RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
GCOM1-206ENST00000471563 Q8N9P0 234 aaPredicted RBP9.17□□□□□ -0.94
GCOM1-206ENST00000471563 RYR2Q92736 4967 aa9.17□□□□□ -0.94
GCOM1-206ENST00000471563 LIMD2Q9BT23 127 aa9.17□□□□□ -0.94
GCOM1-206ENST00000471563 Q6ZSA8 131 aa9.14□□□□□ -0.95
GCOM1-206ENST00000471563 IGLV7-46A0A075B6I9 117 aa9.13□□□□□ -0.95
GCOM1-206ENST00000471563 PMAIP1Q13794 54 aa9.12□□□□□ -0.95
GCOM1-206ENST00000471563 ASB16-AS1Q495Z4 193 aa9.12□□□□□ -0.95
GCOM1-206ENST00000471563 Q96NJ1 140 aa9.11□□□□□ -0.95
GCOM1-206ENST00000471563 ZNF861PO60384 105 aa9.11□□□□□ -0.95
GCOM1-206ENST00000471563 COA5Q86WW8 74 aa9.11□□□□□ -0.95
GCOM1-206ENST00000471563 MOBPQ13875 183 aa9.1□□□□□ -0.95
GCOM1-206ENST00000471563 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
GCOM1-206ENST00000471563 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
GCOM1-206ENST00000471563 ANAPC11Q9NYG5 84 aa9.1□□□□□ -0.95
GCOM1-206ENST00000471563 CHKB-CPT1BH3BT56 60 aa9.09□□□□□ -0.95
GCOM1-206ENST00000471563 IGLV7-43P04211 117 aa9.08□□□□□ -0.96
GCOM1-206ENST00000471563 IGLV9-49A0A0B4J1Y8 123 aa9.07□□□□□ -0.96
GCOM1-206ENST00000471563 A8MU10 97 aa9.07□□□□□ -0.96
GCOM1-206ENST00000471563 DYNC1H1Q14204 4646 aaKnown RBP9.07□□□□□ -0.96
GCOM1-206ENST00000471563 C8orf17Q9NRJ1 99 aa9.06□□□□□ -0.96
GCOM1-206ENST00000471563 LOC101927531A0A1B0GV80 90 aa9.06□□□□□ -0.96
GCOM1-206ENST00000471563 SEC61GP60059 68 aa9.06□□□□□ -0.96
GCOM1-206ENST00000471563 CD164Q04900 197 aa9.06□□□□□ -0.96
GCOM1-206ENST00000471563 Q75L30 129 aa9.06□□□□□ -0.96
GCOM1-206ENST00000471563 VPS13BQ7Z7G8 4022 aa9.05□□□□□ -0.96
GCOM1-206ENST00000471563 LINC00483Q53H64 154 aa9.05□□□□□ -0.96
GCOM1-206ENST00000471563 PCOTHQ58A44 107 aa9.04□□□□□ -0.96
GCOM1-206ENST00000471563 ZNF706Q9Y5V0 76 aaPredicted RBP9.01□□□□□ -0.97
GCOM1-206ENST00000471563 A0A1B0GVX0 72 aa9.01□□□□□ -0.97
GCOM1-206ENST00000471563 A0A1B0GVY2 172 aa8.99□□□□□ -0.97
GCOM1-206ENST00000471563 IGHV6-1A0A0B4J1U7 121 aa8.98□□□□□ -0.97
GCOM1-206ENST00000471563 RYR3Q15413 4870 aa8.98□□□□□ -0.97
GCOM1-206ENST00000471563 A6NED7 52 aa8.97□□□□□ -0.97
GCOM1-206ENST00000471563 NDUFS5O43920 106 aa8.97□□□□□ -0.97
GCOM1-206ENST00000471563 LCA10Q71F78 164 aa8.97□□□□□ -0.97
GCOM1-206ENST00000471563 LINC01558Q9Y6Z2 57 aa8.97□□□□□ -0.97
GCOM1-206ENST00000471563 MRPL34Q9BQ48 92 aaKnown RBP8.96□□□□□ -0.97
GCOM1-206ENST00000471563 CDK2AP2O75956 126 aa8.96□□□□□ -0.98
GCOM1-206ENST00000471563 ATP11AUNQ6ZP68 121 aa8.94□□□□□ -0.98
GCOM1-206ENST00000471563 APOBP04114 4563 aaKnown RBP8.93□□□□□ -0.98
GCOM1-206ENST00000471563 HRES1P13985 223 aa8.92□□□□□ -0.98
GCOM1-206ENST00000471563 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
GCOM1-206ENST00000471563 SPTSSBQ8NFR3 76 aa8.92□□□□□ -0.98
GCOM1-206ENST00000471563 CDC42SE1Q9NRR8 79 aa8.92□□□□□ -0.98
GCOM1-206ENST00000471563 FAT1Q14517 4588 aa8.91□□□□□ -0.98
GCOM1-206ENST00000471563 SMR3BP02814 79 aaPredicted RBP8.9□□□□□ -0.98
GCOM1-206ENST00000471563 A0A087X002 238 aa8.89□□□□□ -0.99
GCOM1-206ENST00000471563 NOTCH2NLQ7Z3S9 236 aa8.89□□□□□ -0.99
GCOM1-206ENST00000471563 KTN1-AS1Q86SY8 53 aa8.89□□□□□ -0.99
GCOM1-206ENST00000471563 A6NN06 94 aa8.85□□□□□ -0.99
GCOM1-206ENST00000471563 KRTAP1-4P0C5Y4 121 aa8.84□□□□□ -0.99
GCOM1-206ENST00000471563 KRTAP13-2Q52LG2 175 aa8.84□□□□□ -0.99
GCOM1-206ENST00000471563 KRTAP13-3Q3SY46 172 aa8.84□□□□□ -0.99
GCOM1-206ENST00000471563 Q5W150 140 aa8.81□□□□□ -1
GCOM1-206ENST00000471563 SPINK7P58062 85 aa8.8□□□□□ -1
GCOM1-206ENST00000471563 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
GCOM1-206ENST00000471563 SSBP3-AS1Q7Z2R9 100 aa8.78□□□□□ -1
GCOM1-206ENST00000471563 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1.01
GCOM1-206ENST00000471563 PRR26Q8N8Z3 221 aa8.75□□□□□ -1.01
GCOM1-206ENST00000471563 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
GCOM1-206ENST00000471563 KRTAP10-4P60372 401 aaPredicted RBP8.75□□□□□ -1.01
GCOM1-206ENST00000471563 ACYP2P14621 99 aa8.74□□□□□ -1.01
GCOM1-206ENST00000471563 C7orf65Q6ZTY9 151 aa8.71□□□□□ -1.01
GCOM1-206ENST00000471563 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.01
GCOM1-206ENST00000471563 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
GCOM1-206ENST00000471563 TYMSOSQ8TAI1 123 aa8.68□□□□□ -1.02
GCOM1-206ENST00000471563 HSPG2P98160 4391 aa8.68□□□□□ -1.02
GCOM1-206ENST00000471563 RYR1P21817 5038 aa8.67□□□□□ -1.02
GCOM1-206ENST00000471563 EPPK1P58107 5090 aaKnown RBP8.66□□□□□ -1.02
GCOM1-206ENST00000471563 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
GCOM1-206ENST00000471563 LINC00313P59037 77 aa8.64□□□□□ -1.03
GCOM1-206ENST00000471563 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
GCOM1-206ENST00000471563 IGKV2-30P06310 120 aa8.61□□□□□ -1.03
GCOM1-206ENST00000471563 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
GCOM1-206ENST00000471563 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
GCOM1-206ENST00000471563 LRP1Q07954 4544 aaKnown RBP8.58□□□□□ -1.04
GCOM1-206ENST00000471563 RETNLBQ9BQ08 111 aa8.57□□□□□ -1.04
GCOM1-206ENST00000471563 A0A1B0GU69 56 aa8.57□□□□□ -1.04
GCOM1-206ENST00000471563 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
GCOM1-206ENST00000471563 LINC00304Q8N9R0 145 aa8.56□□□□□ -1.04
GCOM1-206ENST00000471563 Q5VSD8 79 aa8.55□□□□□ -1.04
GCOM1-206ENST00000471563 SPINK1P00995 79 aa8.55□□□□□ -1.04
GCOM1-206ENST00000471563 KRTAP16-1A8MUX0 517 aa8.54□□□□□ -1.04
GCOM1-206ENST00000471563 SPATA8Q6RVD6 105 aa8.52□□□□□ -1.05
GCOM1-206ENST00000471563 TNXBP22105 4242 aa8.46□□□□□ -1.06
GCOM1-206ENST00000471563 FLG2Q5D862 2391 aaPredicted RBP8.45□□□□□ -1.06
GCOM1-206ENST00000471563 IGKV2D-30A0A075B6S6 120 aa8.45□□□□□ -1.06
GCOM1-206ENST00000471563 UQCR11O14957 56 aa8.45□□□□□ -1.06
GCOM1-206ENST00000471563 MIR22HGQ0VDD5 57 aa8.45□□□□□ -1.06
GCOM1-206ENST00000471563 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
GCOM1-206ENST00000471563 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
GCOM1-206ENST00000471563 PRAC1Q96KF2 57 aa8.42□□□□□ -1.06
GCOM1-206ENST00000471563 FAT3Q8TDW7 4589 aa8.42□□□□□ -1.06
GCOM1-206ENST00000471563 Q8N1X5 172 aa8.41□□□□□ -1.06
GCOM1-206ENST00000471563 ADM2Q7Z4H4 148 aa8.38□□□□□ -1.07
GCOM1-206ENST00000471563 KRTAP10-8P60410 259 aa8.36□□□□□ -1.07
GCOM1-206ENST00000471563 DMBT1Q9UGM3 2413 aaPredicted RBP8.32□□□□□ -1.08
GCOM1-206ENST00000471563 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
GCOM1-206ENST00000471563 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms