2CQ8NEZ4 4911 aaKnown RBP1.39□□□□□ -2.19
SCN3A-207ENST00000471697 WDR87Q6ZQQ6 2873 aa1.38□□□□□ -2.19
SCN3A-207ENST00000471697 KIAA1109Q2LD37 5005 aa1.38□□□□□ -2.19
SCN3A-207ENST00000471697 FREM2Q5SZK8 3169 aa1.38□□□□□ -2.19
SCN3A-207ENST00000471697 SPENQ96T58 3664 aaKnown RBP1.38□□□□□ -2.19
SCN3A-207ENST00000471697 KRTAP12-1P59990 96 aa1.38□□□□□ -2.19
SCN3A-207ENST00000471697 DEFB110Q30KQ9 67 aa1.38□□□□□ -2.19
SCN3A-207ENST00000471697 KRTAP21-3Q3LHN1 58 aa1.38□□□□□ -2.19
SCN3A-207ENST00000471697 DSPP15924 2871 aaKnown RBP1.38□□□□□ -2.19
SCN3A-207ENST00000471697 TENM2Q9NT68 2774 aa1.37□□□□□ -2.19
SCN3A-207ENST00000471697 TRIOO75962 3097 aa1.37□□□□□ -2.19
SCN3A-207ENST00000471697 COL12A1Q99715 3063 aa1.37□□□□□ -2.19
SCN3A-207ENST00000471697 APC2O95996 2303 aa1.37□□□□□ -2.19
SCN3A-207ENST00000471697 KRTAP10-10P60014 251 aa1.37□□□□□ -2.19
SCN3A-207ENST00000471697 KRTAP6-3Q3LI67 103 aa1.37□□□□□ -2.19
SCN3A-207ENST00000471697 NBEAL2Q6ZNJ1 2754 aa1.36□□□□□ -2.19
SCN3A-207ENST00000471697 RYR2Q92736 4967 aa1.36□□□□□ -2.19
SCN3A-207ENST00000471697 SPINK1P00995 79 aa1.36□□□□□ -2.19
SCN3A-207ENST00000471697 HTN1P15515 57 aa1.36□□□□□ -2.19
SCN3A-207ENST00000471697 PDZD2O15018 2839 aa1.36□□□□□ -2.19
SCN3A-207ENST00000471697 NF1P21359 2839 aa1.35□□□□□ -2.19
SCN3A-207ENST00000471697 EP300Q09472 2414 aaPredicted RBP1.35□□□□□ -2.19
SCN3A-207ENST00000471697 CREBBPQ92793 2442 aa1.35□□□□□ -2.19
SCN3A-207ENST00000471697 IGSF10Q6WRI0 2623 aa1.35□□□□□ -2.19
SCN3A-207ENST00000471697 DEFB1P60022 68 aa1.35□□□□□ -2.19
SCN3A-207ENST00000471697 CELSR1Q9NYQ6 3014 aa1.35□□□□□ -2.19
SCN3A-207ENST00000471697 ITPR1Q14643 2758 aa1.35□□□□□ -2.19
SCN3A-207ENST00000471697 TLN1Q9Y490 2541 aaKnown RBP1.34□□□□□ -2.19
SCN3A-207ENST00000471697 M0QZ58 72 aa1.34□□□□□ -2.19
SCN3A-207ENST00000471697 NBEAL1Q6ZS30 2694 aa1.34□□□□□ -2.2
SCN3A-207ENST00000471697 ATRQ13535 2644 aa1.33□□□□□ -2.2
SCN3A-207ENST00000471697 OTOGQ6ZRI0 2925 aa1.33□□□□□ -2.2
SCN3A-207ENST00000471697 HMCN1Q96RW7 5635 aa1.33□□□□□ -2.2
SCN3A-207ENST00000471697 FRYLO94915 3013 aa1.33□□□□□ -2.2
SCN3A-207ENST00000471697 DMXL2Q8TDJ6 3036 aa1.33□□□□□ -2.2
SCN3A-207ENST00000471697 PKD1L1Q8TDX9 2849 aa1.33□□□□□ -2.2
SCN3A-207ENST00000471697 LRRK2Q5S007 2527 aa1.32□□□□□ -2.2
SCN3A-207ENST00000471697 SRRM2Q9UQ35 2752 aaKnown RBP1.32□□□□□ -2.2
SCN3A-207ENST00000471697 NOTCH1P46531 2555 aa1.32□□□□□ -2.2
SCN3A-207ENST00000471697 FLNAP21333 2647 aaKnown RBP1.32□□□□□ -2.2
SCN3A-207ENST00000471697 HERC2O95714 4834 aa1.31□□□□□ -2.2
SCN3A-207ENST00000471697 CHD9Q3L8U1 2897 aa1.31□□□□□ -2.2
SCN3A-207ENST00000471697 COL6A5A8TX70 2615 aa1.31□□□□□ -2.2
SCN3A-207ENST00000471697 KRTAP13-1Q8IUC0 172 aa1.31□□□□□ -2.2
SCN3A-207ENST00000471697 CCDC168Q8NDH2 2452 aa1.31□□□□□ -2.2
SCN3A-207ENST00000471697 AKAP9Q99996 3911 aa1.31□□□□□ -2.2
SCN3A-207ENST00000471697 FLNCQ14315 2725 aa1.31□□□□□ -2.2
SCN3A-207ENST00000471697 PRRC2CQ9Y520 2896 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms